RNA–Protein interactions for RNA: ENST00000540975.5

YBX3-210, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-210ENST00000540975 KIF5CO60282 957 aa4.79□□□□□ -1.64
YBX3-210ENST00000540975 MTRF1O75570 445 aaKnown RBP4.79□□□□□ -1.64
YBX3-210ENST00000540975 RPLP0P05388 317 aaKnown RBP4.79□□□□□ -1.64
YBX3-210ENST00000540975 PCP11498 1178 aaKnown RBP4.79□□□□□ -1.64
YBX3-210ENST00000540975 PDGFRAP16234 1089 aa4.79□□□□□ -1.64
YBX3-210ENST00000540975 C4BPBP20851 252 aa4.79□□□□□ -1.64
YBX3-210ENST00000540975 SSTR1P30872 391 aa4.79□□□□□ -1.64
YBX3-210ENST00000540975 GPR183P32249 361 aa4.79□□□□□ -1.64
YBX3-210ENST00000540975 NAGLUP54802 743 aa4.79□□□□□ -1.64
YBX3-210ENST00000540975 FAM182AQ5T1J6 154 aa4.79□□□□□ -1.64
YBX3-210ENST00000540975 ZNF841Q6ZN19 808 aa4.79□□□□□ -1.64
YBX3-210ENST00000540975 ALKBH7Q9BT30 221 aaPredicted RBP4.79□□□□□ -1.64
YBX3-210ENST00000540975 EXOC1Q9NV70 894 aa4.79□□□□□ -1.64
YBX3-210ENST00000540975 GTSE1Q9NYZ3 720 aa4.79□□□□□ -1.64
YBX3-210ENST00000540975 RUVBL2Q9Y230 463 aaKnown RBP4.79□□□□□ -1.64
YBX3-210ENST00000540975 MRPS18CQ9Y3D5 142 aaKnown RBP4.79□□□□□ -1.64
YBX3-210ENST00000540975 KLK4Q9Y5K2 254 aa4.79□□□□□ -1.64
YBX3-210ENST00000540975 ADAMTS9Q9P2N4 1935 aa4.79□□□□□ -1.64
YBX3-210ENST00000540975 A0A087WV48 116 aa4.78□□□□□ -1.64
YBX3-210ENST00000540975 TSPY2A6NKD2 308 aa4.78□□□□□ -1.64
YBX3-210ENST00000540975 SHISA9B4DS77 424 aa4.78□□□□□ -1.64
YBX3-210ENST00000540975 NPIPA3F8WFD2 350 aa4.78□□□□□ -1.64
YBX3-210ENST00000540975 BCL2L11O43521 198 aa4.78□□□□□ -1.64
YBX3-210ENST00000540975 MT-ND2P03891 347 aa4.78□□□□□ -1.64
YBX3-210ENST00000540975 FOLR2P14207 255 aa4.78□□□□□ -1.64
YBX3-210ENST00000540975 PIK3R1P27986 724 aa4.78□□□□□ -1.64
YBX3-210ENST00000540975 PSMB4P28070 264 aa4.78□□□□□ -1.64
YBX3-210ENST00000540975 BTG1P62324 171 aa4.78□□□□□ -1.64
YBX3-210ENST00000540975 KIAA0141Q14154 515 aaPredicted RBP4.78□□□□□ -1.64
YBX3-210ENST00000540975 KCTD2Q14681 263 aa4.78□□□□□ -1.64
YBX3-210ENST00000540975 HIGD2BQ4VC39 106 aa4.78□□□□□ -1.64
YBX3-210ENST00000540975 ZNF542PQ5EBM4 170 aa4.78□□□□□ -1.64
YBX3-210ENST00000540975 SPANXN4Q5MJ08 99 aa4.78□□□□□ -1.64
YBX3-210ENST00000540975 COX8CQ7Z4L0 72 aa4.78□□□□□ -1.64
YBX3-210ENST00000540975 GPR141Q7Z602 305 aa4.78□□□□□ -1.64
YBX3-210ENST00000540975 DNAJB7Q7Z6W7 309 aaPredicted RBP4.78□□□□□ -1.64
YBX3-210ENST00000540975 HEXDCQ8WVB3 486 aa4.78□□□□□ -1.64
YBX3-210ENST00000540975 TOMM40LQ969M1 308 aa4.78□□□□□ -1.64
YBX3-210ENST00000540975 LURAP1Q96LR2 239 aa4.78□□□□□ -1.64
YBX3-210ENST00000540975 ATF6BQ99941 703 aa4.78□□□□□ -1.64
YBX3-210ENST00000540975 MGME1Q9BQP7 344 aa4.78□□□□□ -1.64
YBX3-210ENST00000540975 PAPOLGQ9BWT3 736 aaKnown RBP4.78□□□□□ -1.64
YBX3-210ENST00000540975 PFDN4Q9NQP4 134 aa4.78□□□□□ -1.64
YBX3-210ENST00000540975 KLK11Q9UBX7 282 aa4.78□□□□□ -1.64
YBX3-210ENST00000540975 CFDP1Q9UEE9 299 aaPredicted RBP4.78□□□□□ -1.64
YBX3-210ENST00000540975 PLCL2Q9UPR0 1127 aa4.78□□□□□ -1.64
YBX3-210ENST00000540975 FLRT2O43155 660 aa4.77□□□□□ -1.65
YBX3-210ENST00000540975 FCGR3BO75015 233 aa4.77□□□□□ -1.65
YBX3-210ENST00000540975 GIFP27352 417 aa4.77□□□□□ -1.65
YBX3-210ENST00000540975 PKLRP30613 574 aa4.77□□□□□ -1.65
YBX3-210ENST00000540975 ZFP36L2P47974 494 aaKnown RBP4.77□□□□□ -1.65
YBX3-210ENST00000540975 NPY4RP50391 375 aa4.77□□□□□ -1.65
YBX3-210ENST00000540975 PRELPP51888 382 aa4.77□□□□□ -1.65
YBX3-210ENST00000540975 PTENP60484 403 aa4.77□□□□□ -1.65
YBX3-210ENST00000540975 SPOUT1Q5T280 376 aaKnown RBP4.77□□□□□ -1.65
YBX3-210ENST00000540975 CASC1Q6TDU7 716 aa4.77□□□□□ -1.65
YBX3-210ENST00000540975 MACC1Q6ZN28 852 aa4.77□□□□□ -1.65
YBX3-210ENST00000540975 Q6ZR54 194 aa4.77□□□□□ -1.65
YBX3-210ENST00000540975 TIPARPQ7Z3E1 657 aaKnown RBP4.77□□□□□ -1.65
YBX3-210ENST00000540975 SH2D6Q7Z4S9 175 aa4.77□□□□□ -1.65
YBX3-210ENST00000540975 SLC25A42Q86VD7 318 aa4.77□□□□□ -1.65
YBX3-210ENST00000540975 RNF130Q86XS8 419 aa4.77□□□□□ -1.65
YBX3-210ENST00000540975 CROCCP3Q8IVE0 287 aa4.77□□□□□ -1.65
YBX3-210ENST00000540975 OR4N5Q8IXE1 308 aa4.77□□□□□ -1.65
YBX3-210ENST00000540975 CCDC185Q8N715 623 aa4.77□□□□□ -1.65
YBX3-210ENST00000540975 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.77□□□□□ -1.65
YBX3-210ENST00000540975 NCOA7Q8NI08 942 aa4.77□□□□□ -1.65
YBX3-210ENST00000540975 GRK7Q8WTQ7 553 aa4.77□□□□□ -1.65
YBX3-210ENST00000540975 SSC4DQ8WTU2 575 aa4.77□□□□□ -1.65
YBX3-210ENST00000540975 SIPA1Q96FS4 1042 aa4.77□□□□□ -1.65
YBX3-210ENST00000540975 AK8Q96MA6 479 aa4.77□□□□□ -1.65
YBX3-210ENST00000540975 IL1RAPQ9NPH3 570 aa4.77□□□□□ -1.65
YBX3-210ENST00000540975 GPR83Q9NYM4 423 aa4.77□□□□□ -1.65
YBX3-210ENST00000540975 E5RGE8 158 aa4.76□□□□□ -1.65
YBX3-210ENST00000540975 FAM86B1E9PN63 330 aa4.76□□□□□ -1.65
YBX3-210ENST00000540975 CCER2I3L3R5 266 aa4.76□□□□□ -1.65
YBX3-210ENST00000540975 GALR3O60755 368 aaPredicted RBP4.76□□□□□ -1.65
YBX3-210ENST00000540975 DKC1O60832 514 aaKnown RBP eCLIP4.76□□□□□ -1.65
YBX3-210ENST00000540975 LRCH4O75427 683 aa4.76□□□□□ -1.65
YBX3-210ENST00000540975 PGLSO95336 258 aa4.76□□□□□ -1.65
YBX3-210ENST00000540975 GBAP04062 536 aa4.76□□□□□ -1.65
YBX3-210ENST00000540975 FAM86B2P0C5J1 330 aa4.76□□□□□ -1.65
YBX3-210ENST00000540975 ADRA2CP18825 462 aa4.76□□□□□ -1.65
YBX3-210ENST00000540975 UPP1Q16831 310 aa4.76□□□□□ -1.65
YBX3-210ENST00000540975 FAM91A1Q658Y4 838 aa4.76□□□□□ -1.65
YBX3-210ENST00000540975 TEX26Q8N6G2 289 aa4.76□□□□□ -1.65
YBX3-210ENST00000540975 OR9Q2Q8NGE9 314 aa4.76□□□□□ -1.65
YBX3-210ENST00000540975 OR5M9Q8NGP3 310 aa4.76□□□□□ -1.65
YBX3-210ENST00000540975 SPPL2AQ8TCT8 520 aa4.76□□□□□ -1.65
YBX3-210ENST00000540975 BAG1Q99933 345 aaPredicted RBP4.76□□□□□ -1.65
YBX3-210ENST00000540975 RPF1Q9H9Y2 349 aaKnown RBP4.76□□□□□ -1.65
YBX3-210ENST00000540975 PRR34Q9NV39 138 aa4.76□□□□□ -1.65
YBX3-210ENST00000540975 FAM120CQ9NX05 1096 aaKnown RBP4.76□□□□□ -1.65
YBX3-210ENST00000540975 NSG2Q9Y328 171 aa4.76□□□□□ -1.65
YBX3-210ENST00000540975 STYXL1Q9Y6J8 313 aa4.76□□□□□ -1.65
YBX3-210ENST00000540975 FANCIQ9NVI1 1328 aa4.75□□□□□ -1.65
YBX3-210ENST00000540975 ARHGEF33A8MVX0 844 aa4.75□□□□□ -1.65
YBX3-210ENST00000540975 PPIP5K2O43314 1243 aa4.75□□□□□ -1.65
YBX3-210ENST00000540975 MOCS2O96007 188 aaPredicted RBP4.75□□□□□ -1.65
YBX3-210ENST00000540975 C9P02748 559 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 119 ms