RNA–Protein interactions for RNA: ENST00000540963.1

CHFR-218, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 875 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-218ENST00000540963 TP63Q9H3D4 680 aaPredicted RBP25.1■■□□□ 1.61
CHFR-218ENST00000540963 NPDC1Q9NQX5 325 aaPredicted RBP25.1■■□□□ 1.61
CHFR-218ENST00000540963 PLSCR2Q9NRY7 297 aa25.1■■□□□ 1.61
CHFR-218ENST00000540963 KCNN3Q9UGI6 736 aa25.1■■□□□ 1.61
CHFR-218ENST00000540963 FAM237BA0A1B0GVD1 139 aa25.09■■□□□ 1.61
CHFR-218ENST00000540963 FEZF1A0PJY2 475 aa25.09■■□□□ 1.61
CHFR-218ENST00000540963 MAGEB16A2A368 324 aa25.09■■□□□ 1.61
CHFR-218ENST00000540963 GALR3O60755 368 aaPredicted RBP25.09■■□□□ 1.61
CHFR-218ENST00000540963 MSX1P28360 303 aa25.09■■□□□ 1.61
CHFR-218ENST00000540963 ART1P52961 327 aa25.09■■□□□ 1.61
CHFR-218ENST00000540963 PWP1Q13610 501 aa25.09■■□□□ 1.61
CHFR-218ENST00000540963 KCTD19Q17RG1 926 aaPredicted RBP25.09■■□□□ 1.61
CHFR-218ENST00000540963 ZNF549Q6P9A3 640 aa25.09■■□□□ 1.61
CHFR-218ENST00000540963 LCTLQ6UWM7 567 aa25.09■■□□□ 1.61
CHFR-218ENST00000540963 QSOX2Q6ZRP7 698 aa25.09■■□□□ 1.61
CHFR-218ENST00000540963 MARVELD2Q8N4S9 558 aa25.09■■□□□ 1.61
CHFR-218ENST00000540963 RND1Q92730 232 aa25.09■■□□□ 1.61
CHFR-218ENST00000540963 GPR21Q99679 349 aa25.09■■□□□ 1.61
CHFR-218ENST00000540963 SGPP1Q9BX95 441 aa25.09■■□□□ 1.61
CHFR-218ENST00000540963 SAGE2PA6NJ88 616 aa25.08■■□□□ 1.61
CHFR-218ENST00000540963 PRMT3O60678 531 aa25.08■■□□□ 1.61
CHFR-218ENST00000540963 TFEBP19484 476 aa25.08■■□□□ 1.61
CHFR-218ENST00000540963 MEOX1P50221 254 aa25.08■■□□□ 1.61
CHFR-218ENST00000540963 ARHGAP11AQ6P4F7 1023 aa25.08■■□□□ 1.61
CHFR-218ENST00000540963 CEP128Q6ZU80 1094 aa25.08■■□□□ 1.61
CHFR-218ENST00000540963 STRA8Q7Z7C7 330 aa25.08■■□□□ 1.61
CHFR-218ENST00000540963 SULF2Q8IWU5 870 aa25.08■■□□□ 1.61
CHFR-218ENST00000540963 ZFP62Q8NB50 900 aaPredicted RBP25.08■■□□□ 1.61
CHFR-218ENST00000540963 ABHD11Q8NFV4 315 aa25.08■■□□□ 1.61
CHFR-218ENST00000540963 OR5T3Q8NGG3 340 aa25.08■■□□□ 1.61
CHFR-218ENST00000540963 HAUS8Q9BT25 410 aa25.08■■□□□ 1.61
CHFR-218ENST00000540963 KCNJ16Q9NPI9 418 aa25.08■■□□□ 1.61
CHFR-218ENST00000540963 SAMD15Q9P1V8 674 aa25.08■■□□□ 1.61
CHFR-218ENST00000540963 SH2B3Q9UQQ2 575 aa25.08■■□□□ 1.61
CHFR-218ENST00000540963 NAV3Q8IVL0 2385 aa25.07■■□□□ 1.6
CHFR-218ENST00000540963 ZNF860A6NHJ4 632 aa25.07■■□□□ 1.6
CHFR-218ENST00000540963 USP27XA6NNY8 438 aa25.07■■□□□ 1.6
CHFR-218ENST00000540963 TOXO94900 526 aa25.07■■□□□ 1.6
CHFR-218ENST00000540963 C8GP07360 202 aa25.07■■□□□ 1.6
CHFR-218ENST00000540963 HOXD4P09016 255 aaPredicted RBP25.07■■□□□ 1.6
CHFR-218ENST00000540963 ALOX12P18054 663 aa25.07■■□□□ 1.6
CHFR-218ENST00000540963 MAGEA6P43360 314 aa25.07■■□□□ 1.6
CHFR-218ENST00000540963 SP140Q13342 867 aa25.07■■□□□ 1.6
CHFR-218ENST00000540963 THOC5Q13769 683 aaKnown RBP25.07■■□□□ 1.6
CHFR-218ENST00000540963 DHX34Q14147 1143 aaKnown RBP25.07■■□□□ 1.6
CHFR-218ENST00000540963 CMPK2Q5EBM0 449 aa25.07■■□□□ 1.6
CHFR-218ENST00000540963 CES4AQ5XG92 561 aa25.07■■□□□ 1.6
CHFR-218ENST00000540963 AGTRAPQ6RW13 159 aa25.07■■□□□ 1.6
CHFR-218ENST00000540963 PIWIL4Q7Z3Z4 852 aaKnown RBP25.07■■□□□ 1.6
CHFR-218ENST00000540963 CPNE9Q8IYJ1 553 aa25.07■■□□□ 1.6
CHFR-218ENST00000540963 ZNF740Q8NDX6 193 aa25.07■■□□□ 1.6
CHFR-218ENST00000540963 OR4K1Q8NGD4 311 aa25.07■■□□□ 1.6
CHFR-218ENST00000540963 MAIP1Q8WWC4 291 aa25.07■■□□□ 1.6
CHFR-218ENST00000540963 ZNF559Q9BR84 538 aa25.07■■□□□ 1.6
CHFR-218ENST00000540963 RNF6Q9Y252 685 aa25.07■■□□□ 1.6
CHFR-218ENST00000540963 HRH3Q9Y5N1 445 aa25.07■■□□□ 1.6
CHFR-218ENST00000540963 NIPBLQ6KC79 2804 aaeCLIP25.06■■□□□ 1.6
CHFR-218ENST00000540963 TCRBV7S3A2A0A539 114 aa25.06■■□□□ 1.6
CHFR-218ENST00000540963 CHST10O43529 356 aa25.06■■□□□ 1.6
CHFR-218ENST00000540963 CASC4Q6P4E1 433 aa25.06■■□□□ 1.6
CHFR-218ENST00000540963 DENND6AQ8IWF6 608 aa25.06■■□□□ 1.6
CHFR-218ENST00000540963 NFAM1Q8NET5 270 aaPredicted RBP25.06■■□□□ 1.6
CHFR-218ENST00000540963 PTCHD1Q96NR3 888 aa25.06■■□□□ 1.6
CHFR-218ENST00000540963 TMUB1Q9BVT8 246 aa25.06■■□□□ 1.6
CHFR-218ENST00000540963 DEFB126Q9BYW3 111 aa25.06■■□□□ 1.6
CHFR-218ENST00000540963 PARVBQ9HBI1 364 aa25.06■■□□□ 1.6
CHFR-218ENST00000540963 FBXO6Q9NRD1 293 aaPredicted RBP25.06■■□□□ 1.6
CHFR-218ENST00000540963 PDE10AQ9Y233 779 aa25.06■■□□□ 1.6
CHFR-218ENST00000540963 TCRBV16S1A1N1A0A5B0 115 aa25.05■■□□□ 1.6
CHFR-218ENST00000540963 SLC16A5O15375 505 aa25.05■■□□□ 1.6
CHFR-218ENST00000540963 NDUFS4O43181 175 aa25.05■■□□□ 1.6
CHFR-218ENST00000540963 PEX1O43933 1283 aa25.05■■□□□ 1.6
CHFR-218ENST00000540963 HS6ST1O60243 411 aa25.05■■□□□ 1.6
CHFR-218ENST00000540963 CDH1P12830 882 aa25.05■■□□□ 1.6
CHFR-218ENST00000540963 NPPBP16860 134 aa25.05■■□□□ 1.6
CHFR-218ENST00000540963 CCR8P51685 355 aa25.05■■□□□ 1.6
CHFR-218ENST00000540963 CTBP1Q13363 440 aa25.05■■□□□ 1.6
CHFR-218ENST00000540963 DEFB134Q4QY38 66 aa25.05■■□□□ 1.6
CHFR-218ENST00000540963 UGT3A1Q6NUS8 523 aa25.05■■□□□ 1.6
CHFR-218ENST00000540963 KIAA0408Q6ZU52 694 aa25.05■■□□□ 1.6
CHFR-218ENST00000540963 ACAD11Q709F0 780 aa25.05■■□□□ 1.6
CHFR-218ENST00000540963 TBC1D19Q8N5T2 526 aa25.05■■□□□ 1.6
CHFR-218ENST00000540963 CALML6Q8TD86 181 aa25.05■■□□□ 1.6
CHFR-218ENST00000540963 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP25.04■■□□□ 1.6
CHFR-218ENST00000540963 IGKV3D-11A0A0A0MRZ8 115 aa25.04■■□□□ 1.6
CHFR-218ENST00000540963 TRBC2A0A5B9 178 aa25.04■■□□□ 1.6
CHFR-218ENST00000540963 AVILO75366 819 aa25.04■■□□□ 1.6
CHFR-218ENST00000540963 MLNP12872 115 aa25.04■■□□□ 1.6
CHFR-218ENST00000540963 NAE1Q13564 534 aa25.04■■□□□ 1.6
CHFR-218ENST00000540963 PAOXQ6QHF9 649 aa25.04■■□□□ 1.6
CHFR-218ENST00000540963 ABHD13Q7L211 337 aa25.04■■□□□ 1.6
CHFR-218ENST00000540963 PALM2Q8IXS6 379 aa25.04■■□□□ 1.6
CHFR-218ENST00000540963 CYP4X1Q8N118 509 aa25.04■■□□□ 1.6
CHFR-218ENST00000540963 ZNF669Q96BR6 464 aaPredicted RBP25.04■■□□□ 1.6
CHFR-218ENST00000540963 PRDM9Q9NQV7 894 aa25.04■■□□□ 1.6
CHFR-218ENST00000540963 DNAJC13O75165 2243 aa25.03■■□□□ 1.6
CHFR-218ENST00000540963 ZNF407Q9C0G0 2248 aa25.03■■□□□ 1.6
CHFR-218ENST00000540963 ZCWPW2A0A1B0GU75 182 aa25.03■■□□□ 1.6
CHFR-218ENST00000540963 CEP104O60308 925 aa25.03■■□□□ 1.6
CHFR-218ENST00000540963 CDC40O60508 579 aaKnown RBP eCLIP25.03■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms