RNA–Protein interactions for RNA: ENST00000540906.1

AP003559.1-201, humanhuman

TSL 3 BASIC

Gene AP003559.1, Length 1,831 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003559.1-201ENST00000540906 SRSF11Q05519 484 aaKnown RBP11.72□□□□□ -0.53
AP003559.1-201ENST00000540906 C2orf80Q0P641 193 aa11.72□□□□□ -0.53
AP003559.1-201ENST00000540906 GAB1Q13480 694 aa11.72□□□□□ -0.53
AP003559.1-201ENST00000540906 PDE7AQ13946 482 aa11.72□□□□□ -0.53
AP003559.1-201ENST00000540906 DUOXA1Q1HG43 343 aa11.72□□□□□ -0.53
AP003559.1-201ENST00000540906 SFT2D3Q587I9 215 aa11.72□□□□□ -0.53
AP003559.1-201ENST00000540906 CPTPQ5TA50 214 aa11.72□□□□□ -0.53
AP003559.1-201ENST00000540906 TSSK4Q6SA08 328 aa11.72□□□□□ -0.53
AP003559.1-201ENST00000540906 ZNF793Q6ZN11 406 aa11.72□□□□□ -0.53
AP003559.1-201ENST00000540906 PRR23BQ6ZRT6 265 aa11.72□□□□□ -0.53
AP003559.1-201ENST00000540906 CAMKMTQ7Z624 323 aa11.72□□□□□ -0.53
AP003559.1-201ENST00000540906 PARGQ86W56 976 aa11.72□□□□□ -0.53
AP003559.1-201ENST00000540906 PAQR7Q86WK9 346 aa11.72□□□□□ -0.53
AP003559.1-201ENST00000540906 CALHM3Q86XJ0 350 aa11.72□□□□□ -0.53
AP003559.1-201ENST00000540906 TMEFF1Q8IYR6 380 aa11.72□□□□□ -0.53
AP003559.1-201ENST00000540906 ADGRG5Q8IZF4 528 aa11.72□□□□□ -0.53
AP003559.1-201ENST00000540906 FAM9CQ8IZT9 166 aa11.72□□□□□ -0.53
AP003559.1-201ENST00000540906 OR10G6Q8NH81 332 aa11.72□□□□□ -0.53
AP003559.1-201ENST00000540906 C1orf216Q8TAB5 229 aa11.72□□□□□ -0.53
AP003559.1-201ENST00000540906 LRTOMTQ8WZ04 291 aa11.72□□□□□ -0.53
AP003559.1-201ENST00000540906 DUS3LQ96G46 650 aaKnown RBP11.72□□□□□ -0.53
AP003559.1-201ENST00000540906 HSPA12BQ96MM6 686 aa11.72□□□□□ -0.53
AP003559.1-201ENST00000540906 TEFMQ96QE5 360 aaKnown RBP11.72□□□□□ -0.53
AP003559.1-201ENST00000540906 NELL2Q99435 816 aa11.72□□□□□ -0.53
AP003559.1-201ENST00000540906 THUMPD3Q9BV44 507 aaKnown RBP11.72□□□□□ -0.53
AP003559.1-201ENST00000540906 TRIM4Q9C037 500 aa11.72□□□□□ -0.53
AP003559.1-201ENST00000540906 MIR1-1HGQ9H1L0 117 aa11.72□□□□□ -0.53
AP003559.1-201ENST00000540906 SRMSQ9H3Y6 488 aa11.72□□□□□ -0.53
AP003559.1-201ENST00000540906 REEP4Q9H6H4 257 aa11.72□□□□□ -0.53
AP003559.1-201ENST00000540906 MYNNQ9NPC7 610 aa11.72□□□□□ -0.53
AP003559.1-201ENST00000540906 TMEM184CQ9NVA4 438 aa11.72□□□□□ -0.53
AP003559.1-201ENST00000540906 OR6C2Q9NZP2 312 aa11.72□□□□□ -0.53
AP003559.1-201ENST00000540906 APOBEC3BQ9UH17 382 aaKnown RBP11.72□□□□□ -0.53
AP003559.1-201ENST00000540906 SNX13Q9Y5W8 968 aa11.72□□□□□ -0.53
AP003559.1-201ENST00000540906 V9GYQ6 96 aa11.72□□□□□ -0.53
AP003559.1-201ENST00000540906 GOLGA4Q13439 2230 aaKnown RBP11.71□□□□□ -0.53
AP003559.1-201ENST00000540906 C15orf38-AP3S2A0A0A6YYH1 394 aa11.71□□□□□ -0.54
AP003559.1-201ENST00000540906 OR6C74A6NCV1 312 aa11.71□□□□□ -0.54
AP003559.1-201ENST00000540906 WASHC1A8K0Z3 465 aa11.71□□□□□ -0.54
AP003559.1-201ENST00000540906 RFXANKO14593 260 aa11.71□□□□□ -0.54
AP003559.1-201ENST00000540906 CASQ2O14958 399 aaPredicted RBP11.71□□□□□ -0.54
AP003559.1-201ENST00000540906 ERN1O75460 977 aaKnown RBP11.71□□□□□ -0.54
AP003559.1-201ENST00000540906 UGT2B7P16662 529 aa11.71□□□□□ -0.54
AP003559.1-201ENST00000540906 JUNDP17535 347 aa11.71□□□□□ -0.54
AP003559.1-201ENST00000540906 NDUFS1P28331 727 aa11.71□□□□□ -0.54
AP003559.1-201ENST00000540906 ASMTP46597 345 aa11.71□□□□□ -0.54
AP003559.1-201ENST00000540906 PLA2G16P53816 162 aa11.71□□□□□ -0.54
AP003559.1-201ENST00000540906 PHEXP78562 749 aa11.71□□□□□ -0.54
AP003559.1-201ENST00000540906 PLCL1Q15111 1095 aa11.71□□□□□ -0.54
AP003559.1-201ENST00000540906 TJAP1Q5JTD0 557 aa11.71□□□□□ -0.54
AP003559.1-201ENST00000540906 MSANTD1Q6ZTZ1 278 aa11.71□□□□□ -0.54
AP003559.1-201ENST00000540906 LPCAT2Q7L5N7 544 aa11.71□□□□□ -0.54
AP003559.1-201ENST00000540906 GPR155Q7Z3F1 870 aa11.71□□□□□ -0.54
AP003559.1-201ENST00000540906 ARPINQ7Z6K5 226 aa11.71□□□□□ -0.54
AP003559.1-201ENST00000540906 TM4SF18Q96CE8 201 aa11.71□□□□□ -0.54
AP003559.1-201ENST00000540906 TMEM121BQ9BXQ6 578 aaPredicted RBP11.71□□□□□ -0.54
AP003559.1-201ENST00000540906 GSDMCQ9BYG8 508 aa11.71□□□□□ -0.54
AP003559.1-201ENST00000540906 KAT8Q9H7Z6 458 aaKnown RBP11.71□□□□□ -0.54
AP003559.1-201ENST00000540906 RMND5AQ9H871 391 aa11.71□□□□□ -0.54
AP003559.1-201ENST00000540906 TM9SF3Q9HD45 589 aa11.71□□□□□ -0.54
AP003559.1-201ENST00000540906 SH3BP4Q9P0V3 963 aa11.71□□□□□ -0.54
AP003559.1-201ENST00000540906 C5AR2Q9P296 337 aa11.71□□□□□ -0.54
AP003559.1-201ENST00000540906 LRRC42Q9Y546 428 aa11.71□□□□□ -0.54
AP003559.1-201ENST00000540906 PCDHB3Q9Y5E6 796 aa11.71□□□□□ -0.54
AP003559.1-201ENST00000540906 SNX11Q9Y5W9 270 aa11.71□□□□□ -0.54
AP003559.1-201ENST00000540906 TP53BP1Q12888 1972 aaPredicted RBP11.7□□□□□ -0.54
AP003559.1-201ENST00000540906 LRIT2A6NDA9 550 aa11.7□□□□□ -0.54
AP003559.1-201ENST00000540906 B4DGG1 531 aa11.7□□□□□ -0.54
AP003559.1-201ENST00000540906 SH3BP5O60239 455 aa11.7□□□□□ -0.54
AP003559.1-201ENST00000540906 PRKRAO75569 313 aaKnown RBP11.7□□□□□ -0.54
AP003559.1-201ENST00000540906 TIPRLO75663 272 aa11.7□□□□□ -0.54
AP003559.1-201ENST00000540906 SEMA3DO95025 777 aa11.7□□□□□ -0.54
AP003559.1-201ENST00000540906 PVRP15151 417 aa11.7□□□□□ -0.54
AP003559.1-201ENST00000540906 GGT1P19440 569 aa11.7□□□□□ -0.54
AP003559.1-201ENST00000540906 MAGP20916 626 aa11.7□□□□□ -0.54
AP003559.1-201ENST00000540906 CD38P28907 300 aa11.7□□□□□ -0.54
AP003559.1-201ENST00000540906 CMPK1P30085 196 aa11.7□□□□□ -0.54
AP003559.1-201ENST00000540906 SLC7A1P30825 629 aa11.7□□□□□ -0.54
AP003559.1-201ENST00000540906 HPCAL1P37235 193 aa11.7□□□□□ -0.54
AP003559.1-201ENST00000540906 MAZP56270 477 aaKnown RBP11.7□□□□□ -0.54
AP003559.1-201ENST00000540906 ABATP80404 500 aa11.7□□□□□ -0.54
AP003559.1-201ENST00000540906 C16orf72Q14CZ0 275 aa11.7□□□□□ -0.54
AP003559.1-201ENST00000540906 TRIP10Q15642 601 aa11.7□□□□□ -0.54
AP003559.1-201ENST00000540906 DPY19L1Q2PZI1 675 aa11.7□□□□□ -0.54
AP003559.1-201ENST00000540906 SPATS1Q496A3 300 aa11.7□□□□□ -0.54
AP003559.1-201ENST00000540906 CCNYL2Q5T2Q4 361 aa11.7□□□□□ -0.54
AP003559.1-201ENST00000540906 FCRL6Q6DN72 434 aa11.7□□□□□ -0.54
AP003559.1-201ENST00000540906 GLYATQ6IB77 296 aa11.7□□□□□ -0.54
AP003559.1-201ENST00000540906 ZFP1Q6P2D0 407 aa11.7□□□□□ -0.54
AP003559.1-201ENST00000540906 ZNF438Q7Z4V0 828 aa11.7□□□□□ -0.54
AP003559.1-201ENST00000540906 VN1R4Q7Z5H5 301 aa11.7□□□□□ -0.54
AP003559.1-201ENST00000540906 AMIGO2Q86SJ2 522 aa11.7□□□□□ -0.54
AP003559.1-201ENST00000540906 TRIM48Q8IWZ4 208 aa11.7□□□□□ -0.54
AP003559.1-201ENST00000540906 SHISA5Q8N114 240 aa11.7□□□□□ -0.54
AP003559.1-201ENST00000540906 TMEM132CQ8N3T6 1108 aa11.7□□□□□ -0.54
AP003559.1-201ENST00000540906 FAM86B1Q8N7N1 296 aa11.7□□□□□ -0.54
AP003559.1-201ENST00000540906 MFSD2AQ8NA29 543 aa11.7□□□□□ -0.54
AP003559.1-201ENST00000540906 PNPT1Q8TCS8 783 aaKnown RBP11.7□□□□□ -0.54
AP003559.1-201ENST00000540906 LRGUKQ96M69 825 aa11.7□□□□□ -0.54
AP003559.1-201ENST00000540906 CCDC115Q96NT0 180 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms