RNA–Protein interactions for RNA: ENST00000540865.5

SNHG1-214, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 784 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-214ENST00000540865 ZNF670Q9BS34 389 aa4.34□□□□□ -1.71
SNHG1-214ENST00000540865 SYT11Q9BT88 431 aa4.34□□□□□ -1.71
SNHG1-214ENST00000540865 SARGQ9BW04 601 aa4.34□□□□□ -1.71
SNHG1-214ENST00000540865 HES7Q9BYE0 225 aa4.34□□□□□ -1.71
SNHG1-214ENST00000540865 TP63Q9H3D4 680 aaPredicted RBP4.34□□□□□ -1.71
SNHG1-214ENST00000540865 VPS37BQ9H9H4 285 aa4.34□□□□□ -1.71
SNHG1-214ENST00000540865 GLOD4Q9HC38 313 aa4.34□□□□□ -1.71
SNHG1-214ENST00000540865 SMURF1Q9HCE7 757 aa4.34□□□□□ -1.71
SNHG1-214ENST00000540865 INTS7Q9NVH2 962 aaKnown RBP4.34□□□□□ -1.71
SNHG1-214ENST00000540865 TAB2Q9NYJ8 693 aa4.34□□□□□ -1.71
SNHG1-214ENST00000540865 SAMD15Q9P1V8 674 aa4.34□□□□□ -1.71
SNHG1-214ENST00000540865 ASH2LQ9UBL3 628 aa4.34□□□□□ -1.71
SNHG1-214ENST00000540865 GNPTGQ9UJJ9 305 aa4.34□□□□□ -1.71
SNHG1-214ENST00000540865 ADAM21Q9UKJ8 722 aa4.34□□□□□ -1.71
SNHG1-214ENST00000540865 CDC14AQ9UNH5 594 aa4.34□□□□□ -1.71
SNHG1-214ENST00000540865 MAU2Q9Y6X3 613 aa4.34□□□□□ -1.71
SNHG1-214ENST00000540865 ANKRD12Q6UB98 2062 aa4.34□□□□□ -1.71
SNHG1-214ENST00000540865 GTF3C1Q12789 2109 aa4.33□□□□□ -1.72
SNHG1-214ENST00000540865 A0A1B0GTH9 108 aa4.33□□□□□ -1.72
SNHG1-214ENST00000540865 HYKKA2RU49 373 aa4.33□□□□□ -1.72
SNHG1-214ENST00000540865 A6NNC1 897 aa4.33□□□□□ -1.72
SNHG1-214ENST00000540865 RNF212BA8MTL3 300 aa4.33□□□□□ -1.72
SNHG1-214ENST00000540865 TARM1B6A8C7 271 aa4.33□□□□□ -1.72
SNHG1-214ENST00000540865 INAFM1C9JVW0 142 aa4.33□□□□□ -1.72
SNHG1-214ENST00000540865 ZNF561-AS1K7EIQ3 104 aa4.33□□□□□ -1.72
SNHG1-214ENST00000540865 STX7O15400 261 aaKnown RBP4.33□□□□□ -1.72
SNHG1-214ENST00000540865 ARHGEF9O43307 516 aa4.33□□□□□ -1.72
SNHG1-214ENST00000540865 BUD23O43709 281 aaKnown RBP4.33□□□□□ -1.72
SNHG1-214ENST00000540865 NEURL1O76050 574 aa4.33□□□□□ -1.72
SNHG1-214ENST00000540865 SRP72O76094 671 aaKnown RBP4.33□□□□□ -1.72
SNHG1-214ENST00000540865 FKBP9O95302 570 aa4.33□□□□□ -1.72
SNHG1-214ENST00000540865 AP2A1O95782 977 aa4.33□□□□□ -1.72
SNHG1-214ENST00000540865 TSPAN15O95858 294 aa4.33□□□□□ -1.72
SNHG1-214ENST00000540865 TPM2P07951 284 aa4.33□□□□□ -1.72
SNHG1-214ENST00000540865 TPBGLP0DKB5 382 aa4.33□□□□□ -1.72
SNHG1-214ENST00000540865 MED14OSP0DP75 135 aa4.33□□□□□ -1.72
SNHG1-214ENST00000540865 NAT1P18440 290 aa4.33□□□□□ -1.72
SNHG1-214ENST00000540865 PI3P19957 117 aa4.33□□□□□ -1.72
SNHG1-214ENST00000540865 ACADLP28330 430 aa4.33□□□□□ -1.72
SNHG1-214ENST00000540865 PEBP1P30086 187 aaKnown RBP4.33□□□□□ -1.72
SNHG1-214ENST00000540865 PTGER1P34995 402 aa4.33□□□□□ -1.72
SNHG1-214ENST00000540865 TNNT3P45378 269 aaPredicted RBP4.33□□□□□ -1.72
SNHG1-214ENST00000540865 GYS2P54840 703 aa4.33□□□□□ -1.72
SNHG1-214ENST00000540865 WNT3AP56704 352 aa4.33□□□□□ -1.72
SNHG1-214ENST00000540865 NKX6-1P78426 367 aaPredicted RBP4.33□□□□□ -1.72
SNHG1-214ENST00000540865 PMPCAQ10713 525 aa4.33□□□□□ -1.72
SNHG1-214ENST00000540865 DAZAP2Q15038 168 aaPredicted RBP4.33□□□□□ -1.72
SNHG1-214ENST00000540865 PDK2Q15119 407 aa4.33□□□□□ -1.72
SNHG1-214ENST00000540865 NOMO1Q15155 1222 aa4.33□□□□□ -1.72
SNHG1-214ENST00000540865 TAZQ16635 292 aa4.33□□□□□ -1.72
SNHG1-214ENST00000540865 MEP1AQ16819 746 aa4.33□□□□□ -1.72
SNHG1-214ENST00000540865 HADHQ16836 314 aaKnown RBP4.33□□□□□ -1.72
SNHG1-214ENST00000540865 MUM1Q2TAK8 710 aa4.33□□□□□ -1.72
SNHG1-214ENST00000540865 SLC25A35Q3KQZ1 300 aa4.33□□□□□ -1.72
SNHG1-214ENST00000540865 SIRPB2Q5JXA9 342 aa4.33□□□□□ -1.72
SNHG1-214ENST00000540865 WASHC2DQ5SRD0 308 aa4.33□□□□□ -1.72
SNHG1-214ENST00000540865 PLAG1Q6DJT9 500 aa4.33□□□□□ -1.72
SNHG1-214ENST00000540865 SPINK14Q6IE38 97 aa4.33□□□□□ -1.72
SNHG1-214ENST00000540865 ARHGAP11AQ6P4F7 1023 aa4.33□□□□□ -1.72
SNHG1-214ENST00000540865 FIGLAQ6QHK4 219 aa4.33□□□□□ -1.72
SNHG1-214ENST00000540865 CD300LDQ6UXZ3 194 aa4.33□□□□□ -1.72
SNHG1-214ENST00000540865 ETV3LQ6ZN32 361 aa4.33□□□□□ -1.72
SNHG1-214ENST00000540865 ARHGEF18Q6ZSZ5 1173 aa4.33□□□□□ -1.72
SNHG1-214ENST00000540865 GALNTL5Q7Z4T8 443 aa4.33□□□□□ -1.72
SNHG1-214ENST00000540865 IRF2BP2Q7Z5L9 587 aa4.33□□□□□ -1.72
SNHG1-214ENST00000540865 LGI4Q8N135 537 aa4.33□□□□□ -1.72
SNHG1-214ENST00000540865 PQLC3Q8N755 202 aa4.33□□□□□ -1.72
SNHG1-214ENST00000540865 KCTD6Q8NC69 237 aa4.33□□□□□ -1.72
SNHG1-214ENST00000540865 BHLHE22Q8NFJ8 381 aaPredicted RBP4.33□□□□□ -1.72
SNHG1-214ENST00000540865 OR5K2Q8NHB8 316 aa4.33□□□□□ -1.72
SNHG1-214ENST00000540865 BLOC1S5Q8TDH9 187 aa4.33□□□□□ -1.72
SNHG1-214ENST00000540865 FAM222BQ8WU58 562 aa4.33□□□□□ -1.72
SNHG1-214ENST00000540865 ZUFSPQ96AP4 578 aa4.33□□□□□ -1.72
SNHG1-214ENST00000540865 ULK4Q96C45 1275 aa4.33□□□□□ -1.72
SNHG1-214ENST00000540865 FAF2Q96CS3 445 aa4.33□□□□□ -1.72
SNHG1-214ENST00000540865 MVB12AQ96EY5 273 aa4.33□□□□□ -1.72
SNHG1-214ENST00000540865 ASB8Q9H765 288 aa4.33□□□□□ -1.72
SNHG1-214ENST00000540865 BEX4Q9NWD9 120 aaPredicted RBP4.33□□□□□ -1.72
SNHG1-214ENST00000540865 CAMSAP3Q9P1Y5 1249 aaPredicted RBP4.33□□□□□ -1.72
SNHG1-214ENST00000540865 IP6K2Q9UHH9 426 aa4.33□□□□□ -1.72
SNHG1-214ENST00000540865 FAM153AQ9UHL3 310 aa4.33□□□□□ -1.72
SNHG1-214ENST00000540865 CRLS1Q9UJA2 301 aa4.33□□□□□ -1.72
SNHG1-214ENST00000540865 ASF1AQ9Y294 204 aa4.33□□□□□ -1.72
SNHG1-214ENST00000540865 KLHL20Q9Y2M5 609 aa4.33□□□□□ -1.72
SNHG1-214ENST00000540865 KLK4Q9Y5K2 254 aa4.33□□□□□ -1.72
SNHG1-214ENST00000540865 ALG6Q9Y672 507 aa4.33□□□□□ -1.72
SNHG1-214ENST00000540865 FAM169AQ9Y6X4 670 aa4.33□□□□□ -1.72
SNHG1-214ENST00000540865 SONP18583 2426 aaKnown RBP4.32□□□□□ -1.72
SNHG1-214ENST00000540865 IGLV3-16A0A075B6K0 115 aa4.32□□□□□ -1.72
SNHG1-214ENST00000540865 A0A0A6YYK5 440 aaPredicted RBP4.32□□□□□ -1.72
SNHG1-214ENST00000540865 C2orf81A6NN90 581 aa4.32□□□□□ -1.72
SNHG1-214ENST00000540865 GABRR3A8MPY1 467 aa4.32□□□□□ -1.72
SNHG1-214ENST00000540865 NPIPB6E9PJ23 425 aa4.32□□□□□ -1.72
SNHG1-214ENST00000540865 LIN7AO14910 233 aaPredicted RBP4.32□□□□□ -1.72
SNHG1-214ENST00000540865 TFECO14948 347 aaPredicted RBP4.32□□□□□ -1.72
SNHG1-214ENST00000540865 NME2P1O60361 137 aa4.32□□□□□ -1.72
SNHG1-214ENST00000540865 SLC25A12O75746 678 aa4.32□□□□□ -1.72
SNHG1-214ENST00000540865 GOSR1O95249 250 aa4.32□□□□□ -1.72
SNHG1-214ENST00000540865 CYC1P08574 325 aa4.32□□□□□ -1.72
SNHG1-214ENST00000540865 C8orf89P0DMQ9 161 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms