RNA–Protein interactions for RNA: ENST00000540756.5

TTC3-225, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 2 BASIC

Gene TTC3, Length 2,025 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-225ENST00000540756 A0A1B0GVT2 93 aa23.43■■□□□ 1.34
TTC3-225ENST00000540756 LRIT2A6NDA9 550 aa23.43■■□□□ 1.34
TTC3-225ENST00000540756 NDUFS4O43181 175 aa23.43■■□□□ 1.34
TTC3-225ENST00000540756 NPPAP01160 153 aa23.43■■□□□ 1.34
TTC3-225ENST00000540756 PTPN6P29350 595 aa23.43■■□□□ 1.34
TTC3-225ENST00000540756 ASMTP46597 345 aa23.43■■□□□ 1.34
TTC3-225ENST00000540756 AFF3P51826 1226 aaKnown RBP23.43■■□□□ 1.34
TTC3-225ENST00000540756 C21orf58P58505 322 aa23.43■■□□□ 1.34
TTC3-225ENST00000540756 LIPEQ05469 1076 aa23.43■■□□□ 1.34
TTC3-225ENST00000540756 CLECL1Q8IZS7 167 aa23.43■■□□□ 1.34
TTC3-225ENST00000540756 RSC1A1Q92681 617 aa23.43■■□□□ 1.34
TTC3-225ENST00000540756 SLC22A18Q96BI1 424 aa23.43■■□□□ 1.34
TTC3-225ENST00000540756 PRMT8Q9NR22 394 aaPredicted RBP23.43■■□□□ 1.34
TTC3-225ENST00000540756 MCM8Q9UJA3 840 aa23.43■■□□□ 1.34
TTC3-225ENST00000540756 DOLKQ9UPQ8 538 aa23.43■■□□□ 1.34
TTC3-225ENST00000540756 PCDHGA4Q9Y5G9 962 aa23.43■■□□□ 1.34
TTC3-225ENST00000540756 SCN3AQ9NY46 2000 aa23.43■■□□□ 1.34
TTC3-225ENST00000540756 AQP9O43315 295 aa23.43■■□□□ 1.34
TTC3-225ENST00000540756 PRMT3O60678 531 aa23.43■■□□□ 1.34
TTC3-225ENST00000540756 CLEC3AO75596 197 aa23.43■■□□□ 1.34
TTC3-225ENST00000540756 HOXA6P31267 233 aa23.43■■□□□ 1.34
TTC3-225ENST00000540756 SESN3P58005 492 aa23.43■■□□□ 1.34
TTC3-225ENST00000540756 SNRPNP63162 240 aaKnown RBP23.43■■□□□ 1.34
TTC3-225ENST00000540756 ZIC1Q15915 447 aa23.43■■□□□ 1.34
TTC3-225ENST00000540756 MUM1Q2TAK8 710 aa23.43■■□□□ 1.34
TTC3-225ENST00000540756 FBXO42Q6P3S6 717 aa23.43■■□□□ 1.34
TTC3-225ENST00000540756 CYP2R1Q6VVX0 501 aa23.43■■□□□ 1.34
TTC3-225ENST00000540756 ARL14Q8N4G2 192 aa23.43■■□□□ 1.34
TTC3-225ENST00000540756 CACNA1EQ15878 2313 aa23.43■■□□□ 1.34
TTC3-225ENST00000540756 ZW10O43264 779 aa23.42■■□□□ 1.34
TTC3-225ENST00000540756 CTSVO60911 334 aa23.42■■□□□ 1.34
TTC3-225ENST00000540756 DHPSP49366 369 aaPredicted RBP23.42■■□□□ 1.34
TTC3-225ENST00000540756 GSK3BP49841 420 aa23.42■■□□□ 1.34
TTC3-225ENST00000540756 C21orf59P57076 290 aa23.42■■□□□ 1.34
TTC3-225ENST00000540756 C2orf80Q0P641 193 aa23.42■■□□□ 1.34
TTC3-225ENST00000540756 WDR45BQ5MNZ6 344 aa23.42■■□□□ 1.34
TTC3-225ENST00000540756 CCNYL2Q5T2Q4 361 aa23.42■■□□□ 1.34
TTC3-225ENST00000540756 FCRL6Q6DN72 434 aa23.42■■□□□ 1.34
TTC3-225ENST00000540756 FAM180BQ6P0A1 224 aa23.42■■□□□ 1.34
TTC3-225ENST00000540756 RNF111Q6ZNA4 994 aa23.42■■□□□ 1.34
TTC3-225ENST00000540756 GKN2Q86XP6 184 aa23.42■■□□□ 1.34
TTC3-225ENST00000540756 TMEM132CQ8N3T6 1108 aa23.42■■□□□ 1.34
TTC3-225ENST00000540756 ANKRD27Q96NW4 1050 aa23.42■■□□□ 1.34
TTC3-225ENST00000540756 TEFMQ96QE5 360 aaKnown RBP23.42■■□□□ 1.34
TTC3-225ENST00000540756 C17orf62Q9BQA9 187 aa23.42■■□□□ 1.34
TTC3-225ENST00000540756 ALG2Q9H553 416 aa23.42■■□□□ 1.34
TTC3-225ENST00000540756 S100A14Q9HCY8 104 aa23.42■■□□□ 1.34
TTC3-225ENST00000540756 SH3BP4Q9P0V3 963 aa23.42■■□□□ 1.34
TTC3-225ENST00000540756 SPASTQ9UBP0 616 aa23.42■■□□□ 1.34
TTC3-225ENST00000540756 NIPSNAP3AQ9UFN0 247 aaPredicted RBP23.42■■□□□ 1.34
TTC3-225ENST00000540756 AP1M2Q9Y6Q5 423 aa23.42■■□□□ 1.34
TTC3-225ENST00000540756 TRBV5-3A0A0A0MS03 114 aa23.42■■□□□ 1.34
TTC3-225ENST00000540756 NOBOXO60393 691 aa23.42■■□□□ 1.34
TTC3-225ENST00000540756 SEMA3DO95025 777 aa23.42■■□□□ 1.34
TTC3-225ENST00000540756 IL3P08700 152 aa23.42■■□□□ 1.34
TTC3-225ENST00000540756 SERPINB1P30740 379 aa23.42■■□□□ 1.34
TTC3-225ENST00000540756 MRPS22P82650 360 aaKnown RBP23.42■■□□□ 1.34
TTC3-225ENST00000540756 CSTF1Q05048 431 aaKnown RBP23.42■■□□□ 1.34
TTC3-225ENST00000540756 SRSF11Q05519 484 aaKnown RBP23.42■■□□□ 1.34
TTC3-225ENST00000540756 CPTPQ5TA50 214 aa23.42■■□□□ 1.34
TTC3-225ENST00000540756 FAM71E1Q6IPT2 247 aa23.42■■□□□ 1.34
TTC3-225ENST00000540756 MFSD9Q8NBP5 474 aa23.42■■□□□ 1.34
TTC3-225ENST00000540756 OR8J2Q8NGG1 315 aa23.42■■□□□ 1.34
TTC3-225ENST00000540756 DUSP26Q9BV47 211 aa23.42■■□□□ 1.34
TTC3-225ENST00000540756 SARGQ9BW04 601 aa23.42■■□□□ 1.34
TTC3-225ENST00000540756 KCNH6Q9H252 994 aa23.42■■□□□ 1.34
TTC3-225ENST00000540756 MAN2B2Q9Y2E5 1009 aa23.42■■□□□ 1.34
TTC3-225ENST00000540756 TMPRSS11DO60235 418 aa23.41■■□□□ 1.34
TTC3-225ENST00000540756 HSD17B1P14061 328 aa23.41■■□□□ 1.34
TTC3-225ENST00000540756 HOXB9P17482 250 aaPredicted RBP23.41■■□□□ 1.34
TTC3-225ENST00000540756 HNRNPKP61978 463 aaKnown RBP eCLIP23.41■■□□□ 1.34
TTC3-225ENST00000540756 TJAP1Q5JTD0 557 aa23.41■■□□□ 1.34
TTC3-225ENST00000540756 SPESP1Q6UW49 350 aa23.41■■□□□ 1.34
TTC3-225ENST00000540756 ZNF793Q6ZN11 406 aa23.41■■□□□ 1.34
TTC3-225ENST00000540756 VN1R4Q7Z5H5 301 aa23.41■■□□□ 1.34
TTC3-225ENST00000540756 C10orf111Q8N326 155 aa23.41■■□□□ 1.34
TTC3-225ENST00000540756 ITCHQ96J02 903 aa23.41■■□□□ 1.34
TTC3-225ENST00000540756 ABCG4Q9H172 646 aa23.41■■□□□ 1.34
TTC3-225ENST00000540756 REEP4Q9H6H4 257 aa23.41■■□□□ 1.34
TTC3-225ENST00000540756 MYNNQ9NPC7 610 aa23.41■■□□□ 1.34
TTC3-225ENST00000540756 AHSPQ9NZD4 102 aa23.41■■□□□ 1.34
TTC3-225ENST00000540756 PCDH15Q96QU1 1955 aa23.4■■□□□ 1.34
TTC3-225ENST00000540756 OR2A25A4D2G3 310 aa23.4■■□□□ 1.34
TTC3-225ENST00000540756 LAMTOR5O43504 91 aa23.4■■□□□ 1.34
TTC3-225ENST00000540756 LMNAP02545 664 aaKnown RBP23.4■■□□□ 1.34
TTC3-225ENST00000540756 FURINP09958 794 aa23.4■■□□□ 1.34
TTC3-225ENST00000540756 TTLQ8NG68 377 aa23.4■■□□□ 1.34
TTC3-225ENST00000540756 RGMAQ96B86 450 aa23.4■■□□□ 1.34
TTC3-225ENST00000540756 MS4A6EQ96DS6 147 aa23.4■■□□□ 1.34
TTC3-225ENST00000540756 RMND5AQ9H871 391 aa23.4■■□□□ 1.34
TTC3-225ENST00000540756 CCDC163A0A0D9SF12 145 aa23.4■■□□□ 1.34
TTC3-225ENST00000540756 C2orf74A8MZ97 194 aa23.4■■□□□ 1.34
TTC3-225ENST00000540756 H3BNX3 289 aa23.4■■□□□ 1.34
TTC3-225ENST00000540756 RFXANKO14593 260 aa23.4■■□□□ 1.34
TTC3-225ENST00000540756 SH3BP5O60239 455 aa23.4■■□□□ 1.34
TTC3-225ENST00000540756 PIAS2O75928 621 aa23.4■■□□□ 1.34
TTC3-225ENST00000540756 HRH2P25021 359 aa23.4■■□□□ 1.34
TTC3-225ENST00000540756 AHRP35869 848 aa23.4■■□□□ 1.34
TTC3-225ENST00000540756 HPCAL1P37235 193 aa23.4■■□□□ 1.34
TTC3-225ENST00000540756 BNC1Q01954 994 aa23.4■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms