RNA–Protein interactions for RNA: ENST00000540608.5

NPC1-202, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 2,790 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-202ENST00000540608 ETV6P41212 452 aa11.82□□□□□ -0.52
NPC1-202ENST00000540608 HNF4AP41235 474 aa11.82□□□□□ -0.52
NPC1-202ENST00000540608 UGT2B15P54855 530 aa11.82□□□□□ -0.52
NPC1-202ENST00000540608 CCL23P55773 120 aa11.82□□□□□ -0.52
NPC1-202ENST00000540608 ELOAQ14241 798 aaKnown RBP11.82□□□□□ -0.52
NPC1-202ENST00000540608 IFI44LQ53G44 452 aa11.82□□□□□ -0.52
NPC1-202ENST00000540608 SOWAHCQ53LP3 525 aaPredicted RBP11.82□□□□□ -0.52
NPC1-202ENST00000540608 DESI1Q6ICB0 168 aa11.82□□□□□ -0.52
NPC1-202ENST00000540608 SYTL1Q8IYJ3 562 aa11.82□□□□□ -0.52
NPC1-202ENST00000540608 C1orf52Q8N6N3 182 aaKnown RBP11.82□□□□□ -0.52
NPC1-202ENST00000540608 OR4A15Q8NGL6 344 aa11.82□□□□□ -0.52
NPC1-202ENST00000540608 OR52J3Q8NH60 311 aa11.82□□□□□ -0.52
NPC1-202ENST00000540608 CHTF18Q8WVB6 975 aa11.82□□□□□ -0.52
NPC1-202ENST00000540608 NIPSNAP1Q9BPW8 284 aa11.82□□□□□ -0.52
NPC1-202ENST00000540608 CENPOQ9BU64 300 aa11.82□□□□□ -0.52
NPC1-202ENST00000540608 HOXD1Q9GZZ0 328 aa11.82□□□□□ -0.52
NPC1-202ENST00000540608 SGK2Q9HBY8 427 aa11.82□□□□□ -0.52
NPC1-202ENST00000540608 ZNF334Q9HCZ1 680 aaPredicted RBP11.82□□□□□ -0.52
NPC1-202ENST00000540608 RAPGEFL1Q9UHV5 662 aa11.82□□□□□ -0.52
NPC1-202ENST00000540608 IFT52Q9Y366 437 aa11.82□□□□□ -0.52
NPC1-202ENST00000540608 SRCP12931 536 aa11.82□□□□□ -0.52
NPC1-202ENST00000540608 TNFRSF1BP20333 461 aa11.82□□□□□ -0.52
NPC1-202ENST00000540608 SPIBQ01892 262 aa11.82□□□□□ -0.52
NPC1-202ENST00000540608 PCDH1Q08174 1060 aa11.82□□□□□ -0.52
NPC1-202ENST00000540608 CARTPTQ16568 116 aa11.82□□□□□ -0.52
NPC1-202ENST00000540608 LRIT3Q3SXY7 679 aa11.82□□□□□ -0.52
NPC1-202ENST00000540608 HEATR4Q86WZ0 1026 aa11.82□□□□□ -0.52
NPC1-202ENST00000540608 LGI4Q8N135 537 aa11.82□□□□□ -0.52
NPC1-202ENST00000540608 FIBINQ8TAL6 211 aa11.82□□□□□ -0.52
NPC1-202ENST00000540608 ASZ1Q8WWH4 475 aa11.82□□□□□ -0.52
NPC1-202ENST00000540608 ELMO1Q92556 727 aa11.82□□□□□ -0.52
NPC1-202ENST00000540608 HMX1Q9NP08 348 aaPredicted RBP11.82□□□□□ -0.52
NPC1-202ENST00000540608 THSD1Q9NS62 852 aa11.82□□□□□ -0.52
NPC1-202ENST00000540608 GPATCH2Q9NW75 528 aa11.82□□□□□ -0.52
NPC1-202ENST00000540608 MKLN1Q9UL63 735 aa11.82□□□□□ -0.52
NPC1-202ENST00000540608 PCDHGB6Q9Y5F9 930 aa11.82□□□□□ -0.52
NPC1-202ENST00000540608 MGAT4DA6NG13 374 aa11.81□□□□□ -0.52
NPC1-202ENST00000540608 PRRG1O14668 218 aa11.81□□□□□ -0.52
NPC1-202ENST00000540608 DYRK3O43781 588 aa11.81□□□□□ -0.52
NPC1-202ENST00000540608 TNFRSF21O75509 655 aa11.81□□□□□ -0.52
NPC1-202ENST00000540608 SLCO2B1O94956 709 aa11.81□□□□□ -0.52
NPC1-202ENST00000540608 OLFM2O95897 454 aa11.81□□□□□ -0.52
NPC1-202ENST00000540608 ITGA2P17301 1181 aa11.81□□□□□ -0.52
NPC1-202ENST00000540608 ALOX12P18054 663 aa11.81□□□□□ -0.52
NPC1-202ENST00000540608 CRATP43155 626 aa11.81□□□□□ -0.52
NPC1-202ENST00000540608 MVDP53602 400 aa11.81□□□□□ -0.52
NPC1-202ENST00000540608 CRISP3P54108 245 aa11.81□□□□□ -0.52
NPC1-202ENST00000540608 CDH12P55289 794 aa11.81□□□□□ -0.52
NPC1-202ENST00000540608 NOGQ13253 232 aa11.81□□□□□ -0.52
NPC1-202ENST00000540608 EXOC3L2Q2M3D2 409 aa11.81□□□□□ -0.52
NPC1-202ENST00000540608 MPP7Q5T2T1 576 aa11.81□□□□□ -0.52
NPC1-202ENST00000540608 GDPD3Q7L5L3 318 aa11.81□□□□□ -0.52
NPC1-202ENST00000540608 ZNF367Q7RTV3 350 aa11.81□□□□□ -0.52
NPC1-202ENST00000540608 GOT1L1Q8NHS2 421 aaPredicted RBP11.81□□□□□ -0.52
NPC1-202ENST00000540608 C9orf43Q8TAL5 461 aaPredicted RBP11.81□□□□□ -0.52
NPC1-202ENST00000540608 UTP15Q8TED0 518 aaKnown RBP11.81□□□□□ -0.52
NPC1-202ENST00000540608 YME1L1Q96TA2 773 aa11.81□□□□□ -0.52
NPC1-202ENST00000540608 CHCHD6Q9BRQ6 235 aa11.81□□□□□ -0.52
NPC1-202ENST00000540608 CCM2Q9BSQ5 444 aa11.81□□□□□ -0.52
NPC1-202ENST00000540608 BRD9Q9H8M2 597 aa11.81□□□□□ -0.52
NPC1-202ENST00000540608 MS4A12Q9NXJ0 267 aa11.81□□□□□ -0.52
NPC1-202ENST00000540608 SH3BP4Q9P0V3 963 aa11.81□□□□□ -0.52
NPC1-202ENST00000540608 CD84Q9UIB8 345 aa11.81□□□□□ -0.52
NPC1-202ENST00000540608 ZNF232Q9UNY5 417 aa11.81□□□□□ -0.52
NPC1-202ENST00000540608 RBMX2Q9Y388 322 aaKnown RBP11.81□□□□□ -0.52
NPC1-202ENST00000540608 PNMA8CA0A1B0GUJ8 204 aa11.81□□□□□ -0.52
NPC1-202ENST00000540608 OPN1SWP03999 348 aa11.81□□□□□ -0.52
NPC1-202ENST00000540608 GSTM1P09488 218 aa11.81□□□□□ -0.52
NPC1-202ENST00000540608 CTSOP43234 321 aaPredicted RBP11.81□□□□□ -0.52
NPC1-202ENST00000540608 OR1E2P47887 323 aa11.81□□□□□ -0.52
NPC1-202ENST00000540608 STK19P49842 368 aaPredicted RBP11.81□□□□□ -0.52
NPC1-202ENST00000540608 MPPE1Q53F39 396 aa11.81□□□□□ -0.52
NPC1-202ENST00000540608 SPIN4Q56A73 249 aa11.81□□□□□ -0.52
NPC1-202ENST00000540608 COX20Q5RI15 118 aa11.81□□□□□ -0.52
NPC1-202ENST00000540608 C19orf48Q6RUI8 117 aa11.81□□□□□ -0.52
NPC1-202ENST00000540608 CCBE1Q6UXH8 406 aaPredicted RBP11.81□□□□□ -0.52
NPC1-202ENST00000540608 DEFB128Q7Z7B8 93 aa11.81□□□□□ -0.52
NPC1-202ENST00000540608 NLRP8Q86W28 1048 aa11.81□□□□□ -0.52
NPC1-202ENST00000540608 B3GNT7Q8NFL0 401 aa11.81□□□□□ -0.52
NPC1-202ENST00000540608 ATL1Q8WXF7 558 aa11.81□□□□□ -0.52
NPC1-202ENST00000540608 AUTS2Q8WXX7 1259 aa11.81□□□□□ -0.52
NPC1-202ENST00000540608 Q96MT0 163 aa11.81□□□□□ -0.52
NPC1-202ENST00000540608 CDCA4Q9BXL8 241 aa11.81□□□□□ -0.52
NPC1-202ENST00000540608 CPEB1Q9BZB8 566 aaKnown RBP11.81□□□□□ -0.52
NPC1-202ENST00000540608 BHLHE41Q9C0J9 482 aaPredicted RBP11.81□□□□□ -0.52
NPC1-202ENST00000540608 EHD1Q9H4M9 534 aa11.81□□□□□ -0.52
NPC1-202ENST00000540608 ZNF556Q9HAH1 456 aa11.81□□□□□ -0.52
NPC1-202ENST00000540608 MOV10Q9HCE1 1003 aaKnown RBP11.81□□□□□ -0.52
NPC1-202ENST00000540608 IMPAD1Q9NX62 359 aa11.81□□□□□ -0.52
NPC1-202ENST00000540608 KLHL3Q9UH77 587 aa11.81□□□□□ -0.52
NPC1-202ENST00000540608 LSM7Q9UK45 103 aaKnown RBP11.81□□□□□ -0.52
NPC1-202ENST00000540608 DUSP12Q9UNI6 340 aa11.81□□□□□ -0.52
NPC1-202ENST00000540608 MKI67P46013 3256 aaKnown RBP11.8□□□□□ -0.52
NPC1-202ENST00000540608 PRAMEF25A6NGN4 478 aa11.8□□□□□ -0.52
NPC1-202ENST00000540608 ARHGEF33A8MVX0 844 aa11.8□□□□□ -0.52
NPC1-202ENST00000540608 PITPNM1O00562 1244 aa11.8□□□□□ -0.52
NPC1-202ENST00000540608 SGTAO43765 313 aa11.8□□□□□ -0.52
NPC1-202ENST00000540608 BNIP3LO60238 219 aa11.8□□□□□ -0.52
NPC1-202ENST00000540608 PQBP1O60828 265 aaKnown RBP11.8□□□□□ -0.52
NPC1-202ENST00000540608 MTX2O75431 263 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms