RNA–Protein interactions for RNA: ENST00000540486.5

TRAPPC1-202, Transcript of trafficking protein particle complex 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TRAPPC1, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-202ENST00000540486 ZNF460Q14592 562 aa8.4□□□□□ -1.06
TRAPPC1-202ENST00000540486 EFTUD2Q15029 972 aaKnown RBP eCLIP8.4□□□□□ -1.06
TRAPPC1-202ENST00000540486 ZIC1Q15915 447 aa8.4□□□□□ -1.06
TRAPPC1-202ENST00000540486 TTLL9Q3SXZ7 439 aa8.4□□□□□ -1.06
TRAPPC1-202ENST00000540486 FAM153CQ494X1 144 aa8.4□□□□□ -1.06
TRAPPC1-202ENST00000540486 RHBDD2Q6NTF9 364 aa8.4□□□□□ -1.06
TRAPPC1-202ENST00000540486 TTC23LQ6PF05 361 aa8.4□□□□□ -1.06
TRAPPC1-202ENST00000540486 SPESP1Q6UW49 350 aa8.4□□□□□ -1.06
TRAPPC1-202ENST00000540486 TRIM73Q86UV7 250 aa8.4□□□□□ -1.06
TRAPPC1-202ENST00000540486 IFT20Q8IY31 132 aa8.4□□□□□ -1.06
TRAPPC1-202ENST00000540486 LRRC56Q8IYG6 542 aaPredicted RBP8.4□□□□□ -1.06
TRAPPC1-202ENST00000540486 GPR135Q8IZ08 494 aa8.4□□□□□ -1.06
TRAPPC1-202ENST00000540486 PPM1NQ8N819 430 aa8.4□□□□□ -1.06
TRAPPC1-202ENST00000540486 FBXO15Q8NCQ5 510 aaPredicted RBP8.4□□□□□ -1.06
TRAPPC1-202ENST00000540486 WFDC11Q8NEX6 87 aa8.4□□□□□ -1.06
TRAPPC1-202ENST00000540486 OR2A1Q8NGT9 310 aa8.4□□□□□ -1.06
TRAPPC1-202ENST00000540486 OR9A1PQ8NGU1 263 aa8.4□□□□□ -1.06
TRAPPC1-202ENST00000540486 HMGCLL1Q8TB92 370 aa8.4□□□□□ -1.06
TRAPPC1-202ENST00000540486 MAGEC3Q8TD91 643 aa8.4□□□□□ -1.06
TRAPPC1-202ENST00000540486 ANKRD49Q8WVL7 239 aa8.4□□□□□ -1.06
TRAPPC1-202ENST00000540486 CDKL2Q92772 493 aa8.4□□□□□ -1.06
TRAPPC1-202ENST00000540486 PDLIM5Q96HC4 596 aaKnown RBP8.4□□□□□ -1.06
TRAPPC1-202ENST00000540486 VPS39Q96JC1 886 aa8.4□□□□□ -1.06
TRAPPC1-202ENST00000540486 FOPNLQ96NB1 174 aa8.4□□□□□ -1.06
TRAPPC1-202ENST00000540486 FMO2Q99518 471 aa8.4□□□□□ -1.06
TRAPPC1-202ENST00000540486 RBBP8Q99708 897 aa8.4□□□□□ -1.06
TRAPPC1-202ENST00000540486 CPNE1Q99829 537 aa8.4□□□□□ -1.06
TRAPPC1-202ENST00000540486 VKORC1Q9BQB6 163 aa8.4□□□□□ -1.06
TRAPPC1-202ENST00000540486 FUT8Q9BYC5 575 aa8.4□□□□□ -1.06
TRAPPC1-202ENST00000540486 CDC42EP4Q9H3Q1 356 aaKnown RBP8.4□□□□□ -1.06
TRAPPC1-202ENST00000540486 CAB39LQ9H9S4 337 aa8.4□□□□□ -1.06
TRAPPC1-202ENST00000540486 NSMCE4AQ9NXX6 385 aa8.4□□□□□ -1.06
TRAPPC1-202ENST00000540486 MTRF1LQ9UGC7 380 aaKnown RBP8.4□□□□□ -1.06
TRAPPC1-202ENST00000540486 TRMT6Q9UJA5 497 aaKnown RBP8.4□□□□□ -1.06
TRAPPC1-202ENST00000540486 SLC39A10Q9ULF5 831 aa8.4□□□□□ -1.06
TRAPPC1-202ENST00000540486 PDE10AQ9Y233 779 aa8.4□□□□□ -1.06
TRAPPC1-202ENST00000540486 KLHL20Q9Y2M5 609 aa8.4□□□□□ -1.06
TRAPPC1-202ENST00000540486 DYRK1BQ9Y463 629 aa8.4□□□□□ -1.06
TRAPPC1-202ENST00000540486 AP1M2Q9Y6Q5 423 aa8.4□□□□□ -1.06
TRAPPC1-202ENST00000540486 MXRA5Q9NR99 2828 aa8.4□□□□□ -1.06
TRAPPC1-202ENST00000540486 PCM1Q15154 2024 aa8.39□□□□□ -1.07
TRAPPC1-202ENST00000540486 RNF212BA8MTL3 300 aa8.39□□□□□ -1.07
TRAPPC1-202ENST00000540486 MATN2O00339 956 aa8.39□□□□□ -1.07
TRAPPC1-202ENST00000540486 SOCS6O14544 535 aa8.39□□□□□ -1.07
TRAPPC1-202ENST00000540486 ZBTB14O43829 449 aa8.39□□□□□ -1.07
TRAPPC1-202ENST00000540486 CTAG2O75638 210 aa8.39□□□□□ -1.07
TRAPPC1-202ENST00000540486 RPN2P04844 631 aa8.39□□□□□ -1.07
TRAPPC1-202ENST00000540486 CTSBP07858 339 aa8.39□□□□□ -1.07
TRAPPC1-202ENST00000540486 MSX1P28360 303 aa8.39□□□□□ -1.07
TRAPPC1-202ENST00000540486 HOXC12P31275 282 aa8.39□□□□□ -1.07
TRAPPC1-202ENST00000540486 GMPRP36959 345 aa8.39□□□□□ -1.07
TRAPPC1-202ENST00000540486 GP5P40197 560 aa8.39□□□□□ -1.07
TRAPPC1-202ENST00000540486 IL2P60568 153 aa8.39□□□□□ -1.07
TRAPPC1-202ENST00000540486 PPP2R2BQ00005 443 aa8.39□□□□□ -1.07
TRAPPC1-202ENST00000540486 KIR2DS3Q14952 304 aa8.39□□□□□ -1.07
TRAPPC1-202ENST00000540486 PHKG1Q16816 387 aa8.39□□□□□ -1.07
TRAPPC1-202ENST00000540486 SLC5A12Q1EHB4 618 aa8.39□□□□□ -1.07
TRAPPC1-202ENST00000540486 TUBB8Q3ZCM7 444 aa8.39□□□□□ -1.07
TRAPPC1-202ENST00000540486 LCE2AQ5TA79 106 aaPredicted RBP8.39□□□□□ -1.07
TRAPPC1-202ENST00000540486 GRTP1Q5TC63 336 aa8.39□□□□□ -1.07
TRAPPC1-202ENST00000540486 TMEM214Q6NUQ4 689 aaKnown RBP8.39□□□□□ -1.07
TRAPPC1-202ENST00000540486 SUSD1Q6UWL2 747 aa8.39□□□□□ -1.07
TRAPPC1-202ENST00000540486 CDHR3Q6ZTQ4 885 aa8.39□□□□□ -1.07
TRAPPC1-202ENST00000540486 UBE2R2Q712K3 238 aaPredicted RBP8.39□□□□□ -1.07
TRAPPC1-202ENST00000540486 TAX1BP1Q86VP1 789 aa8.39□□□□□ -1.07
TRAPPC1-202ENST00000540486 CTAGE3PQ8IX95 158 aa8.39□□□□□ -1.07
TRAPPC1-202ENST00000540486 ZNF480Q8WV37 535 aa8.39□□□□□ -1.07
TRAPPC1-202ENST00000540486 ASB5Q8WWX0 329 aa8.39□□□□□ -1.07
TRAPPC1-202ENST00000540486 LINGO1Q96FE5 620 aa8.39□□□□□ -1.07
TRAPPC1-202ENST00000540486 RMND5BQ96G75 393 aaPredicted RBP8.39□□□□□ -1.07
TRAPPC1-202ENST00000540486 DMRTA2Q96SC8 542 aa8.39□□□□□ -1.07
TRAPPC1-202ENST00000540486 GPR22Q99680 433 aa8.39□□□□□ -1.07
TRAPPC1-202ENST00000540486 POLDIP3Q9BY77 421 aaKnown RBP8.39□□□□□ -1.07
TRAPPC1-202ENST00000540486 TXLNGYQ9BZA5 131 aa8.39□□□□□ -1.07
TRAPPC1-202ENST00000540486 TSPYL1Q9H0U9 437 aa8.39□□□□□ -1.07
TRAPPC1-202ENST00000540486 LIME1Q9H400 295 aa8.39□□□□□ -1.07
TRAPPC1-202ENST00000540486 ADAM21Q9UKJ8 722 aa8.39□□□□□ -1.07
TRAPPC1-202ENST00000540486 PLEKHA6Q9Y2H5 1048 aa8.39□□□□□ -1.07
TRAPPC1-202ENST00000540486 MRPS2Q9Y399 296 aaKnown RBP8.39□□□□□ -1.07
TRAPPC1-202ENST00000540486 E7ENX8 843 aa8.38□□□□□ -1.07
TRAPPC1-202ENST00000540486 H3BMH7 237 aa8.38□□□□□ -1.07
TRAPPC1-202ENST00000540486 CDC7O00311 574 aa8.38□□□□□ -1.07
TRAPPC1-202ENST00000540486 SLC16A5O15375 505 aa8.38□□□□□ -1.07
TRAPPC1-202ENST00000540486 KDM1AO60341 852 aa8.38□□□□□ -1.07
TRAPPC1-202ENST00000540486 CNOT3O75175 753 aaKnown RBP8.38□□□□□ -1.07
TRAPPC1-202ENST00000540486 ACSL3O95573 720 aa8.38□□□□□ -1.07
TRAPPC1-202ENST00000540486 SLC16A8O95907 504 aa8.38□□□□□ -1.07
TRAPPC1-202ENST00000540486 CATP04040 527 aaKnown RBP8.38□□□□□ -1.07
TRAPPC1-202ENST00000540486 VSIG8P0DPA2 414 aa8.38□□□□□ -1.07
TRAPPC1-202ENST00000540486 ZNF37AP17032 561 aaPredicted RBP8.38□□□□□ -1.07
TRAPPC1-202ENST00000540486 PSMB5P28074 263 aa8.38□□□□□ -1.07
TRAPPC1-202ENST00000540486 IMPA1P29218 277 aa8.38□□□□□ -1.07
TRAPPC1-202ENST00000540486 STX2P32856 288 aa8.38□□□□□ -1.07
TRAPPC1-202ENST00000540486 SPRP35270 261 aaPredicted RBP8.38□□□□□ -1.07
TRAPPC1-202ENST00000540486 GRIA3P42263 894 aa8.38□□□□□ -1.07
TRAPPC1-202ENST00000540486 RGS4P49798 205 aa8.38□□□□□ -1.07
TRAPPC1-202ENST00000540486 POU4F1Q01851 419 aa8.38□□□□□ -1.07
TRAPPC1-202ENST00000540486 TAP2Q03519 686 aa8.38□□□□□ -1.07
TRAPPC1-202ENST00000540486 TFF3Q07654 80 aa8.38□□□□□ -1.07
TRAPPC1-202ENST00000540486 USP10Q14694 798 aaKnown RBP8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms