RNA–Protein interactions for RNA: ENST00000539320.2

SCARB1-206, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 720 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-206ENST00000539320 PYROXD1Q8WU10 500 aa20.91■□□□□ 0.94
SCARB1-206ENST00000539320 ANKRD49Q8WVL7 239 aa20.91■□□□□ 0.94
SCARB1-206ENST00000539320 TBC1D20Q96BZ9 403 aa20.91■□□□□ 0.94
SCARB1-206ENST00000539320 TAAR6Q96RI8 345 aa20.91■□□□□ 0.94
SCARB1-206ENST00000539320 ERP44Q9BS26 406 aa20.91■□□□□ 0.94
SCARB1-206ENST00000539320 SAYSD1Q9NPB0 183 aa20.91■□□□□ 0.94
SCARB1-206ENST00000539320 WHRNQ9P202 907 aa20.91■□□□□ 0.94
SCARB1-206ENST00000539320 A8MUI8 341 aa20.9■□□□□ 0.94
SCARB1-206ENST00000539320 EIF3HO15372 352 aaKnown RBP eCLIP20.9■□□□□ 0.94
SCARB1-206ENST00000539320 RAD51CO43502 376 aa20.9■□□□□ 0.94
SCARB1-206ENST00000539320 B3GALT4O96024 378 aa20.9■□□□□ 0.94
SCARB1-206ENST00000539320 MAMDC2Q7Z304 686 aaPredicted RBP20.9■□□□□ 0.94
SCARB1-206ENST00000539320 ANKRD53Q8N9V6 530 aa20.9■□□□□ 0.94
SCARB1-206ENST00000539320 TRPV3Q8NET8 790 aa20.9■□□□□ 0.94
SCARB1-206ENST00000539320 SPATA4Q8NEY3 305 aa20.9■□□□□ 0.94
SCARB1-206ENST00000539320 UTP15Q8TED0 518 aaKnown RBP20.9■□□□□ 0.94
SCARB1-206ENST00000539320 NR4A3Q92570 626 aa20.9■□□□□ 0.94
SCARB1-206ENST00000539320 CDKL2Q92772 493 aa20.9■□□□□ 0.94
SCARB1-206ENST00000539320 ZNF354BQ96LW1 612 aa20.9■□□□□ 0.94
SCARB1-206ENST00000539320 LPAR4Q99677 370 aa20.9■□□□□ 0.94
SCARB1-206ENST00000539320 SLC6A16Q9GZN6 736 aa20.9■□□□□ 0.94
SCARB1-206ENST00000539320 KCNK13Q9HB14 408 aa20.9■□□□□ 0.94
SCARB1-206ENST00000539320 OSGIN2Q9Y236 505 aa20.9■□□□□ 0.94
SCARB1-206ENST00000539320 UTP20O75691 2785 aaKnown RBP20.9■□□□□ 0.94
SCARB1-206ENST00000539320 CTAGE15A4D2H0 777 aa20.89■□□□□ 0.93
SCARB1-206ENST00000539320 URADA6NGE7 173 aa20.89■□□□□ 0.93
SCARB1-206ENST00000539320 CHST10O43529 356 aa20.89■□□□□ 0.93
SCARB1-206ENST00000539320 PRAMEF2O60811 474 aa20.89■□□□□ 0.93
SCARB1-206ENST00000539320 PIAS1O75925 651 aa20.89■□□□□ 0.93
SCARB1-206ENST00000539320 SSTR1P30872 391 aa20.89■□□□□ 0.93
SCARB1-206ENST00000539320 TDGF1P3P51864 188 aa20.89■□□□□ 0.93
SCARB1-206ENST00000539320 POU4F1Q01851 419 aa20.89■□□□□ 0.93
SCARB1-206ENST00000539320 ACTN3Q08043 901 aaPredicted RBP20.89■□□□□ 0.93
SCARB1-206ENST00000539320 USP10Q14694 798 aaKnown RBP20.89■□□□□ 0.93
SCARB1-206ENST00000539320 RBBP5Q15291 538 aaKnown RBP20.89■□□□□ 0.93
SCARB1-206ENST00000539320 ZNF324BQ6AW86 544 aaPredicted RBP20.89■□□□□ 0.93
SCARB1-206ENST00000539320 FCRLBQ6BAA4 426 aa20.89■□□□□ 0.93
SCARB1-206ENST00000539320 MAATS1Q7Z4T9 603 aa20.89■□□□□ 0.93
SCARB1-206ENST00000539320 CTAGE6Q86UF2 777 aa20.89■□□□□ 0.93
SCARB1-206ENST00000539320 KLHDC8AQ8IYD2 350 aa20.89■□□□□ 0.93
SCARB1-206ENST00000539320 M1APQ8TC57 530 aa20.89■□□□□ 0.93
SCARB1-206ENST00000539320 TSPAN17Q96FV3 270 aa20.89■□□□□ 0.93
SCARB1-206ENST00000539320 DERL2Q9GZP9 239 aa20.89■□□□□ 0.93
SCARB1-206ENST00000539320 MMP25Q9NPA2 562 aa20.89■□□□□ 0.93
SCARB1-206ENST00000539320 STMN3Q9NZ72 180 aa20.89■□□□□ 0.93
SCARB1-206ENST00000539320 TXNDC16Q9P2K2 825 aa20.89■□□□□ 0.93
SCARB1-206ENST00000539320 WDR47O94967 919 aa20.88■□□□□ 0.93
SCARB1-206ENST00000539320 WISP3O95389 354 aaPredicted RBP20.88■□□□□ 0.93
SCARB1-206ENST00000539320 MYBL2P10244 700 aa20.88■□□□□ 0.93
SCARB1-206ENST00000539320 HNF4AP41235 474 aa20.88■□□□□ 0.93
SCARB1-206ENST00000539320 SLC6A12P48065 614 aa20.88■□□□□ 0.93
SCARB1-206ENST00000539320 OR4D2P58180 307 aa20.88■□□□□ 0.93
SCARB1-206ENST00000539320 RAB8AP61006 207 aa20.88■□□□□ 0.93
SCARB1-206ENST00000539320 C2orf54Q08AI8 447 aa20.88■□□□□ 0.93
SCARB1-206ENST00000539320 H3F3CQ6NXT2 135 aa20.88■□□□□ 0.93
SCARB1-206ENST00000539320 BEST3Q8N1M1 668 aa20.88■□□□□ 0.93
SCARB1-206ENST00000539320 RHBDF1Q96CC6 855 aa20.88■□□□□ 0.93
SCARB1-206ENST00000539320 CPNE1Q99829 537 aa20.88■□□□□ 0.93
SCARB1-206ENST00000539320 UNKQ9C0B0 810 aaKnown RBP20.88■□□□□ 0.93
SCARB1-206ENST00000539320 CLK4Q9HAZ1 481 aaKnown RBP20.88■□□□□ 0.93
SCARB1-206ENST00000539320 ABI3Q9P2A4 366 aa20.88■□□□□ 0.93
SCARB1-206ENST00000539320 MTO1Q9Y2Z2 717 aaKnown RBP20.88■□□□□ 0.93
SCARB1-206ENST00000539320 CXorf49A8MYA2 514 aaPredicted RBP20.87■□□□□ 0.93
SCARB1-206ENST00000539320 PHGDHO43175 533 aaKnown RBP20.87■□□□□ 0.93
SCARB1-206ENST00000539320 B4GALT2O60909 372 aa20.87■□□□□ 0.93
SCARB1-206ENST00000539320 DNAJB6O75190 326 aa20.87■□□□□ 0.93
SCARB1-206ENST00000539320 RASAL1O95294 804 aa20.87■□□□□ 0.93
SCARB1-206ENST00000539320 CLDN1O95832 211 aa20.87■□□□□ 0.93
SCARB1-206ENST00000539320 SERPINA6P08185 405 aa20.87■□□□□ 0.93
SCARB1-206ENST00000539320 GNAZP19086 355 aa20.87■□□□□ 0.93
SCARB1-206ENST00000539320 PER3P56645 1201 aa20.87■□□□□ 0.93
SCARB1-206ENST00000539320 HYAL2Q12891 473 aa20.87■□□□□ 0.93
SCARB1-206ENST00000539320 MEP1AQ16819 746 aa20.87■□□□□ 0.93
SCARB1-206ENST00000539320 C18orf21Q32NC0 220 aaPredicted RBP20.87■□□□□ 0.93
SCARB1-206ENST00000539320 TOR1AIP1Q5JTV8 583 aa20.87■□□□□ 0.93
SCARB1-206ENST00000539320 ACER2Q5QJU3 275 aa20.87■□□□□ 0.93
SCARB1-206ENST00000539320 QSOX2Q6ZRP7 698 aa20.87■□□□□ 0.93
SCARB1-206ENST00000539320 CRLF3Q8IUI8 442 aa20.87■□□□□ 0.93
SCARB1-206ENST00000539320 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP20.87■□□□□ 0.93
SCARB1-206ENST00000539320 CREB3L4Q8TEY5 395 aa20.87■□□□□ 0.93
SCARB1-206ENST00000539320 GPR22Q99680 433 aa20.87■□□□□ 0.93
SCARB1-206ENST00000539320 RBBP8Q99708 897 aa20.87■□□□□ 0.93
SCARB1-206ENST00000539320 CAB39LQ9H9S4 337 aa20.87■□□□□ 0.93
SCARB1-206ENST00000539320 WWOXQ9NZC7 414 aa20.87■□□□□ 0.93
SCARB1-206ENST00000539320 GRHL1Q9NZI5 618 aa20.87■□□□□ 0.93
SCARB1-206ENST00000539320 TCRBV9S1A1TA0A576 114 aa20.86■□□□□ 0.93
SCARB1-206ENST00000539320 NCF1BA6NI72 391 aaPredicted RBP20.86■□□□□ 0.93
SCARB1-206ENST00000539320 NCF1CA8MVU1 366 aaPredicted RBP20.86■□□□□ 0.93
SCARB1-206ENST00000539320 C4orf51C9J302 202 aa20.86■□□□□ 0.93
SCARB1-206ENST00000539320 PSMD12O00232 456 aaPredicted RBP20.86■□□□□ 0.93
SCARB1-206ENST00000539320 LRRTM2O43300 516 aa20.86■□□□□ 0.93
SCARB1-206ENST00000539320 CRYABP02511 175 aaKnown RBP20.86■□□□□ 0.93
SCARB1-206ENST00000539320 RNH1P13489 461 aaKnown RBP20.86■□□□□ 0.93
SCARB1-206ENST00000539320 NCF1P14598 390 aaPredicted RBP20.86■□□□□ 0.93
SCARB1-206ENST00000539320 GP5P40197 560 aa20.86■□□□□ 0.93
SCARB1-206ENST00000539320 GDF5P43026 501 aa20.86■□□□□ 0.93
SCARB1-206ENST00000539320 SLC26A5P58743 744 aa20.86■□□□□ 0.93
SCARB1-206ENST00000539320 TAS2R50P59544 299 aa20.86■□□□□ 0.93
SCARB1-206ENST00000539320 SLBPQ14493 270 aaKnown RBP eCLIP20.86■□□□□ 0.93
SCARB1-206ENST00000539320 TGFBIQ15582 683 aa20.86■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms