RNA–Protein interactions for RNA: ENST00000539197.5

CCDC7-209, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-209ENST00000539197 A8MVM7 634 aa3.45□□□□□ -1.86
CCDC7-209ENST00000539197 ATP5BP06576 529 aaKnown RBP3.45□□□□□ -1.86
CCDC7-209ENST00000539197 CD1DP15813 335 aa3.45□□□□□ -1.86
CCDC7-209ENST00000539197 ZNF32P17041 273 aa3.45□□□□□ -1.86
CCDC7-209ENST00000539197 EIF2DP41214 584 aaKnown RBP3.45□□□□□ -1.86
CCDC7-209ENST00000539197 GCKRQ14397 625 aa3.45□□□□□ -1.86
CCDC7-209ENST00000539197 IL11RAQ14626 422 aa3.45□□□□□ -1.86
CCDC7-209ENST00000539197 SPANXN4Q5MJ08 99 aa3.45□□□□□ -1.86
CCDC7-209ENST00000539197 HYIQ5T013 277 aa3.45□□□□□ -1.86
CCDC7-209ENST00000539197 PAMR1Q6UXH9 720 aa3.45□□□□□ -1.86
CCDC7-209ENST00000539197 ZBTB49Q6ZSB9 765 aa3.45□□□□□ -1.86
CCDC7-209ENST00000539197 MCM10Q7L590 875 aa3.45□□□□□ -1.86
CCDC7-209ENST00000539197 OR6T1Q8NGN1 323 aa3.45□□□□□ -1.86
CCDC7-209ENST00000539197 MUS81Q96NY9 551 aa3.45□□□□□ -1.86
CCDC7-209ENST00000539197 GPR88Q9GZN0 384 aa3.45□□□□□ -1.86
CCDC7-209ENST00000539197 RNF121Q9H920 327 aa3.45□□□□□ -1.86
CCDC7-209ENST00000539197 NSMCE4AQ9NXX6 385 aa3.45□□□□□ -1.86
CCDC7-209ENST00000539197 CPSF2Q9P2I0 782 aaKnown RBP3.45□□□□□ -1.86
CCDC7-209ENST00000539197 POLKQ9UBT6 870 aa3.45□□□□□ -1.86
CCDC7-209ENST00000539197 PCDHGB4Q9UN71 923 aa3.45□□□□□ -1.86
CCDC7-209ENST00000539197 GPR34Q9UPC5 381 aa3.45□□□□□ -1.86
CCDC7-209ENST00000539197 RSF1Q96T23 1441 aaPredicted RBP3.44□□□□□ -1.86
CCDC7-209ENST00000539197 AP5Z1O43299 807 aa3.44□□□□□ -1.86
CCDC7-209ENST00000539197 SPRY1O43609 319 aaPredicted RBP3.44□□□□□ -1.86
CCDC7-209ENST00000539197 CD59P13987 128 aa3.44□□□□□ -1.86
CCDC7-209ENST00000539197 FCGR2BP31994 310 aaPredicted RBP3.44□□□□□ -1.86
CCDC7-209ENST00000539197 FCGR2CP31995 323 aa3.44□□□□□ -1.86
CCDC7-209ENST00000539197 EIF5P55010 431 aaKnown RBP3.44□□□□□ -1.86
CCDC7-209ENST00000539197 UBASH3AP57075 661 aa3.44□□□□□ -1.86
CCDC7-209ENST00000539197 ILF2Q12905 390 aaKnown RBP3.44□□□□□ -1.86
CCDC7-209ENST00000539197 LTB4RQ15722 352 aa3.44□□□□□ -1.86
CCDC7-209ENST00000539197 MEA1Q16626 185 aa3.44□□□□□ -1.86
CCDC7-209ENST00000539197 SLC22A6Q4U2R8 563 aa3.44□□□□□ -1.86
CCDC7-209ENST00000539197 CAMKMTQ7Z624 323 aa3.44□□□□□ -1.86
CCDC7-209ENST00000539197 PAPOLGQ9BWT3 736 aaKnown RBP3.44□□□□□ -1.86
CCDC7-209ENST00000539197 CCDC68Q9H2F9 335 aa3.44□□□□□ -1.86
CCDC7-209ENST00000539197 RIMS4Q9H426 269 aaPredicted RBP3.44□□□□□ -1.86
CCDC7-209ENST00000539197 CHORDC1Q9UHD1 332 aaPredicted RBP3.44□□□□□ -1.86
CCDC7-209ENST00000539197 GLOD5A6NK44 160 aa3.43□□□□□ -1.86
CCDC7-209ENST00000539197 C17orf105B2RV13 164 aa3.43□□□□□ -1.86
CCDC7-209ENST00000539197 E7ENQ6 273 aa3.43□□□□□ -1.86
CCDC7-209ENST00000539197 SIGLEC5O15389 551 aa3.43□□□□□ -1.86
CCDC7-209ENST00000539197 IGKV3-11P04433 115 aa3.43□□□□□ -1.86
CCDC7-209ENST00000539197 YES1P07947 543 aa3.43□□□□□ -1.86
CCDC7-209ENST00000539197 HNRNPA3P51991 378 aaKnown RBP3.43□□□□□ -1.86
CCDC7-209ENST00000539197 CRYBA2P53672 197 aa3.43□□□□□ -1.86
CCDC7-209ENST00000539197 STK4Q13043 487 aa3.43□□□□□ -1.86
CCDC7-209ENST00000539197 SIM2Q14190 667 aaPredicted RBP3.43□□□□□ -1.86
CCDC7-209ENST00000539197 PTPRCAPQ14761 206 aa3.43□□□□□ -1.86
CCDC7-209ENST00000539197 MZT2BQ6NZ67 158 aa3.43□□□□□ -1.86
CCDC7-209ENST00000539197 DET1Q7L5Y6 550 aa3.43□□□□□ -1.86
CCDC7-209ENST00000539197 PIGWQ7Z7B1 504 aa3.43□□□□□ -1.86
CCDC7-209ENST00000539197 ADGRD2Q7Z7M1 963 aa3.43□□□□□ -1.86
CCDC7-209ENST00000539197 IQCHQ86VS3 1027 aa3.43□□□□□ -1.86
CCDC7-209ENST00000539197 DNAAF5Q86Y56 855 aa3.43□□□□□ -1.86
CCDC7-209ENST00000539197 NAXDQ8IW45 347 aa3.43□□□□□ -1.86
CCDC7-209ENST00000539197 DND1Q8IYX4 353 aaKnown RBP3.43□□□□□ -1.86
CCDC7-209ENST00000539197 PGM2Q96G03 612 aa3.43□□□□□ -1.86
CCDC7-209ENST00000539197 WDR41Q9HAD4 459 aa3.43□□□□□ -1.86
CCDC7-209ENST00000539197 PIH1D3Q9NQM4 214 aaKnown RBP3.43□□□□□ -1.86
CCDC7-209ENST00000539197 A8MU76 341 aa3.42□□□□□ -1.86
CCDC7-209ENST00000539197 KBTBD11O94819 623 aa3.42□□□□□ -1.86
CCDC7-209ENST00000539197 OR6B1O95007 311 aa3.42□□□□□ -1.86
CCDC7-209ENST00000539197 PORP16435 677 aaPredicted RBP3.42□□□□□ -1.86
CCDC7-209ENST00000539197 CASP2P42575 452 aa3.42□□□□□ -1.86
CCDC7-209ENST00000539197 MAPRE1Q15691 268 aaKnown RBP3.42□□□□□ -1.86
CCDC7-209ENST00000539197 POM121L1PQ3SYA9 428 aa3.42□□□□□ -1.86
CCDC7-209ENST00000539197 LURAP1Q96LR2 239 aa3.42□□□□□ -1.86
CCDC7-209ENST00000539197 GCNAQ96QF7 691 aa3.42□□□□□ -1.86
CCDC7-209ENST00000539197 SP140LQ9H930 580 aa3.42□□□□□ -1.86
CCDC7-209ENST00000539197 PHPT1Q9NRX4 125 aaPredicted RBP3.42□□□□□ -1.86
CCDC7-209ENST00000539197 DEPPQ9NTK1 212 aa3.42□□□□□ -1.86
CCDC7-209ENST00000539197 TBC1D7Q9P0N9 293 aa3.42□□□□□ -1.86
CCDC7-209ENST00000539197 SPATA2Q9UM82 520 aa3.42□□□□□ -1.86
CCDC7-209ENST00000539197 MRPL11Q9Y3B7 192 aaKnown RBP3.42□□□□□ -1.86
CCDC7-209ENST00000539197 SNX8Q9Y5X2 465 aa3.42□□□□□ -1.86
CCDC7-209ENST00000539197 HOXC4P09017 264 aaPredicted RBP3.41□□□□□ -1.86
CCDC7-209ENST00000539197 PCGF2P35227 344 aa3.41□□□□□ -1.86
CCDC7-209ENST00000539197 NAAAQ02083 359 aa3.41□□□□□ -1.86
CCDC7-209ENST00000539197 CACNG1Q06432 222 aa3.41□□□□□ -1.86
CCDC7-209ENST00000539197 LACTB2Q53H82 288 aaPredicted RBP3.41□□□□□ -1.86
CCDC7-209ENST00000539197 ZRANB3Q5FWF4 1079 aa3.41□□□□□ -1.86
CCDC7-209ENST00000539197 SPATA1Q5VX52 437 aa3.41□□□□□ -1.86
CCDC7-209ENST00000539197 SUSD4Q5VX71 490 aa3.41□□□□□ -1.86
CCDC7-209ENST00000539197 WSCD1Q658N2 575 aa3.41□□□□□ -1.86
CCDC7-209ENST00000539197 SECISBP2LQ93073 1101 aaKnown RBP3.41□□□□□ -1.86
CCDC7-209ENST00000539197 RBM41Q96IZ5 413 aaKnown RBP3.41□□□□□ -1.86
CCDC7-209ENST00000539197 LINC00615Q96LM1 132 aaPredicted RBP3.41□□□□□ -1.86
CCDC7-209ENST00000539197 CCDC106Q9BWC9 280 aa3.41□□□□□ -1.86
CCDC7-209ENST00000539197 CHMP4AQ9BY43 222 aa3.41□□□□□ -1.86
CCDC7-209ENST00000539197 KLHL4Q9C0H6 718 aa3.41□□□□□ -1.86
CCDC7-209ENST00000539197 ARMCX1Q9P291 453 aa3.41□□□□□ -1.86
CCDC7-209ENST00000539197 KLF18A0A0U1RQI7 1052 aa3.4□□□□□ -1.87
CCDC7-209ENST00000539197 H3BMM5 538 aa3.4□□□□□ -1.87
CCDC7-209ENST00000539197 CLDN4O14493 209 aa3.4□□□□□ -1.87
CCDC7-209ENST00000539197 BEST1O76090 585 aa3.4□□□□□ -1.87
CCDC7-209ENST00000539197 RECQL5O94762 991 aaPredicted RBP3.4□□□□□ -1.87
CCDC7-209ENST00000539197 ABCB1P08183 1280 aaPredicted RBP3.4□□□□□ -1.87
CCDC7-209ENST00000539197 HCKP08631 526 aa3.4□□□□□ -1.87
CCDC7-209ENST00000539197 ACTN2P35609 894 aa3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms