RNA–Protein interactions for RNA: ENST00000538970.5

VAMP1-206, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best)

Gene VAMP1, Length 567 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-206ENST00000538970 ASIC3Q9UHC3 531 aa11.76□□□□□ -0.53
VAMP1-206ENST00000538970 PABPN1LA6NDY0 278 aaKnown RBP11.75□□□□□ -0.53
VAMP1-206ENST00000538970 GABRR3A8MPY1 467 aa11.75□□□□□ -0.53
VAMP1-206ENST00000538970 CHST10O43529 356 aa11.75□□□□□ -0.53
VAMP1-206ENST00000538970 DNAJB6O75190 326 aa11.75□□□□□ -0.53
VAMP1-206ENST00000538970 NEURL1O76050 574 aa11.75□□□□□ -0.53
VAMP1-206ENST00000538970 B3GALT4O96024 378 aa11.75□□□□□ -0.53
VAMP1-206ENST00000538970 ENO2P09104 434 aaPredicted RBP11.75□□□□□ -0.53
VAMP1-206ENST00000538970 JAK1P23458 1154 aa11.75□□□□□ -0.53
VAMP1-206ENST00000538970 EEF1DP29692 281 aaKnown RBP11.75□□□□□ -0.53
VAMP1-206ENST00000538970 SCTRP47872 440 aa11.75□□□□□ -0.53
VAMP1-206ENST00000538970 OR4D2P58180 307 aa11.75□□□□□ -0.53
VAMP1-206ENST00000538970 SKP1P63208 163 aa11.75□□□□□ -0.53
VAMP1-206ENST00000538970 OLR1P78380 273 aa11.75□□□□□ -0.53
VAMP1-206ENST00000538970 ACTN3Q08043 901 aaPredicted RBP11.75□□□□□ -0.53
VAMP1-206ENST00000538970 BBS9Q3SYG4 887 aa11.75□□□□□ -0.53
VAMP1-206ENST00000538970 CATSPEREQ5SY80 951 aa11.75□□□□□ -0.53
VAMP1-206ENST00000538970 TEDDM1Q5T9Z0 273 aa11.75□□□□□ -0.53
VAMP1-206ENST00000538970 SPINK14Q6IE38 97 aa11.75□□□□□ -0.53
VAMP1-206ENST00000538970 NIPAL1Q6NVV3 410 aa11.75□□□□□ -0.53
VAMP1-206ENST00000538970 SLC35F6Q8N357 371 aa11.75□□□□□ -0.53
VAMP1-206ENST00000538970 GPATCH11Q8N954 259 aa11.75□□□□□ -0.53
VAMP1-206ENST00000538970 TMEM178AQ8NBL3 297 aa11.75□□□□□ -0.53
VAMP1-206ENST00000538970 ELP5Q8TE02 316 aa11.75□□□□□ -0.53
VAMP1-206ENST00000538970 SLC5A11Q8WWX8 675 aa11.75□□□□□ -0.53
VAMP1-206ENST00000538970 ATL1Q8WXF7 558 aa11.75□□□□□ -0.53
VAMP1-206ENST00000538970 NEIL2Q969S2 332 aa11.75□□□□□ -0.53
VAMP1-206ENST00000538970 GPR137Q96N19 417 aa11.75□□□□□ -0.53
VAMP1-206ENST00000538970 FRMD6Q96NE9 622 aa11.75□□□□□ -0.53
VAMP1-206ENST00000538970 OLFM1Q99784 485 aa11.75□□□□□ -0.53
VAMP1-206ENST00000538970 WDR83Q9BRX9 315 aaKnown RBP11.75□□□□□ -0.53
VAMP1-206ENST00000538970 DDX47Q9H0S4 455 aaKnown RBP11.75□□□□□ -0.53
VAMP1-206ENST00000538970 ZFP69BQ9UJL9 534 aa11.75□□□□□ -0.53
VAMP1-206ENST00000538970 IKZF3Q9UKT9 509 aa11.75□□□□□ -0.53
VAMP1-206ENST00000538970 CORO1CQ9ULV4 474 aaPredicted RBP11.75□□□□□ -0.53
VAMP1-206ENST00000538970 SNX12Q9UMY4 172 aa11.75□□□□□ -0.53
VAMP1-206ENST00000538970 CTAGE15A4D2H0 777 aa11.74□□□□□ -0.53
VAMP1-206ENST00000538970 FAM227AF5H4B4 570 aa11.74□□□□□ -0.53
VAMP1-206ENST00000538970 CES2O00748 559 aa11.74□□□□□ -0.53
VAMP1-206ENST00000538970 DIAPH2O60879 1101 aa11.74□□□□□ -0.53
VAMP1-206ENST00000538970 GUCA1CO95843 209 aa11.74□□□□□ -0.53
VAMP1-206ENST00000538970 SERPIND1P05546 499 aa11.74□□□□□ -0.53
VAMP1-206ENST00000538970 ZNF888P0CJ79 500 aaPredicted RBP11.74□□□□□ -0.53
VAMP1-206ENST00000538970 CD46P15529 392 aa11.74□□□□□ -0.53
VAMP1-206ENST00000538970 AHRP35869 848 aa11.74□□□□□ -0.53
VAMP1-206ENST00000538970 CASP6P55212 293 aa11.74□□□□□ -0.53
VAMP1-206ENST00000538970 TAS2R50P59544 299 aa11.74□□□□□ -0.53
VAMP1-206ENST00000538970 ADORA2A-AS1P86434 159 aa11.74□□□□□ -0.53
VAMP1-206ENST00000538970 REEP5Q00765 189 aa11.74□□□□□ -0.53
VAMP1-206ENST00000538970 ALDH6A1Q02252 535 aaKnown RBP11.74□□□□□ -0.53
VAMP1-206ENST00000538970 RGS1Q08116 209 aa11.74□□□□□ -0.53
VAMP1-206ENST00000538970 CSHL1Q14406 222 aa11.74□□□□□ -0.53
VAMP1-206ENST00000538970 C3AR1Q16581 482 aa11.74□□□□□ -0.53
VAMP1-206ENST00000538970 PPP1R3AQ16821 1122 aa11.74□□□□□ -0.53
VAMP1-206ENST00000538970 ZNF630Q2M218 657 aaPredicted RBP11.74□□□□□ -0.53
VAMP1-206ENST00000538970 FAM45BPQ6NSW5 357 aa11.74□□□□□ -0.53
VAMP1-206ENST00000538970 TRMT10BQ6PF06 316 aaKnown RBP11.74□□□□□ -0.53
VAMP1-206ENST00000538970 SBSNQ6UWP8 590 aa11.74□□□□□ -0.53
VAMP1-206ENST00000538970 ABHD13Q7L211 337 aa11.74□□□□□ -0.53
VAMP1-206ENST00000538970 GALNTL5Q7Z4T8 443 aa11.74□□□□□ -0.53
VAMP1-206ENST00000538970 CTAGE6Q86UF2 777 aa11.74□□□□□ -0.53
VAMP1-206ENST00000538970 SIAH3Q8IW03 269 aa11.74□□□□□ -0.53
VAMP1-206ENST00000538970 KIF2BQ8N4N8 673 aa11.74□□□□□ -0.53
VAMP1-206ENST00000538970 TBC1D19Q8N5T2 526 aa11.74□□□□□ -0.53
VAMP1-206ENST00000538970 FAM45AQ8TCE6 357 aa11.74□□□□□ -0.53
VAMP1-206ENST00000538970 UTP15Q8TED0 518 aaKnown RBP11.74□□□□□ -0.53
VAMP1-206ENST00000538970 MAGED4Q96JG8 741 aa11.74□□□□□ -0.53
VAMP1-206ENST00000538970 TSNARE1Q96NA8 513 aa11.74□□□□□ -0.53
VAMP1-206ENST00000538970 TRIM54Q9BYV2 358 aa11.74□□□□□ -0.53
VAMP1-206ENST00000538970 SLC6A16Q9GZN6 736 aa11.74□□□□□ -0.53
VAMP1-206ENST00000538970 TSPAN10Q9H1Z9 355 aaPredicted RBP11.74□□□□□ -0.53
VAMP1-206ENST00000538970 RUBCNLQ9H714 662 aa11.74□□□□□ -0.53
VAMP1-206ENST00000538970 PPANQ9NQ55 473 aaKnown RBP11.74□□□□□ -0.53
VAMP1-206ENST00000538970 TINAGQ9UJW2 476 aa11.74□□□□□ -0.53
VAMP1-206ENST00000538970 ITGB1BP2Q9UKP3 347 aa11.74□□□□□ -0.53
VAMP1-206ENST00000538970 ZNF835Q9Y2P0 537 aa11.74□□□□□ -0.53
VAMP1-206ENST00000538970 IGKV3D-11A0A0A0MRZ8 115 aa11.73□□□□□ -0.53
VAMP1-206ENST00000538970 SAGE2PA6NJ88 616 aa11.73□□□□□ -0.53
VAMP1-206ENST00000538970 CDK2AP1O14519 115 aa11.73□□□□□ -0.53
VAMP1-206ENST00000538970 NDC80O14777 642 aa11.73□□□□□ -0.53
VAMP1-206ENST00000538970 B4GALT2O60909 372 aa11.73□□□□□ -0.53
VAMP1-206ENST00000538970 MLYCDO95822 493 aa11.73□□□□□ -0.53
VAMP1-206ENST00000538970 SP1P08047 785 aa11.73□□□□□ -0.53
VAMP1-206ENST00000538970 ZNF37AP17032 561 aaPredicted RBP11.73□□□□□ -0.53
VAMP1-206ENST00000538970 IVDP26440 423 aa11.73□□□□□ -0.53
VAMP1-206ENST00000538970 HTR1EP28566 365 aa11.73□□□□□ -0.53
VAMP1-206ENST00000538970 TPP2P29144 1249 aaPredicted RBP11.73□□□□□ -0.53
VAMP1-206ENST00000538970 PTGER4P35408 488 aa11.73□□□□□ -0.53
VAMP1-206ENST00000538970 ELK3P41970 407 aa11.73□□□□□ -0.53
VAMP1-206ENST00000538970 OC90Q02509 493 aaPredicted RBP11.73□□□□□ -0.53
VAMP1-206ENST00000538970 HYAL2Q12891 473 aa11.73□□□□□ -0.53
VAMP1-206ENST00000538970 KRTCAP3Q53RY4 240 aa11.73□□□□□ -0.53
VAMP1-206ENST00000538970 HP1BP3Q5SSJ5 553 aaPredicted RBP11.73□□□□□ -0.53
VAMP1-206ENST00000538970 ZNF468Q5VIY5 522 aaPredicted RBP11.73□□□□□ -0.53
VAMP1-206ENST00000538970 STEAP4Q687X5 459 aa11.73□□□□□ -0.53
VAMP1-206ENST00000538970 SLC25A25Q6KCM7 469 aa11.73□□□□□ -0.53
VAMP1-206ENST00000538970 Q6ZPB1 254 aaPredicted RBP11.73□□□□□ -0.53
VAMP1-206ENST00000538970 QSOX2Q6ZRP7 698 aa11.73□□□□□ -0.53
VAMP1-206ENST00000538970 RPS19BP1Q86WX3 136 aaKnown RBP11.73□□□□□ -0.53
VAMP1-206ENST00000538970 HORMAD2Q8N7B1 307 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms