RNA–Protein interactions for RNA: ENST00000538456.3

SMARCA4-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 3

Gene SMARCA4, Length 738 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-206ENST00000538456 TBC1D20Q96BZ9 403 aa13.11□□□□□ -0.31
SMARCA4-206ENST00000538456 SEC16BQ96JE7 1060 aa13.11□□□□□ -0.31
SMARCA4-206ENST00000538456 DESI2Q9BSY9 194 aa13.11□□□□□ -0.31
SMARCA4-206ENST00000538456 TMUB1Q9BVT8 246 aa13.11□□□□□ -0.31
SMARCA4-206ENST00000538456 CCDC68Q9H2F9 335 aa13.11□□□□□ -0.31
SMARCA4-206ENST00000538456 FBXO6Q9NRD1 293 aaPredicted RBP13.11□□□□□ -0.31
SMARCA4-206ENST00000538456 INTS10Q9NVR2 710 aaKnown RBP13.11□□□□□ -0.31
SMARCA4-206ENST00000538456 VPS9D1Q9Y2B5 631 aa13.11□□□□□ -0.31
SMARCA4-206ENST00000538456 MED16Q9Y2X0 877 aa13.11□□□□□ -0.31
SMARCA4-206ENST00000538456 SLC22A7Q9Y694 548 aa13.11□□□□□ -0.31
SMARCA4-206ENST00000538456 ABCA2Q9BZC7 2435 aa13.11□□□□□ -0.31
SMARCA4-206ENST00000538456 USP27XA6NNY8 438 aa13.1□□□□□ -0.31
SMARCA4-206ENST00000538456 KLRC4-KLRK1H3BQV0 150 aa13.1□□□□□ -0.31
SMARCA4-206ENST00000538456 AP3B1O00203 1094 aa13.1□□□□□ -0.31
SMARCA4-206ENST00000538456 FCHO1O14526 889 aa13.1□□□□□ -0.31
SMARCA4-206ENST00000538456 PEX1O43933 1283 aa13.1□□□□□ -0.31
SMARCA4-206ENST00000538456 AVILO75366 819 aa13.1□□□□□ -0.31
SMARCA4-206ENST00000538456 ZWINTO95229 277 aa13.1□□□□□ -0.31
SMARCA4-206ENST00000538456 SERPIND1P05546 499 aa13.1□□□□□ -0.31
SMARCA4-206ENST00000538456 ENO3P13929 434 aaPredicted RBP13.1□□□□□ -0.31
SMARCA4-206ENST00000538456 PAMP19021 973 aa13.1□□□□□ -0.31
SMARCA4-206ENST00000538456 TFEBP19484 476 aa13.1□□□□□ -0.31
SMARCA4-206ENST00000538456 MAOAP21397 527 aa13.1□□□□□ -0.31
SMARCA4-206ENST00000538456 IL10P22301 178 aa13.1□□□□□ -0.31
SMARCA4-206ENST00000538456 JAK1P23458 1154 aa13.1□□□□□ -0.31
SMARCA4-206ENST00000538456 TRHRP34981 398 aaPredicted RBP13.1□□□□□ -0.31
SMARCA4-206ENST00000538456 GRK3P35626 688 aa13.1□□□□□ -0.31
SMARCA4-206ENST00000538456 NR0B1P51843 470 aaKnown RBP13.1□□□□□ -0.31
SMARCA4-206ENST00000538456 MPP1Q00013 466 aa13.1□□□□□ -0.31
SMARCA4-206ENST00000538456 MEF2AQ02078 507 aaPredicted RBP13.1□□□□□ -0.31
SMARCA4-206ENST00000538456 PMPCAQ10713 525 aa13.1□□□□□ -0.31
SMARCA4-206ENST00000538456 HERC3Q15034 1050 aa13.1□□□□□ -0.31
SMARCA4-206ENST00000538456 RPS6KA1Q15418 735 aa13.1□□□□□ -0.31
SMARCA4-206ENST00000538456 CASC4Q6P4E1 433 aa13.1□□□□□ -0.31
SMARCA4-206ENST00000538456 ZNF549Q6P9A3 640 aa13.1□□□□□ -0.31
SMARCA4-206ENST00000538456 GSTA5Q7RTV2 222 aa13.1□□□□□ -0.31
SMARCA4-206ENST00000538456 DENND6AQ8IWF6 608 aa13.1□□□□□ -0.31
SMARCA4-206ENST00000538456 MMP21Q8N119 569 aa13.1□□□□□ -0.31
SMARCA4-206ENST00000538456 ZNF740Q8NDX6 193 aa13.1□□□□□ -0.31
SMARCA4-206ENST00000538456 PTCHD1Q96NR3 888 aa13.1□□□□□ -0.31
SMARCA4-206ENST00000538456 GPR21Q99679 349 aa13.1□□□□□ -0.31
SMARCA4-206ENST00000538456 DEFB126Q9BYW3 111 aa13.1□□□□□ -0.31
SMARCA4-206ENST00000538456 ATG10Q9H0Y0 220 aa13.1□□□□□ -0.31
SMARCA4-206ENST00000538456 TP63Q9H3D4 680 aaPredicted RBP13.1□□□□□ -0.31
SMARCA4-206ENST00000538456 TRIM45Q9H8W5 580 aaPredicted RBP13.1□□□□□ -0.31
SMARCA4-206ENST00000538456 KCNN3Q9UGI6 736 aa13.1□□□□□ -0.31
SMARCA4-206ENST00000538456 FLNAP21333 2647 aaKnown RBP13.09□□□□□ -0.31
SMARCA4-206ENST00000538456 TCRBV7S3A2A0A539 114 aa13.09□□□□□ -0.31
SMARCA4-206ENST00000538456 SAGE2PA6NJ88 616 aa13.09□□□□□ -0.31
SMARCA4-206ENST00000538456 A8MUA0 341 aa13.09□□□□□ -0.31
SMARCA4-206ENST00000538456 CHST10O43529 356 aa13.09□□□□□ -0.31
SMARCA4-206ENST00000538456 GALR3O60755 368 aaPredicted RBP13.09□□□□□ -0.31
SMARCA4-206ENST00000538456 NUP107P57740 925 aa13.09□□□□□ -0.31
SMARCA4-206ENST00000538456 BTG2P78543 158 aa13.09□□□□□ -0.31
SMARCA4-206ENST00000538456 HYAL2Q12891 473 aa13.09□□□□□ -0.31
SMARCA4-206ENST00000538456 CTBP1Q13363 440 aa13.09□□□□□ -0.31
SMARCA4-206ENST00000538456 CES4AQ5XG92 561 aa13.09□□□□□ -0.31
SMARCA4-206ENST00000538456 ARHGAP11AQ6P4F7 1023 aa13.09□□□□□ -0.31
SMARCA4-206ENST00000538456 CYHR1Q6ZMK1 362 aa13.09□□□□□ -0.31
SMARCA4-206ENST00000538456 MDGA2Q7Z553 956 aa13.09□□□□□ -0.31
SMARCA4-206ENST00000538456 CYP4Z2PQ8N1L4 340 aa13.09□□□□□ -0.31
SMARCA4-206ENST00000538456 MFSD9Q8NBP5 474 aa13.09□□□□□ -0.31
SMARCA4-206ENST00000538456 OR52N2Q8NGI0 321 aa13.09□□□□□ -0.31
SMARCA4-206ENST00000538456 OR5M3Q8NGP4 307 aa13.09□□□□□ -0.31
SMARCA4-206ENST00000538456 CD200R1Q8TD46 325 aa13.09□□□□□ -0.31
SMARCA4-206ENST00000538456 KCNJ9Q92806 393 aa13.09□□□□□ -0.31
SMARCA4-206ENST00000538456 TSGA10Q9BZW7 698 aa13.09□□□□□ -0.31
SMARCA4-206ENST00000538456 PCBD2Q9H0N5 130 aa13.09□□□□□ -0.31
SMARCA4-206ENST00000538456 DEFB127Q9H1M4 99 aa13.09□□□□□ -0.31
SMARCA4-206ENST00000538456 CCM2LQ9NUG4 571 aaPredicted RBP13.09□□□□□ -0.31
SMARCA4-206ENST00000538456 ADAMTS6Q9UKP5 1117 aa13.09□□□□□ -0.31
SMARCA4-206ENST00000538456 DNHD1Q96M86 4753 aa13.08□□□□□ -0.32
SMARCA4-206ENST00000538456 TRBV11-1A0A0K0K1C0 115 aa13.08□□□□□ -0.32
SMARCA4-206ENST00000538456 CDK2AP1O14519 115 aa13.08□□□□□ -0.32
SMARCA4-206ENST00000538456 OR1F1O43749 312 aa13.08□□□□□ -0.32
SMARCA4-206ENST00000538456 CEP104O60308 925 aa13.08□□□□□ -0.32
SMARCA4-206ENST00000538456 HOXD4P09016 255 aaPredicted RBP13.08□□□□□ -0.32
SMARCA4-206ENST00000538456 ZNF888P0CJ79 500 aaPredicted RBP13.08□□□□□ -0.32
SMARCA4-206ENST00000538456 ALOX12P18054 663 aa13.08□□□□□ -0.32
SMARCA4-206ENST00000538456 KLK2P20151 261 aa13.08□□□□□ -0.32
SMARCA4-206ENST00000538456 PPP2R2AP63151 447 aa13.08□□□□□ -0.32
SMARCA4-206ENST00000538456 NAE1Q13564 534 aa13.08□□□□□ -0.32
SMARCA4-206ENST00000538456 THOC5Q13769 683 aaKnown RBP13.08□□□□□ -0.32
SMARCA4-206ENST00000538456 DHX34Q14147 1143 aaKnown RBP13.08□□□□□ -0.32
SMARCA4-206ENST00000538456 EMC4Q5J8M3 183 aa13.08□□□□□ -0.32
SMARCA4-206ENST00000538456 AGTRAPQ6RW13 159 aa13.08□□□□□ -0.32
SMARCA4-206ENST00000538456 TGIF2LYQ8IUE0 185 aa13.08□□□□□ -0.32
SMARCA4-206ENST00000538456 AFAP1L2Q8N4X5 818 aa13.08□□□□□ -0.32
SMARCA4-206ENST00000538456 TMEM156Q8N614 296 aa13.08□□□□□ -0.32
SMARCA4-206ENST00000538456 CHDHQ8NE62 594 aaPredicted RBP13.08□□□□□ -0.32
SMARCA4-206ENST00000538456 C16orf52Q8NHV5 167 aa13.08□□□□□ -0.32
SMARCA4-206ENST00000538456 ZNF669Q96BR6 464 aaPredicted RBP13.08□□□□□ -0.32
SMARCA4-206ENST00000538456 FAM129AQ9BZQ8 928 aa13.08□□□□□ -0.32
SMARCA4-206ENST00000538456 RHBGQ9H310 441 aa13.08□□□□□ -0.32
SMARCA4-206ENST00000538456 KLHL42Q9P2K6 505 aa13.08□□□□□ -0.32
SMARCA4-206ENST00000538456 PDE10AQ9Y233 779 aa13.08□□□□□ -0.32
SMARCA4-206ENST00000538456 DHRS7Q9Y394 339 aa13.08□□□□□ -0.32
SMARCA4-206ENST00000538456 FAM166BA8MTA8 275 aa13.07□□□□□ -0.32
SMARCA4-206ENST00000538456 TPSB2P20231 275 aa13.07□□□□□ -0.32
SMARCA4-206ENST00000538456 SLC1A2P43004 574 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms