RNA–Protein interactions for RNA: ENST00000537002.5

PTPRD-213, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 8,224 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-213ENST00000537002 RPS14P62263 151 aaKnown RBP5.22□□□□□ -1.57
PTPRD-213ENST00000537002 MTAPQ13126 283 aa5.22□□□□□ -1.57
PTPRD-213ENST00000537002 FAM151BQ6UXP7 276 aa5.22□□□□□ -1.57
PTPRD-213ENST00000537002 FAM83AQ86UY5 434 aa5.22□□□□□ -1.57
PTPRD-213ENST00000537002 KIAA0319LQ8IZA0 1049 aa5.22□□□□□ -1.57
PTPRD-213ENST00000537002 RNASE11Q8TAA1 199 aaKnown RBP5.22□□□□□ -1.57
PTPRD-213ENST00000537002 CEP76Q8TAP6 659 aa5.22□□□□□ -1.57
PTPRD-213ENST00000537002 USP7Q93009 1102 aa5.22□□□□□ -1.57
PTPRD-213ENST00000537002 DUSP16Q9BY84 665 aa5.22□□□□□ -1.57
PTPRD-213ENST00000537002 TNKS2Q9H2K2 1166 aa5.22□□□□□ -1.57
PTPRD-213ENST00000537002 IMP3Q9NV31 184 aaKnown RBP5.22□□□□□ -1.57
PTPRD-213ENST00000537002 MTMR10Q9NXD2 777 aa5.22□□□□□ -1.57
PTPRD-213ENST00000537002 TARM1B6A8C7 271 aa5.22□□□□□ -1.57
PTPRD-213ENST00000537002 B3GALNT1O75752 331 aa5.22□□□□□ -1.57
PTPRD-213ENST00000537002 CA5AP35218 305 aa5.22□□□□□ -1.57
PTPRD-213ENST00000537002 KCNC1P48547 511 aa5.22□□□□□ -1.57
PTPRD-213ENST00000537002 PPP3R1P63098 170 aa5.22□□□□□ -1.57
PTPRD-213ENST00000537002 BTN1A1Q13410 526 aa5.22□□□□□ -1.57
PTPRD-213ENST00000537002 KCNC3Q14003 757 aa5.22□□□□□ -1.57
PTPRD-213ENST00000537002 ZNF234Q14588 700 aa5.22□□□□□ -1.57
PTPRD-213ENST00000537002 CDKL4Q5MAI5 379 aa5.22□□□□□ -1.57
PTPRD-213ENST00000537002 ADNP2Q6IQ32 1131 aa5.22□□□□□ -1.57
PTPRD-213ENST00000537002 CTU1Q7Z7A3 348 aaKnown RBP5.22□□□□□ -1.57
PTPRD-213ENST00000537002 SYNPOQ8N3V7 929 aa5.22□□□□□ -1.57
PTPRD-213ENST00000537002 FAM98AQ8NCA5 519 aaKnown RBP5.22□□□□□ -1.57
PTPRD-213ENST00000537002 PPP1R13LQ8WUF5 828 aa5.22□□□□□ -1.57
PTPRD-213ENST00000537002 NTAN1Q96AB6 310 aa5.22□□□□□ -1.57
PTPRD-213ENST00000537002 RAD51AP1Q96B01 352 aa5.22□□□□□ -1.57
PTPRD-213ENST00000537002 DCLRE1CQ96SD1 692 aaKnown RBP5.22□□□□□ -1.57
PTPRD-213ENST00000537002 LDAHQ9H6V9 325 aa5.22□□□□□ -1.57
PTPRD-213ENST00000537002 RC3H2Q9HBD1 1191 aaKnown RBP5.22□□□□□ -1.57
PTPRD-213ENST00000537002 RANGRFQ9HD47 186 aaPredicted RBP5.22□□□□□ -1.57
PTPRD-213ENST00000537002 FAM198AQ9UFP1 575 aa5.22□□□□□ -1.57
PTPRD-213ENST00000537002 IRAK3Q9Y616 596 aa5.22□□□□□ -1.57
PTPRD-213ENST00000537002 ENPP3O14638 875 aa5.22□□□□□ -1.57
PTPRD-213ENST00000537002 RP2O75695 350 aa5.22□□□□□ -1.57
PTPRD-213ENST00000537002 FHP07954 510 aa5.22□□□□□ -1.57
PTPRD-213ENST00000537002 PKMP14618 531 aaKnown RBP5.22□□□□□ -1.57
PTPRD-213ENST00000537002 DNASE1P24855 282 aa5.22□□□□□ -1.57
PTPRD-213ENST00000537002 HOXA1P49639 335 aaPredicted RBP5.22□□□□□ -1.57
PTPRD-213ENST00000537002 NKX3-2P78367 333 aa5.22□□□□□ -1.57
PTPRD-213ENST00000537002 PITPNAQ00169 270 aa5.22□□□□□ -1.57
PTPRD-213ENST00000537002 DBPQ10586 325 aaPredicted RBP5.22□□□□□ -1.57
PTPRD-213ENST00000537002 FGFBP1Q14512 234 aa5.22□□□□□ -1.57
PTPRD-213ENST00000537002 KIAA1161Q6NSJ0 714 aa5.22□□□□□ -1.57
PTPRD-213ENST00000537002 BRAT1Q6PJG6 821 aa5.22□□□□□ -1.57
PTPRD-213ENST00000537002 LRRN1Q6UXK5 716 aa5.22□□□□□ -1.57
PTPRD-213ENST00000537002 Q8N402 240 aa5.22□□□□□ -1.57
PTPRD-213ENST00000537002 SAMD11Q96NU1 681 aa5.22□□□□□ -1.57
PTPRD-213ENST00000537002 FAM129BQ96TA1 746 aa5.22□□□□□ -1.57
PTPRD-213ENST00000537002 GSX2Q9BZM3 304 aa5.22□□□□□ -1.57
PTPRD-213ENST00000537002 NANSQ9NR45 359 aa5.22□□□□□ -1.57
PTPRD-213ENST00000537002 FAM105AQ9NUU6 356 aa5.22□□□□□ -1.57
PTPRD-213ENST00000537002 DNAJC27Q9NZQ0 273 aa5.22□□□□□ -1.57
PTPRD-213ENST00000537002 LSM7Q9UK45 103 aaKnown RBP5.22□□□□□ -1.57
PTPRD-213ENST00000537002 ZCWPW2A0A1B0GU75 182 aa5.22□□□□□ -1.57
PTPRD-213ENST00000537002 ADM5C9JUS6 153 aa5.22□□□□□ -1.57
PTPRD-213ENST00000537002 EEF1E1O43324 174 aaKnown RBP5.22□□□□□ -1.57
PTPRD-213ENST00000537002 C1RP00736 705 aa5.22□□□□□ -1.57
PTPRD-213ENST00000537002 S100A8P05109 93 aa5.22□□□□□ -1.57
PTPRD-213ENST00000537002 STSP08842 583 aa5.22□□□□□ -1.57
PTPRD-213ENST00000537002 ENPP1P22413 925 aa5.22□□□□□ -1.57
PTPRD-213ENST00000537002 ARRB2P32121 409 aa5.22□□□□□ -1.57
PTPRD-213ENST00000537002 TPMTP51580 245 aa5.22□□□□□ -1.57
PTPRD-213ENST00000537002 TAS2R41P59536 307 aa5.22□□□□□ -1.57
PTPRD-213ENST00000537002 PAFAH1B3Q15102 231 aaKnown RBP5.22□□□□□ -1.57
PTPRD-213ENST00000537002 SLC14A2Q15849 920 aa5.22□□□□□ -1.57
PTPRD-213ENST00000537002 BAK1Q16611 211 aa5.22□□□□□ -1.57
PTPRD-213ENST00000537002 ZNF678Q5SXM1 525 aa5.22□□□□□ -1.57
PTPRD-213ENST00000537002 RNF44Q7L0R7 432 aa5.22□□□□□ -1.57
PTPRD-213ENST00000537002 SIAH1Q8IUQ4 282 aa5.22□□□□□ -1.57
PTPRD-213ENST00000537002 CFAP206Q8IYR0 622 aa5.22□□□□□ -1.57
PTPRD-213ENST00000537002 ZNF615Q8N8J6 731 aa5.22□□□□□ -1.57
PTPRD-213ENST00000537002 C1orf127Q8N9H9 656 aa5.22□□□□□ -1.57
PTPRD-213ENST00000537002 C11orf65Q8NCR3 313 aa5.22□□□□□ -1.57
PTPRD-213ENST00000537002 REPS2Q8NFH8 660 aa5.22□□□□□ -1.57
PTPRD-213ENST00000537002 OR4K2Q8NGD2 314 aa5.22□□□□□ -1.57
PTPRD-213ENST00000537002 NPLOC4Q8TAT6 608 aa5.22□□□□□ -1.57
PTPRD-213ENST00000537002 OPALINQ96PE5 141 aa5.22□□□□□ -1.57
PTPRD-213ENST00000537002 XKR8Q9H6D3 395 aa5.22□□□□□ -1.57
PTPRD-213ENST00000537002 AIG1Q9NVV5 245 aa5.22□□□□□ -1.57
PTPRD-213ENST00000537002 AHSPQ9NZD4 102 aa5.22□□□□□ -1.57
PTPRD-213ENST00000537002 RHCGQ9UBD6 479 aa5.22□□□□□ -1.57
PTPRD-213ENST00000537002 USP22Q9UPT9 525 aa5.22□□□□□ -1.57
PTPRD-213ENST00000537002 MROH6A6NGR9 719 aa5.22□□□□□ -1.57
PTPRD-213ENST00000537002 IQCF5A8MTL0 148 aa5.22□□□□□ -1.57
PTPRD-213ENST00000537002 SSTR2P30874 369 aa5.22□□□□□ -1.57
PTPRD-213ENST00000537002 SHMT2P34897 504 aa5.22□□□□□ -1.57
PTPRD-213ENST00000537002 CSRP3P50461 194 aa5.22□□□□□ -1.57
PTPRD-213ENST00000537002 TECRLQ5HYJ1 363 aa5.22□□□□□ -1.57
PTPRD-213ENST00000537002 MEDAGQ5VYS4 303 aa5.22□□□□□ -1.57
PTPRD-213ENST00000537002 OR4F3Q6IEY1 312 aa5.22□□□□□ -1.57
PTPRD-213ENST00000537002 TRMT11Q7Z4G4 463 aaKnown RBP5.22□□□□□ -1.57
PTPRD-213ENST00000537002 HS3ST5Q8IZT8 346 aa5.22□□□□□ -1.57
PTPRD-213ENST00000537002 ARRDC4Q8NCT1 418 aa5.22□□□□□ -1.57
PTPRD-213ENST00000537002 ARNTL2Q8WYA1 636 aa5.22□□□□□ -1.57
PTPRD-213ENST00000537002 HGDQ93099 445 aa5.22□□□□□ -1.57
PTPRD-213ENST00000537002 SPNS1Q9H2V7 528 aa5.22□□□□□ -1.57
PTPRD-213ENST00000537002 TFB2MQ9H5Q4 396 aaKnown RBP5.22□□□□□ -1.57
PTPRD-213ENST00000537002 ERVMER34-1Q9H9K5 563 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms