RNA–Protein interactions for RNA: ENST00000536710.1

PRKDC-208, Transcript of protein kinase, DNA-activated, catalytic subunit, human

TSL 4

Gene PRKDC, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKDC-208	ENST00000536710	LRRC37A5P	Q49AS3	106 aa		4.76	□□□□□ -1.65
PRKDC-208	ENST00000536710	FAM53A	Q6NSI3	398 aa	Predicted RBP	4.76	□□□□□ -1.65
PRKDC-208	ENST00000536710	SLC27A4	Q6P1M0	643 aa		4.76	□□□□□ -1.65
PRKDC-208	ENST00000536710	LEKR1	Q6ZMV7	388 aa		4.76	□□□□□ -1.65
PRKDC-208	ENST00000536710	TRMT11	Q7Z4G4	463 aa	Known RBP	4.76	□□□□□ -1.65
PRKDC-208	ENST00000536710	PTAR1	Q7Z6K3	402 aa	Predicted RBP	4.76	□□□□□ -1.65
PRKDC-208	ENST00000536710	ZNF410	Q86VK4	478 aa		4.76	□□□□□ -1.65
PRKDC-208	ENST00000536710	ZSCAN30	Q86W11	494 aa		4.76	□□□□□ -1.65
PRKDC-208	ENST00000536710	HOGA1	Q86XE5	327 aa		4.76	□□□□□ -1.65
PRKDC-208	ENST00000536710	ZC3H3	Q8IXZ2	948 aa	Known RBP	4.76	□□□□□ -1.65
PRKDC-208	ENST00000536710	RNF149	Q8NC42	400 aa		4.76	□□□□□ -1.65
PRKDC-208	ENST00000536710	OR5AP2	Q8NGF4	316 aa		4.76	□□□□□ -1.65
PRKDC-208	ENST00000536710	SAP25	Q8TEE9	199 aa		4.76	□□□□□ -1.65
PRKDC-208	ENST00000536710	SMAP2	Q8WU79	429 aa	Predicted RBP	4.76	□□□□□ -1.65
PRKDC-208	ENST00000536710	WBP2	Q969T9	261 aa		4.76	□□□□□ -1.65
PRKDC-208	ENST00000536710	EEF2KMT	Q96G04	330 aa		4.76	□□□□□ -1.65
PRKDC-208	ENST00000536710	MAGED4	Q96JG8	741 aa		4.76	□□□□□ -1.65
PRKDC-208	ENST00000536710	ZNF560	Q96MR9	790 aa		4.76	□□□□□ -1.65
PRKDC-208	ENST00000536710	FUCA2	Q9BTY2	467 aa		4.76	□□□□□ -1.65
PRKDC-208	ENST00000536710	ABCG8	Q9H221	673 aa		4.76	□□□□□ -1.65
PRKDC-208	ENST00000536710	MAGEF1	Q9HAY2	307 aa		4.76	□□□□□ -1.65
PRKDC-208	ENST00000536710	C3orf14	Q9HBI5	128 aa		4.76	□□□□□ -1.65
PRKDC-208	ENST00000536710	ZCCHC3	Q9NUD5	404 aa	Known RBP	4.76	□□□□□ -1.65
PRKDC-208	ENST00000536710	KCNK6	Q9Y257	313 aa		4.76	□□□□□ -1.65
PRKDC-208	ENST00000536710	TMEM129	A0AVI4	362 aa		4.75	□□□□□ -1.65
PRKDC-208	ENST00000536710	MSGN1	A6NI15	193 aa		4.75	□□□□□ -1.65
PRKDC-208	ENST00000536710	ZNF732	B4DXR9	585 aa		4.75	□□□□□ -1.65
PRKDC-208	ENST00000536710	HHLA1	C9JL84	531 aa		4.75	□□□□□ -1.65
PRKDC-208	ENST00000536710	RTCA	O00442	366 aa	Known RBP	4.75	□□□□□ -1.65
PRKDC-208	ENST00000536710	HSF2BP	O75031	334 aa		4.75	□□□□□ -1.65
PRKDC-208	ENST00000536710	ATP6V1G1	O75348	118 aa		4.75	□□□□□ -1.65
PRKDC-208	ENST00000536710	SAP30	O75446	220 aa		4.75	□□□□□ -1.65
PRKDC-208	ENST00000536710	CLN5	O75503	358 aa		4.75	□□□□□ -1.65
PRKDC-208	ENST00000536710	PAK4	O96013	591 aa	Predicted RBP	4.75	□□□□□ -1.65
PRKDC-208	ENST00000536710	CEACAM1	P13688	526 aa		4.75	□□□□□ -1.65
PRKDC-208	ENST00000536710	CTNNA2	P26232	953 aa		4.75	□□□□□ -1.65
PRKDC-208	ENST00000536710	OR3A2	P47893	321 aa		4.75	□□□□□ -1.65
PRKDC-208	ENST00000536710	XG	P55808	180 aa		4.75	□□□□□ -1.65
PRKDC-208	ENST00000536710	OR1D5	P58170	312 aa		4.75	□□□□□ -1.65
PRKDC-208	ENST00000536710	SNRPD1	P62314	119 aa	Known RBP	4.75	□□□□□ -1.65
PRKDC-208	ENST00000536710	PSRC1	Q6PGN9	363 aa	Predicted RBP	4.75	□□□□□ -1.65
PRKDC-208	ENST00000536710	C15orf52	Q6ZUT6	534 aa	Known RBP	4.75	□□□□□ -1.65
PRKDC-208	ENST00000536710	RABEPK	Q7Z6M1	372 aa		4.75	□□□□□ -1.65
PRKDC-208	ENST00000536710	APLF	Q8IW19	511 aa	Predicted RBP	4.75	□□□□□ -1.65
PRKDC-208	ENST00000536710	ZNF444	Q8N0Y2	327 aa	Predicted RBP	4.75	□□□□□ -1.65
PRKDC-208	ENST00000536710	LSMEM2	Q8N112	164 aa		4.75	□□□□□ -1.65
PRKDC-208	ENST00000536710	CCDC185	Q8N715	623 aa		4.75	□□□□□ -1.65
PRKDC-208	ENST00000536710	TMEM99	Q8N816	258 aa		4.75	□□□□□ -1.65
PRKDC-208	ENST00000536710	OR10G8	Q8NGN5	311 aa		4.75	□□□□□ -1.65
PRKDC-208	ENST00000536710	OR6S1	Q8NH40	331 aa		4.75	□□□□□ -1.65
PRKDC-208	ENST00000536710	ZNF486	Q96H40	463 aa	Predicted RBP	4.75	□□□□□ -1.65
PRKDC-208	ENST00000536710	SPATA13	Q96N96	652 aa		4.75	□□□□□ -1.65
PRKDC-208	ENST00000536710	TMEM237	Q96Q45	408 aa		4.75	□□□□□ -1.65
PRKDC-208	ENST00000536710	IL12RB2	Q99665	862 aa		4.75	□□□□□ -1.65
PRKDC-208	ENST00000536710	TDRD1	Q9BXT4	1180 aa	Known RBP	4.75	□□□□□ -1.65
PRKDC-208	ENST00000536710	LRRC2	Q9BYS8	371 aa		4.75	□□□□□ -1.65
PRKDC-208	ENST00000536710	STAU2	Q9NUL3	570 aa	Known RBP eCLIP	4.75	□□□□□ -1.65
PRKDC-208	ENST00000536710	HMG20B	Q9P0W2	317 aa		4.75	□□□□□ -1.65
PRKDC-208	ENST00000536710	DBF4	Q9UBU7	674 aa	Predicted RBP	4.75	□□□□□ -1.65
PRKDC-208	ENST00000536710	ODF2L	Q9ULJ1	636 aa		4.75	□□□□□ -1.65
PRKDC-208	ENST00000536710	PLCL2	Q9UPR0	1127 aa		4.75	□□□□□ -1.65
PRKDC-208	ENST00000536710	GREB1L	Q9C091	1923 aa	Predicted RBP	4.75	□□□□□ -1.65
PRKDC-208	ENST00000536710		A0A087WW49	117 aa		4.74	□□□□□ -1.65
PRKDC-208	ENST00000536710	BICDL2	A1A5D9	508 aa		4.74	□□□□□ -1.65
PRKDC-208	ENST00000536710	ERVV-2	B6SEH9	535 aa		4.74	□□□□□ -1.65
PRKDC-208	ENST00000536710	SLC1A7	O00341	560 aa		4.74	□□□□□ -1.65
PRKDC-208	ENST00000536710	CHUK	O15111	745 aa		4.74	□□□□□ -1.65
PRKDC-208	ENST00000536710	MLNR	O43193	412 aa		4.74	□□□□□ -1.65
PRKDC-208	ENST00000536710	PSMD3	O43242	534 aa		4.74	□□□□□ -1.65
PRKDC-208	ENST00000536710	MAGEC1	O60732	1142 aa		4.74	□□□□□ -1.65
PRKDC-208	ENST00000536710	PRDM1	O75626	825 aa		4.74	□□□□□ -1.65
PRKDC-208	ENST00000536710	CHRNG	P07510	517 aa		4.74	□□□□□ -1.65
PRKDC-208	ENST00000536710	ABHD2	P08910	425 aa		4.74	□□□□□ -1.65
PRKDC-208	ENST00000536710	NUDT17	P0C025	328 aa		4.74	□□□□□ -1.65
PRKDC-208	ENST00000536710	PATE4	P0C8F1	98 aa		4.74	□□□□□ -1.65
PRKDC-208	ENST00000536710	KRT3	P12035	628 aa		4.74	□□□□□ -1.65
PRKDC-208	ENST00000536710	UGT1A6	P19224	532 aa		4.74	□□□□□ -1.65
PRKDC-208	ENST00000536710	CDKN1A	P38936	164 aa		4.74	□□□□□ -1.65
PRKDC-208	ENST00000536710	PAX9	P55771	341 aa		4.74	□□□□□ -1.65
PRKDC-208	ENST00000536710	WASHC5	Q12768	1159 aa		4.74	□□□□□ -1.65
PRKDC-208	ENST00000536710	PDE7A	Q13946	482 aa		4.74	□□□□□ -1.65
PRKDC-208	ENST00000536710	CEACAM7	Q14002	265 aa		4.74	□□□□□ -1.65
PRKDC-208	ENST00000536710	ZNF876P	Q49A33	203 aa		4.74	□□□□□ -1.65
PRKDC-208	ENST00000536710	ATP1A1-AS1	Q5TC04	95 aa		4.74	□□□□□ -1.65
PRKDC-208	ENST00000536710	CNST	Q6PJW8	725 aa		4.74	□□□□□ -1.65
PRKDC-208	ENST00000536710	TRIM58	Q8NG06	486 aa		4.74	□□□□□ -1.65
PRKDC-208	ENST00000536710	SPATA18	Q8TC71	538 aa		4.74	□□□□□ -1.65
PRKDC-208	ENST00000536710	AZIN2	Q96A70	460 aa		4.74	□□□□□ -1.65
PRKDC-208	ENST00000536710	BPIFA2	Q96DR5	249 aa		4.74	□□□□□ -1.65
PRKDC-208	ENST00000536710	FBXO17	Q96EF6	278 aa		4.74	□□□□□ -1.65
PRKDC-208	ENST00000536710	C2orf48	Q96LS8	159 aa		4.74	□□□□□ -1.65
PRKDC-208	ENST00000536710	F2RL3	Q96RI0	385 aa		4.74	□□□□□ -1.65
PRKDC-208	ENST00000536710	RUFY1	Q96T51	708 aa		4.74	□□□□□ -1.65
PRKDC-208	ENST00000536710	NAP1L3	Q99457	506 aa	Predicted RBP	4.74	□□□□□ -1.65
PRKDC-208	ENST00000536710	FAM213A	Q9BRX8	229 aa		4.74	□□□□□ -1.65
PRKDC-208	ENST00000536710	ABCG4	Q9H172	646 aa		4.74	□□□□□ -1.65
PRKDC-208	ENST00000536710	TNMD	Q9H2S6	317 aa		4.74	□□□□□ -1.65
PRKDC-208	ENST00000536710	ANO10	Q9NW15	660 aa		4.74	□□□□□ -1.65
PRKDC-208	ENST00000536710	IL19	Q9UHD0	177 aa		4.74	□□□□□ -1.65
PRKDC-208	ENST00000536710	ANGPTL3	Q9Y5C1	460 aa		4.74	□□□□□ -1.65

Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms