RNA–Protein interactions for RNA: ENST00000536404.6

CHRNB1-202, Transcript of cholinergic receptor nicotinic beta 1 subunit, humanhuman

TSL 2 BASIC

Gene CHRNB1, Length 1,623 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1-202ENST00000536404 PTGDR2Q9Y5Y4 395 aa11.21□□□□□ -0.61
CHRNB1-202ENST00000536404 CABIN1Q9Y6J0 2220 aa11.21□□□□□ -0.62
CHRNB1-202ENST00000536404 LOC100130705A0A1B0GUX0 176 aa11.2□□□□□ -0.62
CHRNB1-202ENST00000536404 UBA6A0AVT1 1052 aaPredicted RBP11.2□□□□□ -0.62
CHRNB1-202ENST00000536404 SAGE2PA6NJ88 616 aa11.2□□□□□ -0.62
CHRNB1-202ENST00000536404 C2orf81A6NN90 581 aa11.2□□□□□ -0.62
CHRNB1-202ENST00000536404 SLC28A1O00337 649 aa11.2□□□□□ -0.62
CHRNB1-202ENST00000536404 BTN3A1O00481 513 aa11.2□□□□□ -0.62
CHRNB1-202ENST00000536404 SNPHO15079 494 aa11.2□□□□□ -0.62
CHRNB1-202ENST00000536404 ZW10O43264 779 aa11.2□□□□□ -0.62
CHRNB1-202ENST00000536404 RGS14O43566 566 aa11.2□□□□□ -0.62
CHRNB1-202ENST00000536404 IL6P05231 212 aa11.2□□□□□ -0.62
CHRNB1-202ENST00000536404 HOXB1P14653 301 aaPredicted RBP11.2□□□□□ -0.62
CHRNB1-202ENST00000536404 IL12AP29459 219 aa11.2□□□□□ -0.62
CHRNB1-202ENST00000536404 OPRL1P41146 370 aa11.2□□□□□ -0.62
CHRNB1-202ENST00000536404 ARHGDIAP52565 204 aa11.2□□□□□ -0.62
CHRNB1-202ENST00000536404 MAXP61244 160 aa11.2□□□□□ -0.62
CHRNB1-202ENST00000536404 ST8SIA6P61647 398 aa11.2□□□□□ -0.62
CHRNB1-202ENST00000536404 CSNK2BP67870 215 aa11.2□□□□□ -0.62
CHRNB1-202ENST00000536404 TIAL1Q01085 375 aaKnown RBP eCLIP11.2□□□□□ -0.62
CHRNB1-202ENST00000536404 RIPPLY1Q0D2K3 151 aa11.2□□□□□ -0.62
CHRNB1-202ENST00000536404 POLD3Q15054 466 aaPredicted RBP11.2□□□□□ -0.62
CHRNB1-202ENST00000536404 TAF1AQ15573 450 aaPredicted RBP11.2□□□□□ -0.62
CHRNB1-202ENST00000536404 TSNQ15631 228 aaKnown RBP11.2□□□□□ -0.62
CHRNB1-202ENST00000536404 TRIP6Q15654 476 aaKnown RBP11.2□□□□□ -0.62
CHRNB1-202ENST00000536404 HLA-BQ31612 363 aa11.2□□□□□ -0.62
CHRNB1-202ENST00000536404 ZNF776Q68DI1 518 aaPredicted RBP11.2□□□□□ -0.62
CHRNB1-202ENST00000536404 DLEU7Q6UYE1 221 aa11.2□□□□□ -0.62
CHRNB1-202ENST00000536404 ADCK1Q86TW2 530 aa11.2□□□□□ -0.62
CHRNB1-202ENST00000536404 CIR1Q86X95 450 aaPredicted RBP11.2□□□□□ -0.62
CHRNB1-202ENST00000536404 NAXDQ8IW45 347 aa11.2□□□□□ -0.62
CHRNB1-202ENST00000536404 APCDD1Q8J025 514 aa11.2□□□□□ -0.62
CHRNB1-202ENST00000536404 STK40Q8N2I9 435 aa11.2□□□□□ -0.62
CHRNB1-202ENST00000536404 ZCCHC7Q8N3Z6 543 aaKnown RBP11.2□□□□□ -0.62
CHRNB1-202ENST00000536404 DTWD1Q8N5C7 304 aa11.2□□□□□ -0.62
CHRNB1-202ENST00000536404 GANCQ8TET4 914 aa11.2□□□□□ -0.62
CHRNB1-202ENST00000536404 PHF10Q8WUB8 498 aaKnown RBP11.2□□□□□ -0.62
CHRNB1-202ENST00000536404 FAM162AQ96A26 154 aa11.2□□□□□ -0.62
CHRNB1-202ENST00000536404 SEMA3CQ99985 751 aa11.2□□□□□ -0.62
CHRNB1-202ENST00000536404 PCED1AQ9H1Q7 454 aa11.2□□□□□ -0.62
CHRNB1-202ENST00000536404 RSPH9Q9H1X1 276 aaPredicted RBP11.2□□□□□ -0.62
CHRNB1-202ENST00000536404 TRIT1Q9H3H1 467 aaKnown RBP11.2□□□□□ -0.62
CHRNB1-202ENST00000536404 GAREM1Q9H706 876 aa11.2□□□□□ -0.62
CHRNB1-202ENST00000536404 ACTR8Q9H981 624 aa11.2□□□□□ -0.62
CHRNB1-202ENST00000536404 FBRSQ9HAH7 460 aa11.2□□□□□ -0.62
CHRNB1-202ENST00000536404 INTS7Q9NVH2 962 aaKnown RBP11.2□□□□□ -0.62
CHRNB1-202ENST00000536404 CD274Q9NZQ7 290 aa11.2□□□□□ -0.62
CHRNB1-202ENST00000536404 SLCO3A1Q9UIG8 710 aa11.2□□□□□ -0.62
CHRNB1-202ENST00000536404 ZMIZ1Q9ULJ6 1067 aa11.2□□□□□ -0.62
CHRNB1-202ENST00000536404 FNDC3AQ9Y2H6 1198 aaKnown RBP11.2□□□□□ -0.62
CHRNB1-202ENST00000536404 CAB39Q9Y376 341 aaPredicted RBP11.2□□□□□ -0.62
CHRNB1-202ENST00000536404 ARPC4-TTLL3A0A0A6YYG9 625 aa11.2□□□□□ -0.62
CHRNB1-202ENST00000536404 ELOVL7A1L3X0 281 aa11.2□□□□□ -0.62
CHRNB1-202ENST00000536404 OR51F1A6NGY5 319 aa11.2□□□□□ -0.62
CHRNB1-202ENST00000536404 DRGXA6NNA5 263 aa11.2□□□□□ -0.62
CHRNB1-202ENST00000536404 C9JVG2 144 aa11.2□□□□□ -0.62
CHRNB1-202ENST00000536404 H0Y626 953 aa11.2□□□□□ -0.62
CHRNB1-202ENST00000536404 J3KR12 359 aa11.2□□□□□ -0.62
CHRNB1-202ENST00000536404 SLC1A7O00341 560 aa11.2□□□□□ -0.62
CHRNB1-202ENST00000536404 CCRL2O00421 344 aa11.2□□□□□ -0.62
CHRNB1-202ENST00000536404 PPP6CO00743 305 aa11.2□□□□□ -0.62
CHRNB1-202ENST00000536404 SEMA4FO95754 770 aa11.2□□□□□ -0.62
CHRNB1-202ENST00000536404 OTCP00480 354 aa11.2□□□□□ -0.62
CHRNB1-202ENST00000536404 PKMP14618 531 aaKnown RBP11.2□□□□□ -0.62
CHRNB1-202ENST00000536404 FMO4P31512 558 aa11.2□□□□□ -0.62
CHRNB1-202ENST00000536404 SERINC3Q13530 473 aa11.2□□□□□ -0.62
CHRNB1-202ENST00000536404 CDH18Q13634 790 aa11.2□□□□□ -0.62
CHRNB1-202ENST00000536404 PCBP2Q15366 365 aaKnown RBP eCLIP11.2□□□□□ -0.625e-11■■■■■ 34.3
CHRNB1-202ENST00000536404 HNRNPA1L2Q32P51 320 aaKnown RBP11.2□□□□□ -0.62
CHRNB1-202ENST00000536404 ARTNQ5T4W7 220 aa11.2□□□□□ -0.62
CHRNB1-202ENST00000536404 C9orf64Q5T6V5 341 aa11.2□□□□□ -0.62
CHRNB1-202ENST00000536404 CACHD1Q5VU97 1274 aa11.2□□□□□ -0.62
CHRNB1-202ENST00000536404 ZNF691Q5VV52 312 aa11.2□□□□□ -0.62
CHRNB1-202ENST00000536404 ATG9BQ674R7 924 aa11.2□□□□□ -0.62
CHRNB1-202ENST00000536404 ALG1LQ6GMV1 187 aa11.2□□□□□ -0.62
CHRNB1-202ENST00000536404 METTL2BQ6P1Q9 378 aaKnown RBP11.2□□□□□ -0.62
CHRNB1-202ENST00000536404 CYP20A1Q6UW02 462 aa11.2□□□□□ -0.62
CHRNB1-202ENST00000536404 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.2□□□□□ -0.62
CHRNB1-202ENST00000536404 PRSS48Q7RTY5 328 aa11.2□□□□□ -0.62
CHRNB1-202ENST00000536404 SLCO6A1Q86UG4 719 aa11.2□□□□□ -0.62
CHRNB1-202ENST00000536404 ZNF683Q8IZ20 524 aa11.2□□□□□ -0.62
CHRNB1-202ENST00000536404 FAM109AQ8N4B1 249 aa11.2□□□□□ -0.62
CHRNB1-202ENST00000536404 PNPLA1Q8N8W4 532 aa11.2□□□□□ -0.62
CHRNB1-202ENST00000536404 ZNF557Q8N988 423 aaPredicted RBP11.2□□□□□ -0.62
CHRNB1-202ENST00000536404 ANKRD53Q8N9V6 530 aa11.2□□□□□ -0.62
CHRNB1-202ENST00000536404 KDF1Q8NAX2 398 aaPredicted RBP11.2□□□□□ -0.62
CHRNB1-202ENST00000536404 GALNT11Q8NCW6 608 aa11.2□□□□□ -0.62
CHRNB1-202ENST00000536404 SLC13A3Q8WWT9 602 aa11.2□□□□□ -0.62
CHRNB1-202ENST00000536404 RPL10LQ96L21 214 aaKnown RBP11.2□□□□□ -0.62
CHRNB1-202ENST00000536404 BTBD1Q9H0C5 482 aa11.2□□□□□ -0.62
CHRNB1-202ENST00000536404 TM9SF3Q9HD45 589 aa11.2□□□□□ -0.62
CHRNB1-202ENST00000536404 ATP13A2Q9NQ11 1180 aa11.2□□□□□ -0.62
CHRNB1-202ENST00000536404 GIMAP4Q9NUV9 329 aa11.2□□□□□ -0.62
CHRNB1-202ENST00000536404 SERGEFQ9UGK8 458 aa11.2□□□□□ -0.62
CHRNB1-202ENST00000536404 ADGRE2Q9UHX3 823 aa11.2□□□□□ -0.62
CHRNB1-202ENST00000536404 ZNF229Q9UJW7 825 aa11.2□□□□□ -0.62
CHRNB1-202ENST00000536404 ZNF221Q9UK13 617 aa11.2□□□□□ -0.62
CHRNB1-202ENST00000536404 ZBTB32Q9Y2Y4 487 aaPredicted RBP11.2□□□□□ -0.62
CHRNB1-202ENST00000536404 NEUROG3Q9Y4Z2 214 aa11.2□□□□□ -0.62
CHRNB1-202ENST00000536404 PCDHB9Q9Y5E1 797 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms