RNA–Protein interactions for RNA: ENST00000535897.1

CHFR-211, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 4

Gene CHFR, Length 587 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-211ENST00000535897 REXO2Q9Y3B8 237 aaKnown RBP7.53□□□□□ -1.2
CHFR-211ENST00000535897 FBN3Q75N90 2809 aa7.53□□□□□ -1.2
CHFR-211ENST00000535897 ABCA4P78363 2273 aa7.53□□□□□ -1.2
CHFR-211ENST00000535897 HRNRQ86YZ3 2850 aaPredicted RBP7.52□□□□□ -1.21
CHFR-211ENST00000535897 TRBV11-1A0A0K0K1C0 115 aa7.52□□□□□ -1.21
CHFR-211ENST00000535897 FAM237BA0A1B0GVD1 139 aa7.52□□□□□ -1.21
CHFR-211ENST00000535897 PABPN1LA6NDY0 278 aaKnown RBP7.52□□□□□ -1.21
CHFR-211ENST00000535897 A8MUA0 341 aa7.52□□□□□ -1.21
CHFR-211ENST00000535897 ACOT7O00154 380 aa7.52□□□□□ -1.21
CHFR-211ENST00000535897 PSMD12O00232 456 aaPredicted RBP7.52□□□□□ -1.21
CHFR-211ENST00000535897 CDK2AP1O14519 115 aa7.52□□□□□ -1.21
CHFR-211ENST00000535897 CHST10O43529 356 aa7.52□□□□□ -1.21
CHFR-211ENST00000535897 F7P08709 466 aaPredicted RBP7.52□□□□□ -1.21
CHFR-211ENST00000535897 HOXD4P09016 255 aaPredicted RBP7.52□□□□□ -1.21
CHFR-211ENST00000535897 MPC1LP0DKB6 136 aa7.52□□□□□ -1.21
CHFR-211ENST00000535897 CDH1P12830 882 aa7.52□□□□□ -1.21
CHFR-211ENST00000535897 ENO3P13929 434 aaPredicted RBP7.52□□□□□ -1.21
CHFR-211ENST00000535897 OGNP20774 298 aaKnown RBP7.52□□□□□ -1.21
CHFR-211ENST00000535897 MAOAP21397 527 aa7.52□□□□□ -1.21
CHFR-211ENST00000535897 RPL22P35268 128 aaKnown RBP7.52□□□□□ -1.21
CHFR-211ENST00000535897 CLCN7P51798 805 aa7.52□□□□□ -1.21
CHFR-211ENST00000535897 ADARP55265 1226 aaKnown RBP7.52□□□□□ -1.21
CHFR-211ENST00000535897 NUP107P57740 925 aa7.52□□□□□ -1.21
CHFR-211ENST00000535897 MLF1P58340 268 aa7.52□□□□□ -1.21
CHFR-211ENST00000535897 MPP1Q00013 466 aa7.52□□□□□ -1.21
CHFR-211ENST00000535897 PLGLB1Q02325 96 aa7.52□□□□□ -1.21
CHFR-211ENST00000535897 TFF3Q07654 80 aa7.52□□□□□ -1.21
CHFR-211ENST00000535897 HYAL2Q12891 473 aa7.52□□□□□ -1.21
CHFR-211ENST00000535897 THOC5Q13769 683 aaKnown RBP7.52□□□□□ -1.21
CHFR-211ENST00000535897 HERC3Q15034 1050 aa7.52□□□□□ -1.21
CHFR-211ENST00000535897 CEBPEQ15744 281 aa7.52□□□□□ -1.21
CHFR-211ENST00000535897 CMPK2Q5EBM0 449 aa7.52□□□□□ -1.21
CHFR-211ENST00000535897 ZNF470Q6ECI4 717 aa7.52□□□□□ -1.21
CHFR-211ENST00000535897 NEPROQ6NW34 567 aa7.52□□□□□ -1.21
CHFR-211ENST00000535897 PAOXQ6QHF9 649 aa7.52□□□□□ -1.21
CHFR-211ENST00000535897 PIWIL4Q7Z3Z4 852 aaKnown RBP7.52□□□□□ -1.21
CHFR-211ENST00000535897 ZNF227Q86WZ6 799 aa7.52□□□□□ -1.21
CHFR-211ENST00000535897 CILP2Q8IUL8 1156 aa7.52□□□□□ -1.21
CHFR-211ENST00000535897 PALM2Q8IXS6 379 aa7.52□□□□□ -1.21
CHFR-211ENST00000535897 LRRC56Q8IYG6 542 aaPredicted RBP7.52□□□□□ -1.21
CHFR-211ENST00000535897 ZZZ3Q8IYH5 903 aa7.52□□□□□ -1.21
CHFR-211ENST00000535897 CPNE9Q8IYJ1 553 aa7.52□□□□□ -1.21
CHFR-211ENST00000535897 MYRIPQ8NFW9 859 aa7.52□□□□□ -1.21
CHFR-211ENST00000535897 GIMAP7Q8NHV1 300 aa7.52□□□□□ -1.21
CHFR-211ENST00000535897 ASB11Q8WXH4 323 aa7.52□□□□□ -1.21
CHFR-211ENST00000535897 TM4SF19Q96DZ7 209 aa7.52□□□□□ -1.21
CHFR-211ENST00000535897 PWWP2AQ96N64 755 aa7.52□□□□□ -1.21
CHFR-211ENST00000535897 SLC30A3Q99726 388 aa7.52□□□□□ -1.21
CHFR-211ENST00000535897 FOXC2Q99958 501 aa7.52□□□□□ -1.21
CHFR-211ENST00000535897 KIFC1Q9BW19 673 aa7.52□□□□□ -1.21
CHFR-211ENST00000535897 POLDIP3Q9BY77 421 aaKnown RBP7.52□□□□□ -1.21
CHFR-211ENST00000535897 FAM129AQ9BZQ8 928 aa7.52□□□□□ -1.21
CHFR-211ENST00000535897 SLC6A16Q9GZN6 736 aa7.52□□□□□ -1.21
CHFR-211ENST00000535897 ATG10Q9H0Y0 220 aa7.52□□□□□ -1.21
CHFR-211ENST00000535897 RHBGQ9H310 441 aa7.52□□□□□ -1.21
CHFR-211ENST00000535897 INTS10Q9NVR2 710 aaKnown RBP7.52□□□□□ -1.21
CHFR-211ENST00000535897 SAMD15Q9P1V8 674 aa7.52□□□□□ -1.21
CHFR-211ENST00000535897 FBXW2Q9UKT8 454 aa7.52□□□□□ -1.21
CHFR-211ENST00000535897 SH2B3Q9UQQ2 575 aa7.52□□□□□ -1.21
CHFR-211ENST00000535897 HRH3Q9Y5N1 445 aa7.52□□□□□ -1.21
CHFR-211ENST00000535897 SLC22A7Q9Y694 548 aa7.52□□□□□ -1.21
CHFR-211ENST00000535897 PRRC2AP48634 2157 aaKnown RBP7.52□□□□□ -1.21
CHFR-211ENST00000535897 FAM221AA4D161 298 aa7.51□□□□□ -1.21
CHFR-211ENST00000535897 SAGE2PA6NJ88 616 aa7.51□□□□□ -1.21
CHFR-211ENST00000535897 FAM166BA8MTA8 275 aa7.51□□□□□ -1.21
CHFR-211ENST00000535897 NPIPA2E9PIF3 369 aa7.51□□□□□ -1.21
CHFR-211ENST00000535897 NPIPA3F8WFD2 350 aa7.51□□□□□ -1.21
CHFR-211ENST00000535897 GFYI3L273 518 aa7.51□□□□□ -1.21
CHFR-211ENST00000535897 OR1F1O43749 312 aa7.51□□□□□ -1.21
CHFR-211ENST00000535897 LCMT2O60294 686 aaKnown RBP7.51□□□□□ -1.21
CHFR-211ENST00000535897 CEP104O60308 925 aa7.51□□□□□ -1.21
CHFR-211ENST00000535897 GALR3O60755 368 aaPredicted RBP7.51□□□□□ -1.21
CHFR-211ENST00000535897 ITGA10O75578 1167 aa7.51□□□□□ -1.21
CHFR-211ENST00000535897 MYO1DO94832 1006 aa7.51□□□□□ -1.21
CHFR-211ENST00000535897 B3GALT4O96024 378 aa7.51□□□□□ -1.21
CHFR-211ENST00000535897 TUBB4AP04350 444 aa7.51□□□□□ -1.21
CHFR-211ENST00000535897 ZNF888P0CJ79 500 aaPredicted RBP7.51□□□□□ -1.21
CHFR-211ENST00000535897 ALOX12P18054 663 aa7.51□□□□□ -1.21
CHFR-211ENST00000535897 DNASE1P24855 282 aa7.51□□□□□ -1.21
CHFR-211ENST00000535897 ACVR2AP27037 513 aa7.51□□□□□ -1.21
CHFR-211ENST00000535897 TRHRP34981 398 aaPredicted RBP7.51□□□□□ -1.21
CHFR-211ENST00000535897 HNF4AP41235 474 aa7.51□□□□□ -1.21
CHFR-211ENST00000535897 SKIV2L2P42285 1042 aaKnown RBP7.51□□□□□ -1.21
CHFR-211ENST00000535897 CLCN2P51788 898 aa7.51□□□□□ -1.21
CHFR-211ENST00000535897 DGKQP52824 942 aa7.51□□□□□ -1.21
CHFR-211ENST00000535897 BTG2P78543 158 aa7.51□□□□□ -1.21
CHFR-211ENST00000535897 MEF2AQ02078 507 aaPredicted RBP7.51□□□□□ -1.21
CHFR-211ENST00000535897 RPS6KA1Q15418 735 aa7.51□□□□□ -1.21
CHFR-211ENST00000535897 KIAA0930Q6ICG6 404 aaPredicted RBP7.51□□□□□ -1.21
CHFR-211ENST00000535897 ZNF585AQ6P3V2 769 aa7.51□□□□□ -1.21
CHFR-211ENST00000535897 AGTRAPQ6RW13 159 aa7.51□□□□□ -1.21
CHFR-211ENST00000535897 C4orf22Q6V702 233 aa7.51□□□□□ -1.21
CHFR-211ENST00000535897 RAD9BQ6WBX8 426 aa7.51□□□□□ -1.21
CHFR-211ENST00000535897 MBOAT1Q6ZNC8 495 aa7.51□□□□□ -1.21
CHFR-211ENST00000535897 CENPUQ71F23 418 aa7.51□□□□□ -1.21
CHFR-211ENST00000535897 MDGA2Q7Z553 956 aa7.51□□□□□ -1.21
CHFR-211ENST00000535897 SLC13A5Q86YT5 568 aaPredicted RBP7.51□□□□□ -1.21
CHFR-211ENST00000535897 SPNS2Q8IVW8 549 aa7.51□□□□□ -1.21
CHFR-211ENST00000535897 TXLNBQ8N3L3 684 aa7.51□□□□□ -1.21
CHFR-211ENST00000535897 TBC1D19Q8N5T2 526 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms