RNA–Protein interactions for RNA: ENST00000535668.1

CLSTN3-206, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-206ENST00000535668 AKAP6Q13023 2319 aa10.51□□□□□ -0.73
CLSTN3-206ENST00000535668 IGHV3-20A0A0C4DH32 117 aa10.51□□□□□ -0.73
CLSTN3-206ENST00000535668 CTAGE9A4FU28 777 aa10.51□□□□□ -0.73
CLSTN3-206ENST00000535668 A8MUI8 341 aa10.51□□□□□ -0.73
CLSTN3-206ENST00000535668 SGK494L7N484 410 aa10.51□□□□□ -0.73
CLSTN3-206ENST00000535668 MAN1A2O60476 641 aa10.51□□□□□ -0.73
CLSTN3-206ENST00000535668 SLC25A12O75746 678 aa10.51□□□□□ -0.73
CLSTN3-206ENST00000535668 ATXN8OSP0DMR3 200 aa10.51□□□□□ -0.73
CLSTN3-206ENST00000535668 GSTM2P28161 218 aa10.51□□□□□ -0.73
CLSTN3-206ENST00000535668 GABRB3P28472 473 aa10.51□□□□□ -0.73
CLSTN3-206ENST00000535668 COILP38432 576 aaPredicted RBP10.51□□□□□ -0.73
CLSTN3-206ENST00000535668 CYB561P49447 251 aa10.51□□□□□ -0.73
CLSTN3-206ENST00000535668 CCR8P51685 355 aa10.51□□□□□ -0.73
CLSTN3-206ENST00000535668 GPS1Q13098 491 aa10.51□□□□□ -0.73
CLSTN3-206ENST00000535668 CUL1Q13616 776 aa10.51□□□□□ -0.73
CLSTN3-206ENST00000535668 RNFT1Q5M7Z0 435 aa10.51□□□□□ -0.73
CLSTN3-206ENST00000535668 THEMIS2Q5TEJ8 643 aa10.51□□□□□ -0.73
CLSTN3-206ENST00000535668 TTC27Q6P3X3 843 aa10.51□□□□□ -0.73
CLSTN3-206ENST00000535668 GALNTL5Q7Z4T8 443 aa10.51□□□□□ -0.73
CLSTN3-206ENST00000535668 ADCK2Q7Z695 626 aa10.51□□□□□ -0.73
CLSTN3-206ENST00000535668 KLHDC8AQ8IYD2 350 aa10.51□□□□□ -0.73
CLSTN3-206ENST00000535668 CPNE9Q8IYJ1 553 aa10.51□□□□□ -0.73
CLSTN3-206ENST00000535668 APCDD1LQ8NCL9 501 aa10.51□□□□□ -0.73
CLSTN3-206ENST00000535668 ZNF740Q8NDX6 193 aa10.51□□□□□ -0.73
CLSTN3-206ENST00000535668 GABPB2Q8TAK5 448 aaPredicted RBP10.51□□□□□ -0.73
CLSTN3-206ENST00000535668 EEF1AKMT1Q8WVE0 214 aa10.51□□□□□ -0.73
CLSTN3-206ENST00000535668 ATL1Q8WXF7 558 aa10.51□□□□□ -0.73
CLSTN3-206ENST00000535668 SLCO2A1Q92959 643 aa10.51□□□□□ -0.73
CLSTN3-206ENST00000535668 FAM136AQ96C01 138 aa10.51□□□□□ -0.73
CLSTN3-206ENST00000535668 FBXL8Q96CD0 374 aa10.51□□□□□ -0.73
CLSTN3-206ENST00000535668 SNF8Q96H20 258 aa10.51□□□□□ -0.73
CLSTN3-206ENST00000535668 OR4K3Q96R72 315 aa10.51□□□□□ -0.73
CLSTN3-206ENST00000535668 PITHD1Q9GZP4 211 aaPredicted RBP10.51□□□□□ -0.73
CLSTN3-206ENST00000535668 LRFN1Q9P244 771 aa10.51□□□□□ -0.73
CLSTN3-206ENST00000535668 ADAMTS6Q9UKP5 1117 aa10.51□□□□□ -0.73
CLSTN3-206ENST00000535668 SH2B3Q9UQQ2 575 aa10.51□□□□□ -0.73
CLSTN3-206ENST00000535668 CLDN16Q9Y5I7 305 aa10.51□□□□□ -0.73
CLSTN3-206ENST00000535668 SAGE2PA6NJ88 616 aa10.5□□□□□ -0.73
CLSTN3-206ENST00000535668 C19orf84I3L1E1 186 aa10.5□□□□□ -0.73
CLSTN3-206ENST00000535668 CHST10O43529 356 aa10.5□□□□□ -0.73
CLSTN3-206ENST00000535668 RDH16O75452 317 aa10.5□□□□□ -0.73
CLSTN3-206ENST00000535668 F10P00742 488 aa10.5□□□□□ -0.73
CLSTN3-206ENST00000535668 KRT14P02533 472 aa10.5□□□□□ -0.73
CLSTN3-206ENST00000535668 SERPINA6P08185 405 aa10.5□□□□□ -0.73
CLSTN3-206ENST00000535668 ESRRAP11474 423 aaPredicted RBP10.5□□□□□ -0.73
CLSTN3-206ENST00000535668 TFEBP19484 476 aa10.5□□□□□ -0.73
CLSTN3-206ENST00000535668 CDKL1Q00532 357 aa10.5□□□□□ -0.73
CLSTN3-206ENST00000535668 PMP22Q01453 160 aa10.5□□□□□ -0.73
CLSTN3-206ENST00000535668 TFF3Q07654 80 aa10.5□□□□□ -0.73
CLSTN3-206ENST00000535668 HYAL2Q12891 473 aa10.5□□□□□ -0.73
CLSTN3-206ENST00000535668 NAE1Q13564 534 aa10.5□□□□□ -0.73
CLSTN3-206ENST00000535668 PHKG1Q16816 387 aa10.5□□□□□ -0.73
CLSTN3-206ENST00000535668 ZNF468Q5VIY5 522 aaPredicted RBP10.5□□□□□ -0.73
CLSTN3-206ENST00000535668 ABHD13Q7L211 337 aa10.5□□□□□ -0.73
CLSTN3-206ENST00000535668 GAS2L3Q86XJ1 694 aa10.5□□□□□ -0.73
CLSTN3-206ENST00000535668 GPALPP1Q8IXQ4 340 aa10.5□□□□□ -0.73
CLSTN3-206ENST00000535668 AMER2Q8N7J2 671 aa10.5□□□□□ -0.73
CLSTN3-206ENST00000535668 TRPV3Q8NET8 790 aa10.5□□□□□ -0.73
CLSTN3-206ENST00000535668 LILRB4Q8NHJ6 448 aa10.5□□□□□ -0.73
CLSTN3-206ENST00000535668 AGAP11Q8TF27 550 aa10.5□□□□□ -0.73
CLSTN3-206ENST00000535668 ZNF669Q96BR6 464 aaPredicted RBP10.5□□□□□ -0.73
CLSTN3-206ENST00000535668 NPLQ9BXD5 320 aaPredicted RBP10.5□□□□□ -0.73
CLSTN3-206ENST00000535668 PELI2Q9HAT8 420 aa10.5□□□□□ -0.73
CLSTN3-206ENST00000535668 SLC24A3Q9HC58 644 aa10.5□□□□□ -0.73
CLSTN3-206ENST00000535668 PRDM9Q9NQV7 894 aa10.5□□□□□ -0.73
CLSTN3-206ENST00000535668 FBXO6Q9NRD1 293 aaPredicted RBP10.5□□□□□ -0.73
CLSTN3-206ENST00000535668 HCN3Q9P1Z3 774 aa10.5□□□□□ -0.73
CLSTN3-206ENST00000535668 TRMT6Q9UJA5 497 aaKnown RBP10.5□□□□□ -0.73
CLSTN3-206ENST00000535668 KLF13Q9Y2Y9 288 aaPredicted RBP10.5□□□□□ -0.73
CLSTN3-206ENST00000535668 MMACHCQ9Y4U1 282 aa10.5□□□□□ -0.73
CLSTN3-206ENST00000535668 FAM221AA4D161 298 aa10.49□□□□□ -0.73
CLSTN3-206ENST00000535668 OR2W5A6NFC9 320 aa10.49□□□□□ -0.73
CLSTN3-206ENST00000535668 URADA6NGE7 173 aa10.49□□□□□ -0.73
CLSTN3-206ENST00000535668 NPIPA5E9PKD4 350 aa10.49□□□□□ -0.73
CLSTN3-206ENST00000535668 PRRG2O14669 202 aa10.49□□□□□ -0.73
CLSTN3-206ENST00000535668 NDC80O14777 642 aa10.49□□□□□ -0.73
CLSTN3-206ENST00000535668 PRMT3O60678 531 aa10.49□□□□□ -0.73
CLSTN3-206ENST00000535668 SYF2O95926 243 aaKnown RBP10.49□□□□□ -0.73
CLSTN3-206ENST00000535668 AHSGP02765 367 aa10.49□□□□□ -0.73
CLSTN3-206ENST00000535668 HIST1H2AGP0C0S8 130 aaPredicted RBP10.49□□□□□ -0.73
CLSTN3-206ENST00000535668 CCDC175P0C221 793 aa10.49□□□□□ -0.73
CLSTN3-206ENST00000535668 CDH1P12830 882 aa10.49□□□□□ -0.73
CLSTN3-206ENST00000535668 ZNF24P17028 368 aa10.49□□□□□ -0.73
CLSTN3-206ENST00000535668 PGAM1P18669 254 aa10.49□□□□□ -0.73
CLSTN3-206ENST00000535668 HIST1H2ADP20671 130 aa10.49□□□□□ -0.73
CLSTN3-206ENST00000535668 TPP2P29144 1249 aaPredicted RBP10.49□□□□□ -0.73
CLSTN3-206ENST00000535668 FNTAP49354 379 aa10.49□□□□□ -0.73
CLSTN3-206ENST00000535668 OR4D2P58180 307 aa10.49□□□□□ -0.73
CLSTN3-206ENST00000535668 ILF2Q12905 390 aaKnown RBP10.49□□□□□ -0.73
CLSTN3-206ENST00000535668 CRYMQ14894 314 aa10.49□□□□□ -0.73
CLSTN3-206ENST00000535668 PPP1R3AQ16821 1122 aa10.49□□□□□ -0.73
CLSTN3-206ENST00000535668 ADPRMQ3LIE5 342 aa10.49□□□□□ -0.73
CLSTN3-206ENST00000535668 HSP90AA5PQ58FG0 334 aa10.49□□□□□ -0.73
CLSTN3-206ENST00000535668 CASC4Q6P4E1 433 aa10.49□□□□□ -0.73
CLSTN3-206ENST00000535668 PAQR3Q6TCH7 311 aa10.49□□□□□ -0.73
CLSTN3-206ENST00000535668 RGS9BPQ6ZS82 235 aa10.49□□□□□ -0.73
CLSTN3-206ENST00000535668 PNPLA5Q7Z6Z6 429 aaPredicted RBP10.49□□□□□ -0.73
CLSTN3-206ENST00000535668 SCUBE1Q8IWY4 988 aa10.49□□□□□ -0.73
CLSTN3-206ENST00000535668 PPIL6Q8IXY8 311 aa10.49□□□□□ -0.73
CLSTN3-206ENST00000535668 TBC1D19Q8N5T2 526 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms