RNA–Protein interactions for RNA: ENST00000534705.5

USP48-215, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 566 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-215ENST00000534705 LRRC2Q9BYS8 371 aa3.19□□□□□ -1.9
USP48-215ENST00000534705 UPF3AQ9H1J1 476 aaKnown RBP3.19□□□□□ -1.9
USP48-215ENST00000534705 APOBEC3GQ9HC16 384 aaKnown RBP3.19□□□□□ -1.9
USP48-215ENST00000534705 HPF1Q9NWY4 346 aa3.19□□□□□ -1.9
USP48-215ENST00000534705 ADPRHL2Q9NX46 363 aa3.19□□□□□ -1.9
USP48-215ENST00000534705 FBXL17Q9UF56 701 aa3.19□□□□□ -1.9
USP48-215ENST00000534705 AMACRQ9UHK6 382 aa3.19□□□□□ -1.9
USP48-215ENST00000534705 CCPG1Q9ULG6 757 aa3.19□□□□□ -1.9
USP48-215ENST00000534705 B3GALT5Q9Y2C3 310 aa3.19□□□□□ -1.9
USP48-215ENST00000534705 MTF2Q9Y483 593 aaPredicted RBP3.19□□□□□ -1.9
USP48-215ENST00000534705 IKBKGQ9Y6K9 419 aa3.19□□□□□ -1.9
USP48-215ENST00000534705 COL4A6Q14031 1691 aa3.19□□□□□ -1.9
USP48-215ENST00000534705 DOCK6Q96HP0 2047 aa3.19□□□□□ -1.9
USP48-215ENST00000534705 ABCB11O95342 1321 aa3.19□□□□□ -1.9
USP48-215ENST00000534705 FRMPD4Q14CM0 1322 aa3.19□□□□□ -1.9
USP48-215ENST00000534705 A0A1B0GUA9 196 aa3.18□□□□□ -1.9
USP48-215ENST00000534705 A8MXE2 369 aa3.18□□□□□ -1.9
USP48-215ENST00000534705 J3QR06 171 aa3.18□□□□□ -1.9
USP48-215ENST00000534705 DDX39AO00148 427 aaKnown RBP3.18□□□□□ -1.9
USP48-215ENST00000534705 DNM1LO00429 736 aa3.18□□□□□ -1.9
USP48-215ENST00000534705 IFIT3O14879 490 aaKnown RBP3.18□□□□□ -1.9
USP48-215ENST00000534705 ZBTB5O15062 677 aa3.18□□□□□ -1.9
USP48-215ENST00000534705 NDUFS4O43181 175 aa3.18□□□□□ -1.9
USP48-215ENST00000534705 SLC7A4O43246 635 aa3.18□□□□□ -1.9
USP48-215ENST00000534705 ZBTB43O43298 467 aa3.18□□□□□ -1.9
USP48-215ENST00000534705 STX6O43752 255 aa3.18□□□□□ -1.9
USP48-215ENST00000534705 DUSP11O75319 330 aaKnown RBP3.18□□□□□ -1.9
USP48-215ENST00000534705 GJB3O75712 270 aa3.18□□□□□ -1.9
USP48-215ENST00000534705 NEBLO76041 1014 aa3.18□□□□□ -1.9
USP48-215ENST00000534705 TPPPO94811 219 aa3.18□□□□□ -1.9
USP48-215ENST00000534705 GOSR1O95249 250 aa3.18□□□□□ -1.9
USP48-215ENST00000534705 BMP10O95393 424 aa3.18□□□□□ -1.9
USP48-215ENST00000534705 PLEKHA8P1O95397 391 aa3.18□□□□□ -1.9
USP48-215ENST00000534705 GGPS1O95749 300 aa3.18□□□□□ -1.9
USP48-215ENST00000534705 PGK1P00558 417 aa3.18□□□□□ -1.9
USP48-215ENST00000534705 CCDC192P0DO97 292 aa3.18□□□□□ -1.9
USP48-215ENST00000534705 IGHV4-38-2P0DP08 117 aa3.18□□□□□ -1.9
USP48-215ENST00000534705 IFNAR1P17181 557 aa3.18□□□□□ -1.9
USP48-215ENST00000534705 HADHAP40939 763 aa3.18□□□□□ -1.9
USP48-215ENST00000534705 MNAT1P51948 309 aa3.18□□□□□ -1.9
USP48-215ENST00000534705 GSDMDP57764 484 aa3.18□□□□□ -1.9
USP48-215ENST00000534705 RPS6P62753 249 aaKnown RBP3.18□□□□□ -1.9
USP48-215ENST00000534705 AP1B1Q10567 949 aa3.18□□□□□ -1.9
USP48-215ENST00000534705 TMED1Q13445 227 aa3.18□□□□□ -1.9
USP48-215ENST00000534705 SLMAPQ14BN4 828 aa3.18□□□□□ -1.9
USP48-215ENST00000534705 NTRK2Q16620 822 aa3.18□□□□□ -1.9
USP48-215ENST00000534705 ZNF876PQ49A33 203 aa3.18□□□□□ -1.9
USP48-215ENST00000534705 ZC2HC1CQ53FD0 456 aaPredicted RBP3.18□□□□□ -1.9
USP48-215ENST00000534705 CMPK2Q5EBM0 449 aa3.18□□□□□ -1.9
USP48-215ENST00000534705 GARNL3Q5VVW2 1013 aa3.18□□□□□ -1.9
USP48-215ENST00000534705 KIAA0930Q6ICG6 404 aaPredicted RBP3.18□□□□□ -1.9
USP48-215ENST00000534705 C6orf89Q6UWU4 347 aa3.18□□□□□ -1.9
USP48-215ENST00000534705 KRTAP5-2Q701N4 177 aa3.18□□□□□ -1.9
USP48-215ENST00000534705 SPATA21Q7Z572 469 aa3.18□□□□□ -1.9
USP48-215ENST00000534705 PTOV1Q86YD1 416 aa3.18□□□□□ -1.9
USP48-215ENST00000534705 FBXO16Q8IX29 292 aaPredicted RBP3.18□□□□□ -1.9
USP48-215ENST00000534705 FBXL16Q8N461 479 aa3.18□□□□□ -1.9
USP48-215ENST00000534705 C10orf53Q8N6V4 93 aa3.18□□□□□ -1.9
USP48-215ENST00000534705 STPG4Q8N801 248 aa3.18□□□□□ -1.9
USP48-215ENST00000534705 TRIM58Q8NG06 486 aa3.18□□□□□ -1.9
USP48-215ENST00000534705 MOSPD2Q8NHP6 518 aa3.18□□□□□ -1.9
USP48-215ENST00000534705 TAF4BQ92750 862 aa3.18□□□□□ -1.9
USP48-215ENST00000534705 TAAR1Q96RJ0 339 aa3.18□□□□□ -1.9
USP48-215ENST00000534705 FNBP1Q96RU3 617 aa3.18□□□□□ -1.9
USP48-215ENST00000534705 ASCL2Q99929 193 aa3.18□□□□□ -1.9
USP48-215ENST00000534705 UBAC1Q9BSL1 405 aa3.18□□□□□ -1.9
USP48-215ENST00000534705 CRACR2AQ9BSW2 395 aa3.18□□□□□ -1.9
USP48-215ENST00000534705 PI4K2AQ9BTU6 479 aa3.18□□□□□ -1.9
USP48-215ENST00000534705 APOL6Q9BWW8 343 aa3.18□□□□□ -1.9
USP48-215ENST00000534705 SPZ1Q9BXG8 430 aa3.18□□□□□ -1.9
USP48-215ENST00000534705 PARD6BQ9BYG5 372 aa3.18□□□□□ -1.9
USP48-215ENST00000534705 BARHL1Q9BZE3 327 aa3.18□□□□□ -1.9
USP48-215ENST00000534705 C11orf49Q9H6J7 331 aa3.18□□□□□ -1.9
USP48-215ENST00000534705 COPS7BQ9H9Q2 264 aaPredicted RBP3.18□□□□□ -1.9
USP48-215ENST00000534705 TRPC7Q9HCX4 862 aa3.18□□□□□ -1.9
USP48-215ENST00000534705 PDE7BQ9NP56 450 aa3.18□□□□□ -1.9
USP48-215ENST00000534705 DNAJB4Q9UDY4 337 aa3.18□□□□□ -1.9
USP48-215ENST00000534705 XPO7Q9UIA9 1087 aaKnown RBP3.18□□□□□ -1.9
USP48-215ENST00000534705 ZNF510Q9Y2H8 683 aa3.18□□□□□ -1.9
USP48-215ENST00000534705 CCL27Q9Y4X3 112 aa3.18□□□□□ -1.9
USP48-215ENST00000534705 DENND4CQ5VZ89 1909 aa3.18□□□□□ -1.9
USP48-215ENST00000534705 UNC80Q8N2C7 3258 aa3.18□□□□□ -1.9
USP48-215ENST00000534705 GRIN2DO15399 1336 aa3.18□□□□□ -1.9
USP48-215ENST00000534705 PRRC2BQ5JSZ5 2229 aaKnown RBP3.17□□□□□ -1.9
USP48-215ENST00000534705 VWA8A3KMH1 1905 aa3.17□□□□□ -1.9
USP48-215ENST00000534705 MYO10Q9HD67 2058 aa3.17□□□□□ -1.9
USP48-215ENST00000534705 ERICH2A1L162 156 aa3.17□□□□□ -1.9
USP48-215ENST00000534705 ASB14A6NK59 587 aa3.17□□□□□ -1.9
USP48-215ENST00000534705 TMEM189-UBE2V1I3L0A0 370 aa3.17□□□□□ -1.9
USP48-215ENST00000534705 MEIS2O14770 477 aa3.17□□□□□ -1.9
USP48-215ENST00000534705 NDC80O14777 642 aa3.17□□□□□ -1.9
USP48-215ENST00000534705 GPR137BO60478 399 aa3.17□□□□□ -1.9
USP48-215ENST00000534705 MITFO75030 526 aaPredicted RBP3.17□□□□□ -1.9
USP48-215ENST00000534705 TBX10O75333 385 aa3.17□□□□□ -1.9
USP48-215ENST00000534705 PENKP01210 267 aaPredicted RBP3.17□□□□□ -1.9
USP48-215ENST00000534705 TSHBP01222 138 aa3.17□□□□□ -1.9
USP48-215ENST00000534705 LIPFP07098 398 aa3.17□□□□□ -1.9
USP48-215ENST00000534705 CCDC175P0C221 793 aa3.17□□□□□ -1.9
USP48-215ENST00000534705 MYBL1P10243 752 aa3.17□□□□□ -1.9
USP48-215ENST00000534705 ERVK-10P10266 1014 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms