RNA–Protein interactions for RNA: ENST00000534106.2

CHMP4A-208, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 5

Gene CHMP4A, Length 370 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-208ENST00000534106 PON1P27169 355 aa2.81□□□□□ -1.96
CHMP4A-208ENST00000534106 PBLDP30039 288 aaPredicted RBP2.81□□□□□ -1.96
CHMP4A-208ENST00000534106 CDH5P33151 784 aaPredicted RBP2.81□□□□□ -1.96
CHMP4A-208ENST00000534106 PTPN7P35236 360 aa2.81□□□□□ -1.96
CHMP4A-208ENST00000534106 RFC3P40938 356 aa2.81□□□□□ -1.96
CHMP4A-208ENST00000534106 GRIA3P42263 894 aa2.81□□□□□ -1.96
CHMP4A-208ENST00000534106 SYKP43405 635 aa2.81□□□□□ -1.96
CHMP4A-208ENST00000534106 GABRA4P48169 554 aa2.81□□□□□ -1.96
CHMP4A-208ENST00000534106 ZNF81P51508 661 aa2.81□□□□□ -1.96
CHMP4A-208ENST00000534106 RENBPP51606 427 aa2.81□□□□□ -1.96
CHMP4A-208ENST00000534106 SNX16P57768 344 aa2.81□□□□□ -1.96
CHMP4A-208ENST00000534106 TPI1P60174 286 aa2.81□□□□□ -1.96
CHMP4A-208ENST00000534106 RAP2BP61225 183 aa2.81□□□□□ -1.96
CHMP4A-208ENST00000534106 RPL7AP62424 266 aaKnown RBP2.81□□□□□ -1.96
CHMP4A-208ENST00000534106 MRPS35P82673 323 aaKnown RBP2.81□□□□□ -1.96
CHMP4A-208ENST00000534106 OGDHQ02218 1023 aa2.81□□□□□ -1.96
CHMP4A-208ENST00000534106 EEF1A2Q05639 463 aaKnown RBP2.81□□□□□ -1.96
CHMP4A-208ENST00000534106 IL10RBQ08334 325 aa2.81□□□□□ -1.96
CHMP4A-208ENST00000534106 PMPCAQ10713 525 aa2.81□□□□□ -1.96
CHMP4A-208ENST00000534106 TMEM115Q12893 351 aaPredicted RBP2.81□□□□□ -1.96
CHMP4A-208ENST00000534106 PTP4A2Q12974 167 aa2.81□□□□□ -1.96
CHMP4A-208ENST00000534106 PRKG2Q13237 762 aa2.81□□□□□ -1.96
CHMP4A-208ENST00000534106 XRCC4Q13426 336 aa2.81□□□□□ -1.96
CHMP4A-208ENST00000534106 RBBP7Q16576 425 aa2.81□□□□□ -1.96
CHMP4A-208ENST00000534106 ZNF766Q5HY98 468 aa2.81□□□□□ -1.96
CHMP4A-208ENST00000534106 C10orf62Q5T681 223 aaPredicted RBP2.81□□□□□ -1.96
CHMP4A-208ENST00000534106 HENMT1Q5T8I9 393 aaKnown RBP2.81□□□□□ -1.96
CHMP4A-208ENST00000534106 IRAK1BP1Q5VVH5 260 aa2.81□□□□□ -1.96
CHMP4A-208ENST00000534106 TXNRD3NBQ6F5E7 133 aa2.81□□□□□ -1.96
CHMP4A-208ENST00000534106 RHBDD2Q6NTF9 364 aa2.81□□□□□ -1.96
CHMP4A-208ENST00000534106 HIBCHQ6NVY1 386 aaPredicted RBP2.81□□□□□ -1.96
CHMP4A-208ENST00000534106 TTI2Q6NXR4 508 aa2.81□□□□□ -1.96
CHMP4A-208ENST00000534106 CAVIN1Q6NZI2 390 aaKnown RBP2.81□□□□□ -1.96
CHMP4A-208ENST00000534106 PGM2L1Q6PCE3 622 aa2.81□□□□□ -1.96
CHMP4A-208ENST00000534106 WASH2PQ6VEQ5 465 aa2.81□□□□□ -1.96
CHMP4A-208ENST00000534106 Q6ZNX1 250 aa2.81□□□□□ -1.96
CHMP4A-208ENST00000534106 USP45Q70EL2 814 aa2.81□□□□□ -1.96
CHMP4A-208ENST00000534106 COX15Q7KZN9 410 aa2.81□□□□□ -1.96
CHMP4A-208ENST00000534106 DET1Q7L5Y6 550 aa2.81□□□□□ -1.96
CHMP4A-208ENST00000534106 STRADAQ7RTN6 431 aa2.81□□□□□ -1.96
CHMP4A-208ENST00000534106 LRRTM4Q86VH4 590 aa2.81□□□□□ -1.96
CHMP4A-208ENST00000534106 OOSP2Q86WS3 158 aa2.81□□□□□ -1.96
CHMP4A-208ENST00000534106 SIAH3Q8IW03 269 aa2.81□□□□□ -1.96
CHMP4A-208ENST00000534106 RASGEF1AQ8N9B8 481 aa2.81□□□□□ -1.96
CHMP4A-208ENST00000534106 CLRN3Q8NCR9 226 aa2.81□□□□□ -1.96
CHMP4A-208ENST00000534106 MAPK1IP1LQ8NDC0 245 aa2.81□□□□□ -1.96
CHMP4A-208ENST00000534106 LPCAT1Q8NF37 534 aa2.81□□□□□ -1.96
CHMP4A-208ENST00000534106 GOT1L1Q8NHS2 421 aaPredicted RBP2.81□□□□□ -1.96
CHMP4A-208ENST00000534106 CCDC110Q8TBZ0 833 aa2.81□□□□□ -1.96
CHMP4A-208ENST00000534106 SCARB1Q8WTV0 552 aa2.81□□□□□ -1.96
CHMP4A-208ENST00000534106 COG1Q8WTW3 980 aa2.81□□□□□ -1.96
CHMP4A-208ENST00000534106 GLYATL1Q969I3 302 aa2.81□□□□□ -1.96
CHMP4A-208ENST00000534106 CCDC47Q96A33 483 aaKnown RBP2.81□□□□□ -1.96
CHMP4A-208ENST00000534106 NTAN1Q96AB6 310 aa2.81□□□□□ -1.96
CHMP4A-208ENST00000534106 RMND5BQ96G75 393 aaPredicted RBP2.81□□□□□ -1.96
CHMP4A-208ENST00000534106 SIGLEC12Q96PQ1 595 aa2.81□□□□□ -1.96
CHMP4A-208ENST00000534106 PEBP4Q96S96 227 aa2.81□□□□□ -1.96
CHMP4A-208ENST00000534106 VKORC1Q9BQB6 163 aa2.81□□□□□ -1.96
CHMP4A-208ENST00000534106 VPS16Q9H269 839 aa2.81□□□□□ -1.96
CHMP4A-208ENST00000534106 DHX35Q9H5Z1 703 aaKnown RBP2.81□□□□□ -1.96
CHMP4A-208ENST00000534106 CATSPERBQ9H7T0 1116 aa2.81□□□□□ -1.96
CHMP4A-208ENST00000534106 KCNJ16Q9NPI9 418 aa2.81□□□□□ -1.96
CHMP4A-208ENST00000534106 RASSF1Q9NS23 344 aa2.81□□□□□ -1.96
CHMP4A-208ENST00000534106 MKS1Q9NXB0 559 aa2.81□□□□□ -1.96
CHMP4A-208ENST00000534106 KCTD5Q9NXV2 234 aa2.81□□□□□ -1.96
CHMP4A-208ENST00000534106 SPHK1Q9NYA1 384 aa2.81□□□□□ -1.96
CHMP4A-208ENST00000534106 CWC15Q9P013 229 aaKnown RBP2.81□□□□□ -1.96
CHMP4A-208ENST00000534106 KCNN3Q9UGI6 736 aa2.81□□□□□ -1.96
CHMP4A-208ENST00000534106 POMT2Q9UKY4 750 aa2.81□□□□□ -1.96
CHMP4A-208ENST00000534106 L3MBTL1Q9Y468 752 aa2.81□□□□□ -1.96
CHMP4A-208ENST00000534106 ANKRD36A6QL64 1941 aa2.81□□□□□ -1.96
CHMP4A-208ENST00000534106 TENM1Q9UKZ4 2725 aa2.81□□□□□ -1.96
CHMP4A-208ENST00000534106 INTS1Q8N201 2190 aaKnown RBP2.8□□□□□ -1.96
CHMP4A-208ENST00000534106 GTF3C1Q12789 2109 aa2.8□□□□□ -1.96
CHMP4A-208ENST00000534106 PRKDCP78527 4128 aaKnown RBP2.8□□□□□ -1.96
CHMP4A-208ENST00000534106 IGHV3-20A0A0C4DH32 117 aa2.8□□□□□ -1.96
CHMP4A-208ENST00000534106 FAM237BA0A1B0GVD1 139 aa2.8□□□□□ -1.96
CHMP4A-208ENST00000534106 KLHL33A6NCF5 533 aa2.8□□□□□ -1.96
CHMP4A-208ENST00000534106 OR5H15A6NDH6 313 aa2.8□□□□□ -1.96
CHMP4A-208ENST00000534106 AKAP10O43572 662 aa2.8□□□□□ -1.96
CHMP4A-208ENST00000534106 BUD23O43709 281 aaKnown RBP2.8□□□□□ -1.96
CHMP4A-208ENST00000534106 KDM1AO60341 852 aa2.8□□□□□ -1.96
CHMP4A-208ENST00000534106 SOCS5O75159 536 aa2.8□□□□□ -1.96
CHMP4A-208ENST00000534106 ERN1O75460 977 aaKnown RBP2.8□□□□□ -1.96
CHMP4A-208ENST00000534106 MT-CYBP00156 380 aaPredicted RBP2.8□□□□□ -1.96
CHMP4A-208ENST00000534106 MYL1P05976 194 aa2.8□□□□□ -1.96
CHMP4A-208ENST00000534106 TPM2P07951 284 aa2.8□□□□□ -1.96
CHMP4A-208ENST00000534106 MMP2P08253 660 aa2.8□□□□□ -1.96
CHMP4A-208ENST00000534106 HBQ1P09105 142 aa2.8□□□□□ -1.96
CHMP4A-208ENST00000534106 MYBL2P10244 700 aa2.8□□□□□ -1.96
CHMP4A-208ENST00000534106 MTHFD1P11586 935 aaKnown RBP2.8□□□□□ -1.96
CHMP4A-208ENST00000534106 MTHFD2P13995 350 aa2.8□□□□□ -1.96
CHMP4A-208ENST00000534106 TCF4P15884 667 aa2.8□□□□□ -1.96
CHMP4A-208ENST00000534106 CD53P19397 219 aa2.8□□□□□ -1.96
CHMP4A-208ENST00000534106 HLA-DPA1P20036 260 aa2.8□□□□□ -1.96
CHMP4A-208ENST00000534106 GPD1P21695 349 aa2.8□□□□□ -1.96
CHMP4A-208ENST00000534106 MMP8P22894 467 aa2.8□□□□□ -1.96
CHMP4A-208ENST00000534106 CHRNB4P30926 498 aa2.8□□□□□ -1.96
CHMP4A-208ENST00000534106 HALP42357 657 aa2.8□□□□□ -1.96
CHMP4A-208ENST00000534106 PTPN9P43378 593 aa2.8□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 649.6 ms