RNA–Protein interactions for RNA: ENST00000533897.1

CTSC-208, Transcript of cathepsin C, human

TSL 2

Gene CTSC, Length 4,344 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTSC-208	ENST00000533897	AFF4	Q9UHB7	1163 aa	Known RBP	4.24	□□□□□ -1.73
CTSC-208	ENST00000533897	FNDC3A	Q9Y2H6	1198 aa	Known RBP	4.24	□□□□□ -1.73
CTSC-208	ENST00000533897	PRG3	Q9Y2Y8	225 aa	Predicted RBP	4.24	□□□□□ -1.73
CTSC-208	ENST00000533897	NOX1	Q9Y5S8	564 aa		4.24	□□□□□ -1.73
CTSC-208	ENST00000533897	PRAMEF27	A3QJZ7	478 aa		4.24	□□□□□ -1.73
CTSC-208	ENST00000533897	SH3D21	A4FU49	640 aa		4.24	□□□□□ -1.73
CTSC-208	ENST00000533897	ARHGEF33	A8MVX0	844 aa		4.24	□□□□□ -1.73
CTSC-208	ENST00000533897	FOXE1	O00358	373 aa	Predicted RBP	4.24	□□□□□ -1.73
CTSC-208	ENST00000533897	SCAMP3	O14828	347 aa	Known RBP	4.24	□□□□□ -1.73
CTSC-208	ENST00000533897	DYRK3	O43781	588 aa		4.24	□□□□□ -1.73
CTSC-208	ENST00000533897	UGT2B17	O75795	530 aa		4.24	□□□□□ -1.73
CTSC-208	ENST00000533897	KRT6A	P02538	564 aa		4.24	□□□□□ -1.73
CTSC-208	ENST00000533897	KRT6B	P04259	564 aa		4.24	□□□□□ -1.73
CTSC-208	ENST00000533897	SCG5	P05408	212 aa		4.24	□□□□□ -1.73
CTSC-208	ENST00000533897	RB1	P06400	928 aa		4.24	□□□□□ -1.73
CTSC-208	ENST00000533897	FURIN	P09958	794 aa		4.24	□□□□□ -1.73
CTSC-208	ENST00000533897	CXCR2	P25025	360 aa		4.24	□□□□□ -1.73
CTSC-208	ENST00000533897	RRM2	P31350	389 aa		4.24	□□□□□ -1.73
CTSC-208	ENST00000533897	CD70	P32970	193 aa		4.24	□□□□□ -1.73
CTSC-208	ENST00000533897	CTSO	P43234	321 aa	Predicted RBP	4.24	□□□□□ -1.73
CTSC-208	ENST00000533897	KRT6C	P48668	564 aa		4.24	□□□□□ -1.73
CTSC-208	ENST00000533897	SPINT3	P49223	89 aa		4.24	□□□□□ -1.73
CTSC-208	ENST00000533897	EIF2B2	P49770	351 aa	Known RBP	4.24	□□□□□ -1.73
CTSC-208	ENST00000533897	RGS4	P49798	205 aa		4.24	□□□□□ -1.73
CTSC-208	ENST00000533897	AP1S2	P56377	157 aa		4.24	□□□□□ -1.73
CTSC-208	ENST00000533897	SLC7A9	P82251	487 aa		4.24	□□□□□ -1.73
CTSC-208	ENST00000533897	LMAN2	Q12907	356 aa		4.24	□□□□□ -1.73
CTSC-208	ENST00000533897	CCSMST1	Q4G0I0	132 aa		4.24	□□□□□ -1.73
CTSC-208	ENST00000533897	FAM71E1	Q6IPT2	247 aa		4.24	□□□□□ -1.73
CTSC-208	ENST00000533897	PDE12	Q6L8Q7	609 aa	Known RBP	4.24	□□□□□ -1.73
CTSC-208	ENST00000533897	CD200R1L	Q6Q8B3	271 aa		4.24	□□□□□ -1.73
CTSC-208	ENST00000533897	CD300LD	Q6UXZ3	194 aa		4.24	□□□□□ -1.73
CTSC-208	ENST00000533897	SLCO4C1	Q6ZQN7	724 aa		4.24	□□□□□ -1.73
CTSC-208	ENST00000533897	TECPR1	Q7Z6L1	1165 aa		4.24	□□□□□ -1.73
CTSC-208	ENST00000533897	SAPCD2	Q86UD0	394 aa		4.24	□□□□□ -1.73
CTSC-208	ENST00000533897	CELF2-AS1	Q8N7Q2	184 aa		4.24	□□□□□ -1.73
CTSC-208	ENST00000533897	EFHB	Q8N7U6	833 aa		4.24	□□□□□ -1.73
CTSC-208	ENST00000533897	B3GNT7	Q8NFL0	401 aa		4.24	□□□□□ -1.73
CTSC-208	ENST00000533897	GPR32P1	Q8NGA4	272 aa		4.24	□□□□□ -1.73
CTSC-208	ENST00000533897	HPS1	Q92902	700 aa		4.24	□□□□□ -1.73
CTSC-208	ENST00000533897	MTFMT	Q96DP5	389 aa	Known RBP	4.24	□□□□□ -1.73
CTSC-208	ENST00000533897	ZNF764	Q96H86	408 aa	Predicted RBP	4.24	□□□□□ -1.73
CTSC-208	ENST00000533897	TSSK3	Q96PN8	268 aa		4.24	□□□□□ -1.73
CTSC-208	ENST00000533897	TSEN34	Q9BSV6	310 aa	Known RBP	4.24	□□□□□ -1.73
CTSC-208	ENST00000533897	CCDC32	Q9BV29	185 aa		4.24	□□□□□ -1.73
CTSC-208	ENST00000533897	SGPP1	Q9BX95	441 aa		4.24	□□□□□ -1.73
CTSC-208	ENST00000533897	TPK1	Q9H3S4	243 aa		4.24	□□□□□ -1.73
CTSC-208	ENST00000533897	NDUFB11	Q9NX14	153 aa		4.24	□□□□□ -1.73
CTSC-208	ENST00000533897	TAS2R16	Q9NYV7	291 aa		4.24	□□□□□ -1.73
CTSC-208	ENST00000533897	WWOX	Q9NZC7	414 aa		4.24	□□□□□ -1.73
CTSC-208	ENST00000533897	SLC22A14	Q9Y267	594 aa		4.24	□□□□□ -1.73
CTSC-208	ENST00000533897	CAB39	Q9Y376	341 aa	Predicted RBP	4.24	□□□□□ -1.73
CTSC-208	ENST00000533897	PCDHGB6	Q9Y5F9	930 aa		4.24	□□□□□ -1.73
CTSC-208	ENST00000533897	SNX5	Q9Y5X3	404 aa		4.24	□□□□□ -1.73
CTSC-208	ENST00000533897	PRAMEF33	A0A0G2JMD5	474 aa		4.24	□□□□□ -1.73
CTSC-208	ENST00000533897		H7C4K7	107 aa		4.24	□□□□□ -1.73
CTSC-208	ENST00000533897	GSTA4	O15217	222 aa		4.24	□□□□□ -1.73
CTSC-208	ENST00000533897	TPST2	O60704	377 aa		4.24	□□□□□ -1.73
CTSC-208	ENST00000533897	PRAMEF10	O60809	474 aa		4.24	□□□□□ -1.73
CTSC-208	ENST00000533897	TBL1X	O60907	577 aa		4.24	□□□□□ -1.73
CTSC-208	ENST00000533897	NOL3	O60936	208 aa	Known RBP	4.24	□□□□□ -1.73
CTSC-208	ENST00000533897	CELF2	O95319	508 aa	Known RBP	4.24	□□□□□ -1.73
CTSC-208	ENST00000533897	ANXA5	P08758	320 aa		4.24	□□□□□ -1.73
CTSC-208	ENST00000533897	HBQ1	P09105	142 aa		4.24	□□□□□ -1.73
CTSC-208	ENST00000533897	IMPA1	P29218	277 aa		4.24	□□□□□ -1.73
CTSC-208	ENST00000533897	BMP8B	P34820	402 aa		4.24	□□□□□ -1.73
CTSC-208	ENST00000533897	HBA1	P69905	142 aa		4.24	□□□□□ -1.73
CTSC-208	ENST00000533897	BNC1	Q01954	994 aa		4.24	□□□□□ -1.73
CTSC-208	ENST00000533897	RHAG	Q02094	409 aa		4.24	□□□□□ -1.73
CTSC-208	ENST00000533897	PRKCZ	Q05513	592 aa		4.24	□□□□□ -1.73
CTSC-208	ENST00000533897	ELP6	Q0PNE2	266 aa		4.24	□□□□□ -1.73
CTSC-208	ENST00000533897	CPSF6	Q16630	551 aa	Known RBP eCLIP	4.24	□□□□□ -1.73
CTSC-208	ENST00000533897	TIGD6	Q17RP2	521 aa		4.24	□□□□□ -1.73
CTSC-208	ENST00000533897	MPPE1	Q53F39	396 aa		4.24	□□□□□ -1.73
CTSC-208	ENST00000533897	TPGS2	Q68CL5	300 aa		4.24	□□□□□ -1.73
CTSC-208	ENST00000533897	ZCCHC8	Q6NZY4	707 aa	Known RBP	4.24	□□□□□ -1.73
CTSC-208	ENST00000533897	CEACAM20	Q6UY09	585 aa		4.24	□□□□□ -1.73
CTSC-208	ENST00000533897	AHSA2	Q719I0	299 aa		4.24	□□□□□ -1.73
CTSC-208	ENST00000533897	ARMCX6	Q7L4S7	300 aa		4.24	□□□□□ -1.73
CTSC-208	ENST00000533897	TAS2R42	Q7RTR8	314 aa		4.24	□□□□□ -1.73
CTSC-208	ENST00000533897	PAGE2	Q7Z2X7	111 aa		4.24	□□□□□ -1.73
CTSC-208	ENST00000533897	BMP8A	Q7Z5Y6	402 aa		4.24	□□□□□ -1.73
CTSC-208	ENST00000533897	HJURP	Q8NCD3	748 aa	Predicted RBP	4.24	□□□□□ -1.73
CTSC-208	ENST00000533897	OR4D11	Q8NGI4	311 aa		4.24	□□□□□ -1.73
CTSC-208	ENST00000533897	ZNF486	Q96H40	463 aa	Predicted RBP	4.24	□□□□□ -1.73
CTSC-208	ENST00000533897	MRGPRX3	Q96LB0	322 aa		4.24	□□□□□ -1.73
CTSC-208	ENST00000533897	COL21A1	Q96P44	957 aa		4.24	□□□□□ -1.73
CTSC-208	ENST00000533897	ZIC5	Q96T25	663 aa		4.24	□□□□□ -1.73
CTSC-208	ENST00000533897	CCM2	Q9BSQ5	444 aa		4.24	□□□□□ -1.73
CTSC-208	ENST00000533897	COPS4	Q9BT78	406 aa		4.24	□□□□□ -1.73
CTSC-208	ENST00000533897	SRR	Q9GZT4	340 aa		4.24	□□□□□ -1.73
CTSC-208	ENST00000533897	TWSG1	Q9GZX9	223 aa		4.24	□□□□□ -1.73
CTSC-208	ENST00000533897	C11orf49	Q9H6J7	331 aa		4.24	□□□□□ -1.73
CTSC-208	ENST00000533897	LHX9	Q9NQ69	397 aa		4.24	□□□□□ -1.73
CTSC-208	ENST00000533897	TRPV5	Q9NQA5	729 aa		4.24	□□□□□ -1.73
CTSC-208	ENST00000533897	DYRK4	Q9NR20	520 aa		4.24	□□□□□ -1.73
CTSC-208	ENST00000533897	FZD4	Q9ULV1	537 aa		4.24	□□□□□ -1.73
CTSC-208	ENST00000533897	CKAP5	Q14008	2032 aa		4.23	□□□□□ -1.73
CTSC-208	ENST00000533897	IQCM	A0A1B0GVH7	501 aa		4.23	□□□□□ -1.73
CTSC-208	ENST00000533897	UPK3BL1	B0FP48	263 aa		4.23	□□□□□ -1.73

Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms