RNA–Protein interactions for RNA: ENST00000533499.1

NXF1-216, Transcript of nuclear RNA export factor 1, humanhuman

TSL 5

Gene NXF1, Length 936 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-216ENST00000533499 TRAF6Q9Y4K3 522 aa16.61■□□□□ 0.25
NXF1-216ENST00000533499 DCHS1Q96JQ0 3298 aa16.61■□□□□ 0.25
NXF1-216ENST00000533499 A0A1B0GX78 115 aa16.6■□□□□ 0.25
NXF1-216ENST00000533499 FITM1A5D6W6 292 aa16.6■□□□□ 0.25
NXF1-216ENST00000533499 ZNF860A6NHJ4 632 aa16.6■□□□□ 0.25
NXF1-216ENST00000533499 CDRT15L2A8MXV6 281 aa16.6■□□□□ 0.25
NXF1-216ENST00000533499 H3BMH7 237 aa16.6■□□□□ 0.25
NXF1-216ENST00000533499 STMND1H3BQB6 276 aa16.6■□□□□ 0.25
NXF1-216ENST00000533499 DSCR3O14972 297 aa16.6■□□□□ 0.25
NXF1-216ENST00000533499 MED26O95402 600 aa16.6■□□□□ 0.25
NXF1-216ENST00000533499 AGXTP21549 392 aa16.6■□□□□ 0.25
NXF1-216ENST00000533499 HNRNPH1P31943 449 aaKnown RBP16.6■□□□□ 0.25
NXF1-216ENST00000533499 PIK3CBP42338 1070 aa16.6■□□□□ 0.25
NXF1-216ENST00000533499 OR1D4P47884 311 aa16.6■□□□□ 0.25
NXF1-216ENST00000533499 AVPR1BP47901 424 aa16.6■□□□□ 0.25
NXF1-216ENST00000533499 TGM3Q08188 693 aa16.6■□□□□ 0.25
NXF1-216ENST00000533499 IMPG1Q17R60 797 aa16.6■□□□□ 0.25
NXF1-216ENST00000533499 DEFB134Q4QY38 66 aa16.6■□□□□ 0.25
NXF1-216ENST00000533499 ARHGAP40Q5TG30 622 aa16.6■□□□□ 0.25
NXF1-216ENST00000533499 TMEM214Q6NUQ4 689 aaKnown RBP16.6■□□□□ 0.25
NXF1-216ENST00000533499 TRIM40Q6P9F5 258 aa16.6■□□□□ 0.25
NXF1-216ENST00000533499 CLYBLQ8N0X4 340 aa16.6■□□□□ 0.25
NXF1-216ENST00000533499 OR9A4Q8NGU2 314 aa16.6■□□□□ 0.25
NXF1-216ENST00000533499 OR6Y1Q8NGX8 325 aa16.6■□□□□ 0.25
NXF1-216ENST00000533499 SEC16BQ96JE7 1060 aa16.6■□□□□ 0.25
NXF1-216ENST00000533499 ZNF578Q96N58 590 aaPredicted RBP16.6■□□□□ 0.25
NXF1-216ENST00000533499 C17orf62Q9BQA9 187 aa16.6■□□□□ 0.25
NXF1-216ENST00000533499 MS4A8Q9BY19 250 aa16.6■□□□□ 0.25
NXF1-216ENST00000533499 ILKAPQ9H0C8 392 aaPredicted RBP16.6■□□□□ 0.25
NXF1-216ENST00000533499 COPS7BQ9H9Q2 264 aaPredicted RBP16.6■□□□□ 0.25
NXF1-216ENST00000533499 ZDHHC2Q9UIJ5 367 aa16.6■□□□□ 0.25
NXF1-216ENST00000533499 CACNA1AO00555 2505 aa16.6■□□□□ 0.25
NXF1-216ENST00000533499 SDK2Q58EX2 2172 aa16.6■□□□□ 0.25
NXF1-216ENST00000533499 LRIT2A6NDA9 550 aa16.59■□□□□ 0.25
NXF1-216ENST00000533499 SGK494L7N484 410 aa16.59■□□□□ 0.25
NXF1-216ENST00000533499 MEN1O00255 615 aa16.59■□□□□ 0.25
NXF1-216ENST00000533499 RAD1O60671 282 aa16.59■□□□□ 0.25
NXF1-216ENST00000533499 SKAP2O75563 359 aaPredicted RBP16.59■□□□□ 0.25
NXF1-216ENST00000533499 DXOO77932 396 aaKnown RBP16.59■□□□□ 0.25
NXF1-216ENST00000533499 ALOX12P18054 663 aa16.59■□□□□ 0.25
NXF1-216ENST00000533499 PTX3P26022 381 aaPredicted RBP16.59■□□□□ 0.25
NXF1-216ENST00000533499 BTN3A2P78410 334 aa16.59■□□□□ 0.25
NXF1-216ENST00000533499 BTKQ06187 659 aa16.59■□□□□ 0.25
NXF1-216ENST00000533499 ABHD18Q0P651 414 aa16.59■□□□□ 0.25
NXF1-216ENST00000533499 ABRAXAS2Q15018 415 aa16.59■□□□□ 0.25
NXF1-216ENST00000533499 TBC1D25Q3MII6 688 aa16.59■□□□□ 0.25
NXF1-216ENST00000533499 SPDYAQ5MJ70 313 aa16.59■□□□□ 0.25
NXF1-216ENST00000533499 MANEAQ5SRI9 462 aa16.59■□□□□ 0.25
NXF1-216ENST00000533499 GARNL3Q5VVW2 1013 aa16.59■□□□□ 0.25
NXF1-216ENST00000533499 MLIPQ5VWP3 458 aa16.59■□□□□ 0.25
NXF1-216ENST00000533499 KHDRBS2Q5VWX1 349 aaKnown RBP16.59■□□□□ 0.25
NXF1-216ENST00000533499 RHBDD2Q6NTF9 364 aa16.59■□□□□ 0.25
NXF1-216ENST00000533499 FAM199XQ6PEV8 388 aaPredicted RBP16.59■□□□□ 0.25
NXF1-216ENST00000533499 ATG14Q6ZNE5 492 aa16.59■□□□□ 0.25
NXF1-216ENST00000533499 PRSS41Q7RTY9 318 aa16.59■□□□□ 0.25
NXF1-216ENST00000533499 AFAP1L2Q8N4X5 818 aa16.59■□□□□ 0.25
NXF1-216ENST00000533499 ZNF781Q8N8C0 355 aa16.59■□□□□ 0.25
NXF1-216ENST00000533499 RAB3IL1Q8TBN0 382 aa16.59■□□□□ 0.25
NXF1-216ENST00000533499 UTP15Q8TED0 518 aaKnown RBP16.59■□□□□ 0.25
NXF1-216ENST00000533499 ZDHHC19Q8WVZ1 309 aaPredicted RBP16.59■□□□□ 0.25
NXF1-216ENST00000533499 MS4A6EQ96DS6 147 aa16.59■□□□□ 0.25
NXF1-216ENST00000533499 SERPINI1Q99574 410 aa16.59■□□□□ 0.25
NXF1-216ENST00000533499 SLC6A16Q9GZN6 736 aa16.59■□□□□ 0.25
NXF1-216ENST00000533499 C20orf27Q9GZN8 174 aa16.59■□□□□ 0.25
NXF1-216ENST00000533499 CCDC86Q9H6F5 360 aaKnown RBP16.59■□□□□ 0.25
NXF1-216ENST00000533499 THAP1Q9NVV9 213 aa16.59■□□□□ 0.25
NXF1-216ENST00000533499 MARCOQ9UEW3 520 aaPredicted RBP16.59■□□□□ 0.25
NXF1-216ENST00000533499 CDC14AQ9UNH5 594 aa16.59■□□□□ 0.25
NXF1-216ENST00000533499 RAP2CQ9Y3L5 183 aa16.59■□□□□ 0.25
NXF1-216ENST00000533499 NAALAD2Q9Y3Q0 740 aa16.59■□□□□ 0.25
NXF1-216ENST00000533499 SEC16AO15027 2179 aa16.59■□□□□ 0.25
NXF1-216ENST00000533499 RTCAO00442 366 aaKnown RBP16.58■□□□□ 0.24
NXF1-216ENST00000533499 KLHL18O94889 574 aa16.58■□□□□ 0.24
NXF1-216ENST00000533499 KITP10721 976 aa16.58■□□□□ 0.24
NXF1-216ENST00000533499 FBLP22087 321 aaKnown RBP16.58■□□□□ 0.24
NXF1-216ENST00000533499 CD82P27701 267 aa16.58■□□□□ 0.24
NXF1-216ENST00000533499 SNRPNP63162 240 aaKnown RBP16.58■□□□□ 0.24
NXF1-216ENST00000533499 OLR1P78380 273 aa16.58■□□□□ 0.24
NXF1-216ENST00000533499 DCDP81605 110 aaKnown RBP16.58■□□□□ 0.24
NXF1-216ENST00000533499 SHC2P98077 582 aa16.58■□□□□ 0.24
NXF1-216ENST00000533499 HMGCS1Q01581 520 aa16.58■□□□□ 0.24
NXF1-216ENST00000533499 GALNT1Q10472 559 aaPredicted RBP16.58■□□□□ 0.24
NXF1-216ENST00000533499 HYAL2Q12891 473 aa16.58■□□□□ 0.24
NXF1-216ENST00000533499 HERC3Q15034 1050 aa16.58■□□□□ 0.24
NXF1-216ENST00000533499 PDCD2Q16342 344 aaPredicted RBP16.58■□□□□ 0.24
NXF1-216ENST00000533499 AP5B1Q2VPB7 878 aa16.58■□□□□ 0.24
NXF1-216ENST00000533499 KANK2Q63ZY3 851 aa16.58■□□□□ 0.24
NXF1-216ENST00000533499 IGF2-ASQ6U949 168 aa16.58■□□□□ 0.24
NXF1-216ENST00000533499 TIPARPQ7Z3E1 657 aaKnown RBP16.58■□□□□ 0.24
NXF1-216ENST00000533499 CACNA2D3Q8IZS8 1091 aa16.58■□□□□ 0.24
NXF1-216ENST00000533499 NLGN4XQ8N0W4 816 aa16.58■□□□□ 0.24
NXF1-216ENST00000533499 ESX1Q8N693 406 aa16.58■□□□□ 0.24
NXF1-216ENST00000533499 IL22RA1Q8N6P7 574 aa16.58■□□□□ 0.24
NXF1-216ENST00000533499 NLGN4YQ8NFZ3 816 aaPredicted RBP16.58■□□□□ 0.24
NXF1-216ENST00000533499 OR2L5Q8NG80 312 aa16.58■□□□□ 0.24
NXF1-216ENST00000533499 PROKR1Q8TCW9 393 aa16.58■□□□□ 0.24
NXF1-216ENST00000533499 GAL3ST3Q96A11 431 aa16.58■□□□□ 0.24
NXF1-216ENST00000533499 RGMAQ96B86 450 aa16.58■□□□□ 0.24
NXF1-216ENST00000533499 PPP1R36Q96LQ0 422 aa16.58■□□□□ 0.24
NXF1-216ENST00000533499 SORT1Q99523 831 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms