RNA–Protein interactions for RNA: ENST00000533149.1

TRAPPC4-213, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,340 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-213ENST00000533149 BGNP21810 368 aa10.77□□□□□ -0.69
TRAPPC4-213ENST00000533149 NDUFS1P28331 727 aa10.77□□□□□ -0.69
TRAPPC4-213ENST00000533149 PBLDP30039 288 aaPredicted RBP10.77□□□□□ -0.69
TRAPPC4-213ENST00000533149 PRDX3P30048 256 aaKnown RBP10.77□□□□□ -0.69
TRAPPC4-213ENST00000533149 LSP1P33241 339 aa10.77□□□□□ -0.69
TRAPPC4-213ENST00000533149 BOP1Q14137 746 aaKnown RBP10.77□□□□□ -0.69
TRAPPC4-213ENST00000533149 KRT33BQ14525 404 aa10.77□□□□□ -0.69
TRAPPC4-213ENST00000533149 PCLAFQ15004 111 aa10.77□□□□□ -0.69
TRAPPC4-213ENST00000533149 TSNQ15631 228 aaKnown RBP10.77□□□□□ -0.69
TRAPPC4-213ENST00000533149 PDK4Q16654 411 aa10.77□□□□□ -0.69
TRAPPC4-213ENST00000533149 NKAIN1Q4KMZ8 207 aa10.77□□□□□ -0.69
TRAPPC4-213ENST00000533149 METRNLQ641Q3 311 aa10.77□□□□□ -0.69
TRAPPC4-213ENST00000533149 ZYG11AQ6WRX3 759 aa10.77□□□□□ -0.69
TRAPPC4-213ENST00000533149 VRK3Q8IV63 474 aa10.77□□□□□ -0.69
TRAPPC4-213ENST00000533149 CFAP206Q8IYR0 622 aa10.77□□□□□ -0.69
TRAPPC4-213ENST00000533149 MYO1HQ8N1T3 1032 aa10.77□□□□□ -0.69
TRAPPC4-213ENST00000533149 OR4E2Q8NGC2 313 aa10.77□□□□□ -0.69
TRAPPC4-213ENST00000533149 RHEBL1Q8TAI7 183 aa10.77□□□□□ -0.69
TRAPPC4-213ENST00000533149 STAG3L4Q8TBR4 150 aa10.77□□□□□ -0.69
TRAPPC4-213ENST00000533149 LRRC8CQ8TDW0 803 aa10.77□□□□□ -0.69
TRAPPC4-213ENST00000533149 ASZ1Q8WWH4 475 aa10.77□□□□□ -0.69
TRAPPC4-213ENST00000533149 THOC3Q96J01 351 aaKnown RBP10.77□□□□□ -0.69
TRAPPC4-213ENST00000533149 LINC00615Q96LM1 132 aaPredicted RBP10.77□□□□□ -0.69
TRAPPC4-213ENST00000533149 INSM2Q96T92 566 aaPredicted RBP10.77□□□□□ -0.69
TRAPPC4-213ENST00000533149 FOXC2Q99958 501 aa10.77□□□□□ -0.69
TRAPPC4-213ENST00000533149 NDC1Q9BTX1 674 aa10.77□□□□□ -0.69
TRAPPC4-213ENST00000533149 PITPNM3Q9BZ71 974 aa10.77□□□□□ -0.69
TRAPPC4-213ENST00000533149 CXXC4Q9H2H0 198 aa10.77□□□□□ -0.69
TRAPPC4-213ENST00000533149 CCDC134Q9H6E4 229 aa10.77□□□□□ -0.69
TRAPPC4-213ENST00000533149 MANSC1Q9H8J5 431 aa10.77□□□□□ -0.69
TRAPPC4-213ENST00000533149 TXLNGQ9NUQ3 528 aa10.77□□□□□ -0.69
TRAPPC4-213ENST00000533149 FAM8A1Q9UBU6 413 aa10.77□□□□□ -0.69
TRAPPC4-213ENST00000533149 CDYLQ9Y232 598 aa10.77□□□□□ -0.69
TRAPPC4-213ENST00000533149 CFAP20Q9Y6A4 193 aaKnown RBP10.77□□□□□ -0.69
TRAPPC4-213ENST00000533149 NIPBLQ6KC79 2804 aaeCLIP10.77□□□□□ -0.69
TRAPPC4-213ENST00000533149 SEC16AO15027 2179 aa10.76□□□□□ -0.69
TRAPPC4-213ENST00000533149 SPTBP11277 2137 aa10.76□□□□□ -0.69
TRAPPC4-213ENST00000533149 C17orf113A0A1B0GUU1 675 aa10.76□□□□□ -0.69
TRAPPC4-213ENST00000533149 SLC5A10A0PJK1 596 aa10.76□□□□□ -0.69
TRAPPC4-213ENST00000533149 GMNCA6NCL1 334 aa10.76□□□□□ -0.69
TRAPPC4-213ENST00000533149 NPEPPSL1A6NEC2 478 aa10.76□□□□□ -0.69
TRAPPC4-213ENST00000533149 MGAT4DA6NG13 374 aa10.76□□□□□ -0.69
TRAPPC4-213ENST00000533149 EIF3FO00303 357 aaPredicted RBP10.76□□□□□ -0.69
TRAPPC4-213ENST00000533149 BTN3A1O00481 513 aa10.76□□□□□ -0.69
TRAPPC4-213ENST00000533149 CNOT3O75175 753 aaKnown RBP10.76□□□□□ -0.69
TRAPPC4-213ENST00000533149 ALOX12BO75342 701 aa10.76□□□□□ -0.69
TRAPPC4-213ENST00000533149 SLCO2B1O94956 709 aa10.76□□□□□ -0.69
TRAPPC4-213ENST00000533149 GSTM1P09488 218 aa10.76□□□□□ -0.69
TRAPPC4-213ENST00000533149 MPC1LP0DKB6 136 aa10.76□□□□□ -0.69
TRAPPC4-213ENST00000533149 ENO3P13929 434 aaPredicted RBP10.76□□□□□ -0.69
TRAPPC4-213ENST00000533149 ATP5F1P24539 256 aaPredicted RBP10.76□□□□□ -0.69
TRAPPC4-213ENST00000533149 TNFSF10P50591 281 aa10.76□□□□□ -0.69
TRAPPC4-213ENST00000533149 SEC24CP53992 1094 aa10.76□□□□□ -0.69
TRAPPC4-213ENST00000533149 GSTM4Q03013 218 aa10.76□□□□□ -0.69
TRAPPC4-213ENST00000533149 NFE2L1Q14494 772 aa10.76□□□□□ -0.69
TRAPPC4-213ENST00000533149 CDSNQ15517 529 aa10.76□□□□□ -0.69
TRAPPC4-213ENST00000533149 CHI3L2Q15782 390 aa10.76□□□□□ -0.69
TRAPPC4-213ENST00000533149 ZNF658BQ4V348 819 aaPredicted RBP10.76□□□□□ -0.69
TRAPPC4-213ENST00000533149 FAM83HQ6ZRV2 1179 aaPredicted RBP10.76□□□□□ -0.69
TRAPPC4-213ENST00000533149 GPSM1Q86YR5 675 aa10.76□□□□□ -0.69
TRAPPC4-213ENST00000533149 TRIM42Q8IWZ5 723 aa10.76□□□□□ -0.69
TRAPPC4-213ENST00000533149 LILRA3Q8N6C8 439 aaPredicted RBP10.76□□□□□ -0.69
TRAPPC4-213ENST00000533149 OR2L2Q8NH16 312 aa10.76□□□□□ -0.69
TRAPPC4-213ENST00000533149 ADAMTS18Q8TE60 1221 aa10.76□□□□□ -0.69
TRAPPC4-213ENST00000533149 C12orf66Q96MD2 445 aa10.76□□□□□ -0.69
TRAPPC4-213ENST00000533149 ATOH8Q96SQ7 321 aa10.76□□□□□ -0.69
TRAPPC4-213ENST00000533149 TREX2Q9BQ50 279 aaPredicted RBP10.76□□□□□ -0.69
TRAPPC4-213ENST00000533149 SRMSQ9H3Y6 488 aa10.76□□□□□ -0.69
TRAPPC4-213ENST00000533149 SEMA3GQ9NS98 782 aa10.76□□□□□ -0.69
TRAPPC4-213ENST00000533149 OXSMQ9NWU1 459 aa10.76□□□□□ -0.69
TRAPPC4-213ENST00000533149 TNFRSF10DQ9UBN6 386 aa10.76□□□□□ -0.69
TRAPPC4-213ENST00000533149 ACSL5Q9ULC5 683 aa10.76□□□□□ -0.69
TRAPPC4-213ENST00000533149 RNF112Q9ULX5 631 aa10.76□□□□□ -0.69
TRAPPC4-213ENST00000533149 CCDC189A1A4V9 331 aa10.75□□□□□ -0.69
TRAPPC4-213ENST00000533149 KLHL33A6NCF5 533 aa10.75□□□□□ -0.69
TRAPPC4-213ENST00000533149 UBXN8O00124 270 aa10.75□□□□□ -0.69
TRAPPC4-213ENST00000533149 SOCS6O14544 535 aa10.75□□□□□ -0.69
TRAPPC4-213ENST00000533149 LIN7AO14910 233 aaPredicted RBP10.75□□□□□ -0.69
TRAPPC4-213ENST00000533149 TRIM13O60858 407 aa10.75□□□□□ -0.69
TRAPPC4-213ENST00000533149 KERAO60938 352 aa10.75□□□□□ -0.69
TRAPPC4-213ENST00000533149 SMIM24O75264 130 aa10.75□□□□□ -0.69
TRAPPC4-213ENST00000533149 KLHL18O94889 574 aa10.75□□□□□ -0.69
TRAPPC4-213ENST00000533149 RASAL1O95294 804 aa10.75□□□□□ -0.69
TRAPPC4-213ENST00000533149 VIMP08670 466 aaKnown RBP10.75□□□□□ -0.69
TRAPPC4-213ENST00000533149 TPBGLP0DKB5 382 aa10.75□□□□□ -0.69
TRAPPC4-213ENST00000533149 MST1P26927 711 aa10.75□□□□□ -0.69
TRAPPC4-213ENST00000533149 DNAJA1P31689 397 aaKnown RBP10.75□□□□□ -0.69
TRAPPC4-213ENST00000533149 FOXL2P58012 376 aa10.75□□□□□ -0.69
TRAPPC4-213ENST00000533149 STX3Q13277 289 aa10.75□□□□□ -0.69
TRAPPC4-213ENST00000533149 SLC9A5Q14940 896 aa10.75□□□□□ -0.69
TRAPPC4-213ENST00000533149 C3AR1Q16581 482 aa10.75□□□□□ -0.69
TRAPPC4-213ENST00000533149 SYTL3Q4VX76 610 aa10.75□□□□□ -0.69
TRAPPC4-213ENST00000533149 TLDC1Q6P9B6 456 aa10.75□□□□□ -0.69
TRAPPC4-213ENST00000533149 KIRREL2Q6UWL6 708 aa10.75□□□□□ -0.69
TRAPPC4-213ENST00000533149 RGS9BPQ6ZS82 235 aa10.75□□□□□ -0.69
TRAPPC4-213ENST00000533149 NEK10Q6ZWH5 1172 aa10.75□□□□□ -0.69
TRAPPC4-213ENST00000533149 LRRC34Q8IZ02 419 aa10.75□□□□□ -0.69
TRAPPC4-213ENST00000533149 PPP1R14CQ8TAE6 165 aa10.75□□□□□ -0.69
TRAPPC4-213ENST00000533149 LCN9Q8WX39 176 aa10.75□□□□□ -0.69
TRAPPC4-213ENST00000533149 HAS2Q92819 552 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms