RNA–Protein interactions for RNA: ENST00000533058.5

TRAPPC4-212, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2 BASIC

Gene TRAPPC4, Length 1,209 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-212ENST00000533058 CDC14AQ9UNH5 594 aa12.31□□□□□ -0.44
TRAPPC4-212ENST00000533058 IGLV3-12A0A075B6K2 115 aa12.3□□□□□ -0.44
TRAPPC4-212ENST00000533058 TRBC2A0A5B9 178 aa12.3□□□□□ -0.44
TRAPPC4-212ENST00000533058 G3V2L1 256 aa12.3□□□□□ -0.44
TRAPPC4-212ENST00000533058 AGPSO00116 658 aa12.3□□□□□ -0.44
TRAPPC4-212ENST00000533058 STATHP02808 62 aa12.3□□□□□ -0.44
TRAPPC4-212ENST00000533058 UMODP07911 640 aa12.3□□□□□ -0.44
TRAPPC4-212ENST00000533058 NEFHP12036 1026 aa12.3□□□□□ -0.44
TRAPPC4-212ENST00000533058 TSPAN8P19075 237 aa12.3□□□□□ -0.44
TRAPPC4-212ENST00000533058 MMP11P24347 488 aa12.3□□□□□ -0.44
TRAPPC4-212ENST00000533058 CXCR2P25025 360 aa12.3□□□□□ -0.44
TRAPPC4-212ENST00000533058 CASRP41180 1078 aa12.3□□□□□ -0.44
TRAPPC4-212ENST00000533058 CCNG1P51959 295 aa12.3□□□□□ -0.44
TRAPPC4-212ENST00000533058 REEP5Q00765 189 aa12.3□□□□□ -0.44
TRAPPC4-212ENST00000533058 ASPHQ12797 758 aa12.3□□□□□ -0.44
TRAPPC4-212ENST00000533058 KLRB1Q12918 225 aa12.3□□□□□ -0.44
TRAPPC4-212ENST00000533058 FAM53BQ14153 422 aa12.3□□□□□ -0.44
TRAPPC4-212ENST00000533058 TNFAIP8L3Q5GJ75 292 aa12.3□□□□□ -0.44
TRAPPC4-212ENST00000533058 PAGE2BQ5JRK9 111 aa12.3□□□□□ -0.44
TRAPPC4-212ENST00000533058 FAM69BQ5VUD6 431 aa12.3□□□□□ -0.44
TRAPPC4-212ENST00000533058 ATG9BQ674R7 924 aa12.3□□□□□ -0.44
TRAPPC4-212ENST00000533058 METTL2BQ6P1Q9 378 aaKnown RBP12.3□□□□□ -0.44
TRAPPC4-212ENST00000533058 SLCO4C1Q6ZQN7 724 aa12.3□□□□□ -0.44
TRAPPC4-212ENST00000533058 RPS27LQ71UM5 84 aaKnown RBP12.3□□□□□ -0.44
TRAPPC4-212ENST00000533058 COX15Q7KZN9 410 aa12.3□□□□□ -0.44
TRAPPC4-212ENST00000533058 HPS6Q86YV9 775 aa12.3□□□□□ -0.44
TRAPPC4-212ENST00000533058 C10orf107Q8IVU9 208 aa12.3□□□□□ -0.44
TRAPPC4-212ENST00000533058 ARHGEF39Q8N4T4 335 aa12.3□□□□□ -0.44
TRAPPC4-212ENST00000533058 CSNK1A1LQ8N752 337 aa12.3□□□□□ -0.44
TRAPPC4-212ENST00000533058 PPP1R14CQ8TAE6 165 aa12.3□□□□□ -0.44
TRAPPC4-212ENST00000533058 CCT6BQ92526 530 aa12.3□□□□□ -0.44
TRAPPC4-212ENST00000533058 ARL8AQ96BM9 186 aa12.3□□□□□ -0.44
TRAPPC4-212ENST00000533058 PTCD3Q96EY7 689 aaKnown RBP12.3□□□□□ -0.44
TRAPPC4-212ENST00000533058 C10orf90Q96M02 699 aa12.3□□□□□ -0.44
TRAPPC4-212ENST00000533058 NSUN5Q96P11 429 aaKnown RBP12.3□□□□□ -0.44
TRAPPC4-212ENST00000533058 TMEM237Q96Q45 408 aa12.3□□□□□ -0.44
TRAPPC4-212ENST00000533058 SPSB2Q99619 263 aa12.3□□□□□ -0.44
TRAPPC4-212ENST00000533058 SARGQ9BW04 601 aa12.3□□□□□ -0.44
TRAPPC4-212ENST00000533058 DRC3Q9H069 523 aa12.3□□□□□ -0.44
TRAPPC4-212ENST00000533058 NOL11Q9H8H0 719 aaKnown RBP12.3□□□□□ -0.44
TRAPPC4-212ENST00000533058 ZNF304Q9HCX3 659 aa12.3□□□□□ -0.44
TRAPPC4-212ENST00000533058 SSU72Q9NP77 194 aaKnown RBP12.3□□□□□ -0.44
TRAPPC4-212ENST00000533058 NKIRAS1Q9NYS0 192 aa12.3□□□□□ -0.44
TRAPPC4-212ENST00000533058 COPG2Q9UBF2 871 aa12.3□□□□□ -0.44
TRAPPC4-212ENST00000533058 PCTPQ9UKL6 214 aa12.3□□□□□ -0.44
TRAPPC4-212ENST00000533058 TP53TG5Q9Y2B4 290 aa12.3□□□□□ -0.44
TRAPPC4-212ENST00000533058 FER1L5A0AVI2 2057 aa12.3□□□□□ -0.44
TRAPPC4-212ENST00000533058 PCM1Q15154 2024 aa12.29□□□□□ -0.44
TRAPPC4-212ENST00000533058 PEX12O00623 359 aa12.29□□□□□ -0.44
TRAPPC4-212ENST00000533058 E2F3O00716 465 aa12.29□□□□□ -0.44
TRAPPC4-212ENST00000533058 TM9SF1O15321 606 aa12.29□□□□□ -0.44
TRAPPC4-212ENST00000533058 PRPF4O43172 522 aaKnown RBP eCLIP12.29□□□□□ -0.442e-7■■■■□ 24.1
TRAPPC4-212ENST00000533058 TYROBPO43914 113 aa12.29□□□□□ -0.44
TRAPPC4-212ENST00000533058 KLHL41O60662 606 aa12.29□□□□□ -0.44
TRAPPC4-212ENST00000533058 DNAJB5O75953 348 aa12.29□□□□□ -0.44
TRAPPC4-212ENST00000533058 SASH3O75995 380 aa12.29□□□□□ -0.44
TRAPPC4-212ENST00000533058 ZWINTO95229 277 aa12.29□□□□□ -0.44
TRAPPC4-212ENST00000533058 MED26O95402 600 aa12.29□□□□□ -0.44
TRAPPC4-212ENST00000533058 RPS17P08708 135 aaKnown RBP12.29□□□□□ -0.44
TRAPPC4-212ENST00000533058 PCNAP12004 261 aa12.29□□□□□ -0.44
TRAPPC4-212ENST00000533058 IMPDH1P20839 514 aa12.29□□□□□ -0.44
TRAPPC4-212ENST00000533058 HPDP32754 393 aaPredicted RBP12.29□□□□□ -0.44
TRAPPC4-212ENST00000533058 BCL6P41182 706 aa12.29□□□□□ -0.44
TRAPPC4-212ENST00000533058 CCL11P51671 97 aa12.29□□□□□ -0.44
TRAPPC4-212ENST00000533058 CDH13P55290 713 aa12.29□□□□□ -0.44
TRAPPC4-212ENST00000533058 LAPTM5Q13571 262 aa12.29□□□□□ -0.44
TRAPPC4-212ENST00000533058 ATP1A4Q13733 1029 aa12.29□□□□□ -0.44
TRAPPC4-212ENST00000533058 DOC2AQ14183 400 aa12.29□□□□□ -0.44
TRAPPC4-212ENST00000533058 SLC9A5Q14940 896 aa12.29□□□□□ -0.44
TRAPPC4-212ENST00000533058 UNC50Q53HI1 259 aa12.29□□□□□ -0.44
TRAPPC4-212ENST00000533058 DCAF10Q5QP82 559 aa12.29□□□□□ -0.44
TRAPPC4-212ENST00000533058 ZNF678Q5SXM1 525 aa12.29□□□□□ -0.44
TRAPPC4-212ENST00000533058 HHATQ5VTY9 493 aa12.29□□□□□ -0.44
TRAPPC4-212ENST00000533058 CPZQ66K79 652 aa12.29□□□□□ -0.44
TRAPPC4-212ENST00000533058 ASB18Q6ZVZ8 466 aa12.29□□□□□ -0.44
TRAPPC4-212ENST00000533058 PPP1R32Q7Z5V6 425 aa12.29□□□□□ -0.44
TRAPPC4-212ENST00000533058 MFSD9Q8NBP5 474 aa12.29□□□□□ -0.44
TRAPPC4-212ENST00000533058 ZNF740Q8NDX6 193 aa12.29□□□□□ -0.44
TRAPPC4-212ENST00000533058 MGARPQ8TDB4 240 aa12.29□□□□□ -0.44
TRAPPC4-212ENST00000533058 TRPC4APQ8TEL6 797 aa12.29□□□□□ -0.44
TRAPPC4-212ENST00000533058 ZNF483Q8TF39 744 aaPredicted RBP12.29□□□□□ -0.44
TRAPPC4-212ENST00000533058 TLCD1Q96CP7 247 aa12.29□□□□□ -0.44
TRAPPC4-212ENST00000533058 ATP6V1G3Q96LB4 118 aa12.29□□□□□ -0.44
TRAPPC4-212ENST00000533058 EFCAB11Q9BUY7 163 aa12.29□□□□□ -0.44
TRAPPC4-212ENST00000533058 SLC25A23Q9BV35 468 aa12.29□□□□□ -0.44
TRAPPC4-212ENST00000533058 EHD1Q9H4M9 534 aa12.29□□□□□ -0.44
TRAPPC4-212ENST00000533058 SYNPO2LQ9H987 977 aa12.29□□□□□ -0.44
TRAPPC4-212ENST00000533058 SEMA3GQ9NS98 782 aa12.29□□□□□ -0.44
TRAPPC4-212ENST00000533058 P4HTMQ9NXG6 502 aa12.29□□□□□ -0.44
TRAPPC4-212ENST00000533058 ZNF282Q9UDV7 671 aaPredicted RBP12.29□□□□□ -0.44
TRAPPC4-212ENST00000533058 G3BP2Q9UN86 482 aaKnown RBP12.29□□□□□ -0.44
TRAPPC4-212ENST00000533058 RUVBL1Q9Y265 456 aaKnown RBP12.29□□□□□ -0.44
TRAPPC4-212ENST00000533058 TMEM120BA0PK00 339 aa12.28□□□□□ -0.44
TRAPPC4-212ENST00000533058 WDR91A4D1P6 747 aa12.28□□□□□ -0.44
TRAPPC4-212ENST00000533058 K7EM74 188 aa12.28□□□□□ -0.44
TRAPPC4-212ENST00000533058 LCMT2O60294 686 aaKnown RBP12.28□□□□□ -0.44
TRAPPC4-212ENST00000533058 MLYCDO95822 493 aa12.28□□□□□ -0.44
TRAPPC4-212ENST00000533058 OTCP00480 354 aa12.28□□□□□ -0.44
TRAPPC4-212ENST00000533058 EPORP19235 508 aa12.28□□□□□ -0.44
TRAPPC4-212ENST00000533058 ALDH3A1P30838 453 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms