RNA–Protein interactions for RNA: ENST00000532700.6

SMG1-203, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-203ENST00000532700 CDKL1Q00532 357 aa16.77■□□□□ 0.28
SMG1-203ENST00000532700 KBTBD12Q3ZCT8 623 aa16.77■□□□□ 0.28
SMG1-203ENST00000532700 SLCO4C1Q6ZQN7 724 aa16.77■□□□□ 0.28
SMG1-203ENST00000532700 VN1R5Q7Z5H4 357 aa16.77■□□□□ 0.28
SMG1-203ENST00000532700 CMC1Q7Z7K0 106 aa16.77■□□□□ 0.28
SMG1-203ENST00000532700 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.77■□□□□ 0.28
SMG1-203ENST00000532700 NOA1Q8NC60 698 aaKnown RBP16.77■□□□□ 0.28
SMG1-203ENST00000532700 OR1N1Q8NGS0 311 aa16.77■□□□□ 0.28
SMG1-203ENST00000532700 ATL1Q8WXF7 558 aa16.77■□□□□ 0.28
SMG1-203ENST00000532700 LMF1Q96S06 567 aa16.77■□□□□ 0.28
SMG1-203ENST00000532700 EGFL8Q99944 293 aa16.77■□□□□ 0.28
SMG1-203ENST00000532700 SLC6A16Q9GZN6 736 aa16.77■□□□□ 0.28
SMG1-203ENST00000532700 DERL2Q9GZP9 239 aa16.77■□□□□ 0.28
SMG1-203ENST00000532700 PELI2Q9HAT8 420 aa16.77■□□□□ 0.28
SMG1-203ENST00000532700 ZFP69BQ9UJL9 534 aa16.77■□□□□ 0.28
SMG1-203ENST00000532700 A0A0G2JN53 185 aa16.76■□□□□ 0.27
SMG1-203ENST00000532700 A1L4Q6 167 aa16.76■□□□□ 0.27
SMG1-203ENST00000532700 ANKUB1A6NFN9 424 aa16.76■□□□□ 0.27
SMG1-203ENST00000532700 FAM227AF5H4B4 570 aa16.76■□□□□ 0.27
SMG1-203ENST00000532700 KLHL41O60662 606 aa16.76■□□□□ 0.27
SMG1-203ENST00000532700 WDR47O94967 919 aa16.76■□□□□ 0.27
SMG1-203ENST00000532700 CCDC166P0CW27 439 aa16.76■□□□□ 0.27
SMG1-203ENST00000532700 SMIM10L1P0DMW3 83 aa16.76■□□□□ 0.27
SMG1-203ENST00000532700 GP1BBP13224 206 aa16.76■□□□□ 0.27
SMG1-203ENST00000532700 CD1DP15813 335 aa16.76■□□□□ 0.27
SMG1-203ENST00000532700 ALOX12P18054 663 aa16.76■□□□□ 0.27
SMG1-203ENST00000532700 EPORP19235 508 aa16.76■□□□□ 0.27
SMG1-203ENST00000532700 CD22P20273 847 aa16.76■□□□□ 0.27
SMG1-203ENST00000532700 HNRNPH1P31943 449 aaKnown RBP16.76■□□□□ 0.27
SMG1-203ENST00000532700 GRK3P35626 688 aa16.76■□□□□ 0.27
SMG1-203ENST00000532700 TNFSF10P50591 281 aa16.76■□□□□ 0.27
SMG1-203ENST00000532700 BTG2P78543 158 aa16.76■□□□□ 0.27
SMG1-203ENST00000532700 PWP1Q13610 501 aa16.76■□□□□ 0.27
SMG1-203ENST00000532700 ABRAXAS2Q15018 415 aa16.76■□□□□ 0.27
SMG1-203ENST00000532700 TGFBIQ15582 683 aa16.76■□□□□ 0.27
SMG1-203ENST00000532700 ZKSCAN8Q15776 578 aaPredicted RBP16.76■□□□□ 0.27
SMG1-203ENST00000532700 SFT2D3Q587I9 215 aa16.76■□□□□ 0.27
SMG1-203ENST00000532700 CEP128Q6ZU80 1094 aa16.76■□□□□ 0.27
SMG1-203ENST00000532700 CCDC25Q86WR0 208 aa16.76■□□□□ 0.27
SMG1-203ENST00000532700 KLHDC8AQ8IYD2 350 aa16.76■□□□□ 0.27
SMG1-203ENST00000532700 SSC4DQ8WTU2 575 aa16.76■□□□□ 0.27
SMG1-203ENST00000532700 ANKRD7Q92527 254 aa16.76■□□□□ 0.27
SMG1-203ENST00000532700 SMIM10Q96HG1 83 aa16.76■□□□□ 0.27
SMG1-203ENST00000532700 TUBB6Q9BUF5 446 aa16.76■□□□□ 0.27
SMG1-203ENST00000532700 SLC29A3Q9BZD2 475 aa16.76■□□□□ 0.27
SMG1-203ENST00000532700 POPDC3Q9HBV1 291 aa16.76■□□□□ 0.27
SMG1-203ENST00000532700 LRRC4CQ9HCJ2 640 aa16.76■□□□□ 0.27
SMG1-203ENST00000532700 DYRK1BQ9Y463 629 aa16.76■□□□□ 0.27
SMG1-203ENST00000532700 CNTRLQ7Z7A1 2325 aa16.76■□□□□ 0.27
SMG1-203ENST00000532700 ARG2P78540 354 aa16.75■□□□□ 0.27
SMG1-203ENST00000532700 PMP22Q01453 160 aa16.75■□□□□ 0.27
SMG1-203ENST00000532700 POU4F1Q01851 419 aa16.75■□□□□ 0.27
SMG1-203ENST00000532700 USP10Q14694 798 aaKnown RBP16.75■□□□□ 0.27
SMG1-203ENST00000532700 RBBP5Q15291 538 aaKnown RBP16.75■□□□□ 0.27
SMG1-203ENST00000532700 TLR1Q15399 786 aa16.75■□□□□ 0.27
SMG1-203ENST00000532700 BTBD16Q32M84 506 aa16.75■□□□□ 0.27
SMG1-203ENST00000532700 TOR1AIP1Q5JTV8 583 aa16.75■□□□□ 0.27
SMG1-203ENST00000532700 RIPOR1Q6ZS17 1223 aa16.75■□□□□ 0.27
SMG1-203ENST00000532700 C3orf62Q6ZUJ4 267 aa16.75■□□□□ 0.27
SMG1-203ENST00000532700 ADAMTSL2Q86TH1 951 aa16.75■□□□□ 0.27
SMG1-203ENST00000532700 KIF2BQ8N4N8 673 aa16.75■□□□□ 0.27
SMG1-203ENST00000532700 VPS50Q96JG6 964 aa16.75■□□□□ 0.27
SMG1-203ENST00000532700 MAGEB10Q96LZ2 347 aaPredicted RBP16.75■□□□□ 0.27
SMG1-203ENST00000532700 CPNE1Q99829 537 aa16.75■□□□□ 0.27
SMG1-203ENST00000532700 MTRF1LQ9UGC7 380 aaKnown RBP16.75■□□□□ 0.27
SMG1-203ENST00000532700 SPTAN1Q13813 2472 aaKnown RBP16.75■□□□□ 0.27
SMG1-203ENST00000532700 HMX2A2RU54 273 aa16.74■□□□□ 0.27
SMG1-203ENST00000532700 PABPN1LA6NDY0 278 aaKnown RBP16.74■□□□□ 0.27
SMG1-203ENST00000532700 TGFBR3LH3BV60 316 aa16.74■□□□□ 0.27
SMG1-203ENST00000532700 ZNF500O60304 480 aaPredicted RBP16.74■□□□□ 0.27
SMG1-203ENST00000532700 B4GALT2O60909 372 aa16.74■□□□□ 0.27
SMG1-203ENST00000532700 WFS1O76024 890 aa16.74■□□□□ 0.27
SMG1-203ENST00000532700 CLDN1O95832 211 aa16.74■□□□□ 0.27
SMG1-203ENST00000532700 LDLRP01130 860 aa16.74■□□□□ 0.27
SMG1-203ENST00000532700 FHP07954 510 aa16.74■□□□□ 0.27
SMG1-203ENST00000532700 GSTA2P09210 222 aa16.74■□□□□ 0.27
SMG1-203ENST00000532700 MAOAP21397 527 aa16.74■□□□□ 0.27
SMG1-203ENST00000532700 AHRP35869 848 aa16.74■□□□□ 0.27
SMG1-203ENST00000532700 MAGEA4P43358 317 aa16.74■□□□□ 0.27
SMG1-203ENST00000532700 HSPA7P48741 367 aa16.74■□□□□ 0.27
SMG1-203ENST00000532700 TDGF1P3P51864 188 aa16.74■□□□□ 0.27
SMG1-203ENST00000532700 ZNF33BQ06732 778 aa16.74■□□□□ 0.27
SMG1-203ENST00000532700 SLBPQ14493 270 aaKnown RBP eCLIP16.74■□□□□ 0.27
SMG1-203ENST00000532700 HERC3Q15034 1050 aa16.74■□□□□ 0.27
SMG1-203ENST00000532700 ZNF324BQ6AW86 544 aaPredicted RBP16.74■□□□□ 0.27
SMG1-203ENST00000532700 PLAG1Q6DJT9 500 aa16.74■□□□□ 0.27
SMG1-203ENST00000532700 PAPD4Q6PIY7 484 aaKnown RBP16.74■□□□□ 0.27
SMG1-203ENST00000532700 FRA10AC1Q70Z53 315 aa16.74■□□□□ 0.27
SMG1-203ENST00000532700 BEST3Q8N1M1 668 aa16.74■□□□□ 0.27
SMG1-203ENST00000532700 TMEM52Q8NDY8 209 aa16.74■□□□□ 0.27
SMG1-203ENST00000532700 FBF1Q8TES7 1133 aa16.74■□□□□ 0.27
SMG1-203ENST00000532700 FAR1Q8WVX9 515 aa16.74■□□□□ 0.27
SMG1-203ENST00000532700 METTL21AQ8WXB1 218 aa16.74■□□□□ 0.27
SMG1-203ENST00000532700 HAS2Q92819 552 aa16.74■□□□□ 0.27
SMG1-203ENST00000532700 EXT2Q93063 718 aa16.74■□□□□ 0.27
SMG1-203ENST00000532700 UBXN10Q96LJ8 280 aa16.74■□□□□ 0.27
SMG1-203ENST00000532700 SLX1AQ9BQ83 275 aa16.74■□□□□ 0.27
SMG1-203ENST00000532700 HES7Q9BYE0 225 aa16.74■□□□□ 0.27
SMG1-203ENST00000532700 TSPYL1Q9H0U9 437 aa16.74■□□□□ 0.27
SMG1-203ENST00000532700 ZDHHC18Q9NUE0 388 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms