RNA–Protein interactions for RNA: ENST00000532566.3

PCDHA3-202, Transcript of protocadherin alpha 3, humanhuman

BASIC

Gene PCDHA3, Length 4,594 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-202ENST00000532566 KCNN2Q9H2S1 579 aa14.78□□□□□ -0.04
PCDHA3-202ENST00000532566 TBC1D17Q9HA65 648 aa14.78□□□□□ -0.04
PCDHA3-202ENST00000532566 TRIM39Q9HCM9 518 aa14.78□□□□□ -0.04
PCDHA3-202ENST00000532566 TMEM181Q9P2C4 612 aa14.78□□□□□ -0.04
PCDHA3-202ENST00000532566 IKZF2Q9UKS7 526 aa14.78□□□□□ -0.04
PCDHA3-202ENST00000532566 GGT1P19440 569 aa14.77□□□□□ -0.04
PCDHA3-202ENST00000532566 CYP4V2Q6ZWL3 525 aaPredicted RBP14.77□□□□□ -0.04
PCDHA3-202ENST00000532566 ABHD13Q7L211 337 aa14.77□□□□□ -0.04
PCDHA3-202ENST00000532566 IQCHQ86VS3 1027 aa14.77□□□□□ -0.04
PCDHA3-202ENST00000532566 PIK3R3Q92569 461 aa14.77□□□□□ -0.04
PCDHA3-202ENST00000532566 ZNF689Q96CS4 500 aaPredicted RBP14.77□□□□□ -0.04
PCDHA3-202ENST00000532566 SGIP1Q9BQI5 828 aa14.77□□□□□ -0.04
PCDHA3-202ENST00000532566 IL23AQ9NPF7 189 aa14.77□□□□□ -0.04
PCDHA3-202ENST00000532566 SNTG1Q9NSN8 517 aa14.77□□□□□ -0.04
PCDHA3-202ENST00000532566 HCSTQ9UBK5 93 aa14.77□□□□□ -0.04
PCDHA3-202ENST00000532566 SPIN1Q9Y657 262 aaPredicted RBP14.77□□□□□ -0.04
PCDHA3-202ENST00000532566 HCN1O60741 890 aa14.77□□□□□ -0.04
PCDHA3-202ENST00000532566 HOXD9P28356 352 aaPredicted RBP14.77□□□□□ -0.04
PCDHA3-202ENST00000532566 HOXC13P31276 330 aa14.77□□□□□ -0.04
PCDHA3-202ENST00000532566 PSMD4P55036 377 aaKnown RBP14.77□□□□□ -0.04
PCDHA3-202ENST00000532566 RCAN2Q14206 197 aa14.77□□□□□ -0.04
PCDHA3-202ENST00000532566 GRM2Q14416 872 aa14.77□□□□□ -0.04
PCDHA3-202ENST00000532566 PON2Q15165 354 aa14.77□□□□□ -0.04
PCDHA3-202ENST00000532566 SMU1Q2TAY7 513 aa14.77□□□□□ -0.04
PCDHA3-202ENST00000532566 ITPRIPL2Q3MIP1 535 aa14.77□□□□□ -0.04
PCDHA3-202ENST00000532566 HMGB4Q8WW32 186 aa14.77□□□□□ -0.04
PCDHA3-202ENST00000532566 TRMT2BQ96GJ1 504 aaKnown RBP14.77□□□□□ -0.04
PCDHA3-202ENST00000532566 IFT27Q9BW83 186 aa14.77□□□□□ -0.04
PCDHA3-202ENST00000532566 PHF11Q9UIL8 331 aa14.77□□□□□ -0.04
PCDHA3-202ENST00000532566 KIAA0100Q14667 2235 aaKnown RBP14.77□□□□□ -0.04
PCDHA3-202ENST00000532566 PLOD3O60568 738 aa14.77□□□□□ -0.05
PCDHA3-202ENST00000532566 PRAMEF12O95522 483 aa14.77□□□□□ -0.05
PCDHA3-202ENST00000532566 ADH1BP00325 375 aa14.77□□□□□ -0.05
PCDHA3-202ENST00000532566 PFKLP17858 780 aa14.77□□□□□ -0.05
PCDHA3-202ENST00000532566 OR1E2P47887 323 aa14.77□□□□□ -0.05
PCDHA3-202ENST00000532566 GPR68Q15743 365 aa14.77□□□□□ -0.05
PCDHA3-202ENST00000532566 CTC1Q2NKJ3 1217 aa14.77□□□□□ -0.05
PCDHA3-202ENST00000532566 METTL2BQ6P1Q9 378 aaKnown RBP14.77□□□□□ -0.05
PCDHA3-202ENST00000532566 XKR5Q6UX68 686 aa14.77□□□□□ -0.05
PCDHA3-202ENST00000532566 JAZF1Q86VZ6 243 aa14.77□□□□□ -0.05
PCDHA3-202ENST00000532566 RAB43Q86YS6 212 aa14.77□□□□□ -0.05
PCDHA3-202ENST00000532566 C12orf76Q8N812 135 aaPredicted RBP14.77□□□□□ -0.05
PCDHA3-202ENST00000532566 ISOC1Q96CN7 298 aa14.77□□□□□ -0.05
PCDHA3-202ENST00000532566 C3orf30Q96M34 536 aa14.77□□□□□ -0.05
PCDHA3-202ENST00000532566 RTP3Q9BQQ7 232 aa14.77□□□□□ -0.05
PCDHA3-202ENST00000532566 DOHHQ9BU89 302 aa14.77□□□□□ -0.05
PCDHA3-202ENST00000532566 RNF38Q9H0F5 515 aa14.77□□□□□ -0.05
PCDHA3-202ENST00000532566 NECTIN3Q9NQS3 549 aa14.77□□□□□ -0.05
PCDHA3-202ENST00000532566 COL4A1P02462 1669 aa14.77□□□□□ -0.05
PCDHA3-202ENST00000532566 TNFRSF10BO14763 440 aa14.76□□□□□ -0.05
PCDHA3-202ENST00000532566 IL3P08700 152 aa14.76□□□□□ -0.05
PCDHA3-202ENST00000532566 UQCRC2P22695 453 aa14.76□□□□□ -0.05
PCDHA3-202ENST00000532566 ADAM17P78536 824 aa14.76□□□□□ -0.05
PCDHA3-202ENST00000532566 LRP8Q14114 963 aa14.76□□□□□ -0.05
PCDHA3-202ENST00000532566 TLDC1Q6P9B6 456 aa14.76□□□□□ -0.05
PCDHA3-202ENST00000532566 POMZP3Q6PJE2 187 aa14.76□□□□□ -0.05
PCDHA3-202ENST00000532566 NRSN1Q8IZ57 195 aa14.76□□□□□ -0.05
PCDHA3-202ENST00000532566 GPR26Q8NDV2 337 aa14.76□□□□□ -0.05
PCDHA3-202ENST00000532566 HUS1BQ8NHY5 278 aa14.76□□□□□ -0.05
PCDHA3-202ENST00000532566 TMEM125Q96AQ2 219 aa14.76□□□□□ -0.05
PCDHA3-202ENST00000532566 MROH6A6NGR9 719 aa14.76□□□□□ -0.05
PCDHA3-202ENST00000532566 ARHGEF15O94989 841 aa14.76□□□□□ -0.05
PCDHA3-202ENST00000532566 CSTF2P33240 577 aaKnown RBP eCLIP14.76□□□□□ -0.05
PCDHA3-202ENST00000532566 SMSP52788 366 aa14.76□□□□□ -0.05
PCDHA3-202ENST00000532566 CLEC12AQ5QGZ9 265 aa14.76□□□□□ -0.05
PCDHA3-202ENST00000532566 NADSYN1Q6IA69 706 aa14.76□□□□□ -0.05
PCDHA3-202ENST00000532566 LRRC17Q8N6Y2 441 aa14.76□□□□□ -0.05
PCDHA3-202ENST00000532566 OR10H4Q8NGA5 316 aa14.76□□□□□ -0.05
PCDHA3-202ENST00000532566 OR5P2Q8WZ92 322 aa14.76□□□□□ -0.05
PCDHA3-202ENST00000532566 BTBD1Q9H0C5 482 aa14.76□□□□□ -0.05
PCDHA3-202ENST00000532566 CPSF4LA6NMK7 179 aaKnown RBP14.76□□□□□ -0.05
PCDHA3-202ENST00000532566 XPNPEP2O43895 674 aa14.76□□□□□ -0.05
PCDHA3-202ENST00000532566 CCNKO75909 580 aa14.76□□□□□ -0.05
PCDHA3-202ENST00000532566 DGKEP52429 567 aa14.76□□□□□ -0.05
PCDHA3-202ENST00000532566 FAM26DQ5JW98 314 aa14.76□□□□□ -0.05
PCDHA3-202ENST00000532566 MSANTD1Q6ZTZ1 278 aa14.76□□□□□ -0.05
PCDHA3-202ENST00000532566 CPXM2Q8N436 756 aa14.76□□□□□ -0.05
PCDHA3-202ENST00000532566 TEX26Q8N6G2 289 aa14.76□□□□□ -0.05
PCDHA3-202ENST00000532566 KLHDC9Q8NEP7 349 aa14.76□□□□□ -0.05
PCDHA3-202ENST00000532566 SMIM14Q96QK8 99 aa14.76□□□□□ -0.05
PCDHA3-202ENST00000532566 KCNS3Q9BQ31 491 aa14.76□□□□□ -0.05
PCDHA3-202ENST00000532566 SPATA9Q9BWV2 254 aa14.76□□□□□ -0.05
PCDHA3-202ENST00000532566 MAGIXQ9H6Y5 334 aa14.76□□□□□ -0.05
PCDHA3-202ENST00000532566 RHPN2P1A8MT19 583 aa14.76□□□□□ -0.05
PCDHA3-202ENST00000532566 XKRYO14609 159 aa14.76□□□□□ -0.05
PCDHA3-202ENST00000532566 C6P13671 934 aa14.76□□□□□ -0.05
PCDHA3-202ENST00000532566 NUP62P37198 522 aaPredicted RBP14.76□□□□□ -0.05
PCDHA3-202ENST00000532566 HLCSP50747 726 aa14.76□□□□□ -0.05
PCDHA3-202ENST00000532566 ARF5P84085 180 aa14.76□□□□□ -0.05
PCDHA3-202ENST00000532566 KHDRBS2Q5VWX1 349 aaKnown RBP14.76□□□□□ -0.05
PCDHA3-202ENST00000532566 BICRALQ6AI39 1079 aa14.76□□□□□ -0.05
PCDHA3-202ENST00000532566 FBXL8Q96CD0 374 aa14.76□□□□□ -0.05
PCDHA3-202ENST00000532566 C11orf24Q96F05 449 aaPredicted RBP14.76□□□□□ -0.05
PCDHA3-202ENST00000532566 IL17FQ96PD4 163 aa14.76□□□□□ -0.05
PCDHA3-202ENST00000532566 EVA1BQ9NVM1 165 aa14.76□□□□□ -0.05
PCDHA3-202ENST00000532566 MRPS17Q9Y2R5 130 aaKnown RBP14.76□□□□□ -0.05
PCDHA3-202ENST00000532566 SLC16A8O95907 504 aa14.75□□□□□ -0.05
PCDHA3-202ENST00000532566 SUOXP51687 545 aa14.75□□□□□ -0.05
PCDHA3-202ENST00000532566 ST3GAL3Q11203 375 aa14.75□□□□□ -0.05
PCDHA3-202ENST00000532566 TOMM20Q15388 145 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms