RNA–Protein interactions for RNA: ENST00000532475.1

NUP98-219, Transcript of nucleoporin 98, humanhuman

TSL 4

Gene NUP98, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-219ENST00000532475 PRR20EP86478 221 aa7.78□□□□□ -1.16
NUP98-219ENST00000532475 PRR20CP86479 221 aa7.78□□□□□ -1.16
NUP98-219ENST00000532475 PRR20DP86480 221 aa7.78□□□□□ -1.16
NUP98-219ENST00000532475 PRR20BP86481 221 aa7.78□□□□□ -1.16
NUP98-219ENST00000532475 PRR20AP86496 221 aa7.78□□□□□ -1.16
NUP98-219ENST00000532475 MPP3Q13368 585 aa7.78□□□□□ -1.16
NUP98-219ENST00000532475 TUBA3CQ13748 450 aa7.78□□□□□ -1.16
NUP98-219ENST00000532475 FASTKQ14296 549 aaKnown RBP7.78□□□□□ -1.16
NUP98-219ENST00000532475 MESDQ14696 234 aa7.78□□□□□ -1.16
NUP98-219ENST00000532475 CCNG2Q16589 344 aa7.78□□□□□ -1.16
NUP98-219ENST00000532475 SYT16Q17RD7 645 aa7.78□□□□□ -1.16
NUP98-219ENST00000532475 CT83Q5H943 113 aa7.78□□□□□ -1.16
NUP98-219ENST00000532475 TCTE1Q5JU00 501 aa7.78□□□□□ -1.16
NUP98-219ENST00000532475 TMEM198Q66K66 360 aa7.78□□□□□ -1.16
NUP98-219ENST00000532475 FBXO42Q6P3S6 717 aa7.78□□□□□ -1.16
NUP98-219ENST00000532475 ALKBH5Q6P6C2 394 aaKnown RBP7.78□□□□□ -1.16
NUP98-219ENST00000532475 ZNF449Q6P9G9 518 aa7.78□□□□□ -1.16
NUP98-219ENST00000532475 TUBA3EQ6PEY2 450 aa7.78□□□□□ -1.16
NUP98-219ENST00000532475 TAS2R42Q7RTR8 314 aa7.78□□□□□ -1.16
NUP98-219ENST00000532475 TRIM46Q7Z4K8 759 aa7.78□□□□□ -1.16
NUP98-219ENST00000532475 PNPLA5Q7Z6Z6 429 aaPredicted RBP7.78□□□□□ -1.16
NUP98-219ENST00000532475 CXorf67Q86X51 503 aaPredicted RBP7.78□□□□□ -1.16
NUP98-219ENST00000532475 DMRTC2Q8IXT2 367 aaPredicted RBP7.78□□□□□ -1.16
NUP98-219ENST00000532475 BEST3Q8N1M1 668 aa7.78□□□□□ -1.16
NUP98-219ENST00000532475 RPRMLQ8N4K4 120 aa7.78□□□□□ -1.16
NUP98-219ENST00000532475 MDS2Q8NDY4 140 aa7.78□□□□□ -1.16
NUP98-219ENST00000532475 CHDHQ8NE62 594 aaPredicted RBP7.78□□□□□ -1.16
NUP98-219ENST00000532475 PHF10Q8WUB8 498 aaKnown RBP7.78□□□□□ -1.16
NUP98-219ENST00000532475 TFB1MQ8WVM0 346 aaKnown RBP7.78□□□□□ -1.16
NUP98-219ENST00000532475 ELMO1Q92556 727 aa7.78□□□□□ -1.16
NUP98-219ENST00000532475 RAX2Q96IS3 184 aa7.78□□□□□ -1.16
NUP98-219ENST00000532475 NPAS2Q99743 824 aa7.78□□□□□ -1.16
NUP98-219ENST00000532475 ZNF559Q9BR84 538 aa7.78□□□□□ -1.16
NUP98-219ENST00000532475 SYNPO2LQ9H987 977 aa7.78□□□□□ -1.16
NUP98-219ENST00000532475 SMURF1Q9HCE7 757 aa7.78□□□□□ -1.16
NUP98-219ENST00000532475 KLHL8Q9P2G9 620 aaPredicted RBP7.78□□□□□ -1.16
NUP98-219ENST00000532475 TRPC4Q9UBN4 977 aa7.78□□□□□ -1.16
NUP98-219ENST00000532475 LOC102723996A0A087X1L8 192 aa7.77□□□□□ -1.17
NUP98-219ENST00000532475 TRBV5-4A0A0C4DH59 114 aa7.77□□□□□ -1.17
NUP98-219ENST00000532475 KRT87PA6NCN2 255 aa7.77□□□□□ -1.17
NUP98-219ENST00000532475 ASPDHA6ND91 283 aa7.77□□□□□ -1.17
NUP98-219ENST00000532475 FAM90A27PA6NNH2 459 aa7.77□□□□□ -1.17
NUP98-219ENST00000532475 DVL2O14641 736 aa7.77□□□□□ -1.17
NUP98-219ENST00000532475 LIN7AO14910 233 aaPredicted RBP7.77□□□□□ -1.17
NUP98-219ENST00000532475 FRS3O43559 492 aa7.77□□□□□ -1.17
NUP98-219ENST00000532475 SRPX2O60687 465 aaPredicted RBP7.77□□□□□ -1.17
NUP98-219ENST00000532475 TIPRLO75663 272 aa7.77□□□□□ -1.17
NUP98-219ENST00000532475 CLEC2LP0C7M8 214 aa7.77□□□□□ -1.17
NUP98-219ENST00000532475 PAMP19021 973 aa7.77□□□□□ -1.17
NUP98-219ENST00000532475 PTX3P26022 381 aaPredicted RBP7.77□□□□□ -1.17
NUP98-219ENST00000532475 ACRV1P26436 265 aa7.77□□□□□ -1.17
NUP98-219ENST00000532475 CNTFP26441 200 aa7.77□□□□□ -1.17
NUP98-219ENST00000532475 PSMB5P28074 263 aa7.77□□□□□ -1.17
NUP98-219ENST00000532475 PKLRP30613 574 aa7.77□□□□□ -1.17
NUP98-219ENST00000532475 ADRA1AP35348 466 aa7.77□□□□□ -1.17
NUP98-219ENST00000532475 TNNT3P45378 269 aaPredicted RBP7.77□□□□□ -1.17
NUP98-219ENST00000532475 ALDH9A1P49189 494 aa7.77□□□□□ -1.17
NUP98-219ENST00000532475 NR0B1P51843 470 aaKnown RBP7.77□□□□□ -1.17
NUP98-219ENST00000532475 ZNF140P52738 457 aaPredicted RBP7.77□□□□□ -1.17
NUP98-219ENST00000532475 SNTB1Q13884 538 aaKnown RBP7.77□□□□□ -1.17
NUP98-219ENST00000532475 SPARCL1Q14515 664 aa7.77□□□□□ -1.17
NUP98-219ENST00000532475 ACER2Q5QJU3 275 aa7.77□□□□□ -1.17
NUP98-219ENST00000532475 MFSD7Q6UXD7 560 aa7.77□□□□□ -1.17
NUP98-219ENST00000532475 GALNTL5Q7Z4T8 443 aa7.77□□□□□ -1.17
NUP98-219ENST00000532475 CCDC71Q8IV32 467 aaPredicted RBP7.77□□□□□ -1.17
NUP98-219ENST00000532475 VRK3Q8IV63 474 aa7.77□□□□□ -1.17
NUP98-219ENST00000532475 AMER3Q8N944 861 aa7.77□□□□□ -1.17
NUP98-219ENST00000532475 TTC29Q8NA56 475 aaPredicted RBP7.77□□□□□ -1.17
NUP98-219ENST00000532475 ATG16L2Q8NAA4 619 aa7.77□□□□□ -1.17
NUP98-219ENST00000532475 LILRB4Q8NHJ6 448 aa7.77□□□□□ -1.17
NUP98-219ENST00000532475 HDAC10Q969S8 669 aa7.77□□□□□ -1.17
NUP98-219ENST00000532475 ULK4Q96C45 1275 aa7.77□□□□□ -1.17
NUP98-219ENST00000532475 DNAJC1Q96KC8 554 aaKnown RBP7.77□□□□□ -1.17
NUP98-219ENST00000532475 C10orf90Q96M02 699 aa7.77□□□□□ -1.17
NUP98-219ENST00000532475 FSD1LQ9BXM9 530 aa7.77□□□□□ -1.17
NUP98-219ENST00000532475 RIC8BQ9NVN3 520 aa7.77□□□□□ -1.17
NUP98-219ENST00000532475 SMARCAL1Q9NZC9 954 aa7.77□□□□□ -1.17
NUP98-219ENST00000532475 COQ3Q9NZJ6 369 aa7.77□□□□□ -1.17
NUP98-219ENST00000532475 RSPH14Q9UHP6 348 aa7.77□□□□□ -1.17
NUP98-219ENST00000532475 SLC13A4Q9UKG4 626 aa7.77□□□□□ -1.17
NUP98-219ENST00000532475 RNF6Q9Y252 685 aa7.77□□□□□ -1.17
NUP98-219ENST00000532475 HCFC1P51610 2035 aa7.76□□□□□ -1.17
NUP98-219ENST00000532475 HRNRQ86YZ3 2850 aaPredicted RBP7.76□□□□□ -1.17
NUP98-219ENST00000532475 ELOA3CA0A087WX78 387 aaPredicted RBP7.76□□□□□ -1.17
NUP98-219ENST00000532475 A0A1B0GTH9 108 aa7.76□□□□□ -1.17
NUP98-219ENST00000532475 A6NLC8 198 aa7.76□□□□□ -1.17
NUP98-219ENST00000532475 ELOA3DA6NLF2 546 aaPredicted RBP7.76□□□□□ -1.17
NUP98-219ENST00000532475 ZNF487B1APH4 448 aa7.76□□□□□ -1.17
NUP98-219ENST00000532475 PRRG2O14669 202 aa7.76□□□□□ -1.17
NUP98-219ENST00000532475 PROM1O43490 865 aa7.76□□□□□ -1.17
NUP98-219ENST00000532475 CST8O60676 142 aa7.76□□□□□ -1.17
NUP98-219ENST00000532475 CTAG2O75638 210 aa7.76□□□□□ -1.17
NUP98-219ENST00000532475 SEC24DO94855 1032 aaPredicted RBP7.76□□□□□ -1.17
NUP98-219ENST00000532475 TSPAN12O95859 305 aa7.76□□□□□ -1.17
NUP98-219ENST00000532475 HEXBP07686 556 aa7.76□□□□□ -1.17
NUP98-219ENST00000532475 HOXD4P09016 255 aaPredicted RBP7.76□□□□□ -1.17
NUP98-219ENST00000532475 ICAM2P13598 275 aa7.76□□□□□ -1.17
NUP98-219ENST00000532475 TNNT1P13805 278 aa7.76□□□□□ -1.17
NUP98-219ENST00000532475 FOSL1P15407 271 aa7.76□□□□□ -1.17
NUP98-219ENST00000532475 ZFXP17010 805 aaPredicted RBP7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms