RNA–Protein interactions for RNA: ENST00000532088.1

COPB1-208, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 3

Gene COPB1, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-208ENST00000532088 NIPAL1Q6NVV3 410 aa11.93□□□□□ -0.5
COPB1-208ENST00000532088 IGF2-ASQ6U949 168 aa11.93□□□□□ -0.5
COPB1-208ENST00000532088 ATG14Q6ZNE5 492 aa11.93□□□□□ -0.5
COPB1-208ENST00000532088 RAB11FIP2Q7L804 512 aa11.93□□□□□ -0.5
COPB1-208ENST00000532088 VN1R4Q7Z5H5 301 aa11.93□□□□□ -0.5
COPB1-208ENST00000532088 CRLF3Q8IUI8 442 aa11.93□□□□□ -0.5
COPB1-208ENST00000532088 HUS1BQ8NHY5 278 aa11.93□□□□□ -0.5
COPB1-208ENST00000532088 ZNF473Q8WTR7 871 aaKnown RBP11.93□□□□□ -0.5
COPB1-208ENST00000532088 STON2Q8WXE9 905 aa11.93□□□□□ -0.5
COPB1-208ENST00000532088 N4BP2L2Q92802 583 aaPredicted RBP11.93□□□□□ -0.5
COPB1-208ENST00000532088 ZNF775Q96BV0 537 aaPredicted RBP11.93□□□□□ -0.5
COPB1-208ENST00000532088 METTL2AQ96IZ6 378 aaKnown RBP11.93□□□□□ -0.5
COPB1-208ENST00000532088 TEFMQ96QE5 360 aaKnown RBP11.93□□□□□ -0.5
COPB1-208ENST00000532088 DDA1Q9BW61 102 aa11.93□□□□□ -0.5
COPB1-208ENST00000532088 NMRK1Q9NWW6 199 aa11.93□□□□□ -0.5
COPB1-208ENST00000532088 VTI1BQ9UEU0 232 aa11.93□□□□□ -0.5
COPB1-208ENST00000532088 ZDHHC2Q9UIJ5 367 aa11.93□□□□□ -0.5
COPB1-208ENST00000532088 RARRES3Q9UL19 164 aa11.93□□□□□ -0.5
COPB1-208ENST00000532088 PCDHGA3Q9Y5H0 932 aa11.93□□□□□ -0.5
COPB1-208ENST00000532088 EFCAB7A8K855 629 aa11.92□□□□□ -0.5
COPB1-208ENST00000532088 MANBAO00462 879 aa11.92□□□□□ -0.5
COPB1-208ENST00000532088 SEMA3DO95025 777 aa11.92□□□□□ -0.5
COPB1-208ENST00000532088 TGDSO95455 350 aa11.92□□□□□ -0.5
COPB1-208ENST00000532088 PTX3P26022 381 aaPredicted RBP11.92□□□□□ -0.5
COPB1-208ENST00000532088 TSFMP43897 325 aaKnown RBP11.92□□□□□ -0.5
COPB1-208ENST00000532088 ARSFP54793 590 aa11.92□□□□□ -0.5
COPB1-208ENST00000532088 FOXA1P55317 472 aa11.92□□□□□ -0.5
COPB1-208ENST00000532088 GUCY1A3Q02108 690 aa11.92□□□□□ -0.5
COPB1-208ENST00000532088 CYP4F3Q08477 520 aa11.92□□□□□ -0.5
COPB1-208ENST00000532088 TARDBPQ13148 414 aaKnown RBP eCLIP11.92□□□□□ -0.5
COPB1-208ENST00000532088 CUL3Q13618 768 aa11.92□□□□□ -0.5
COPB1-208ENST00000532088 GRM7Q14831 915 aa11.92□□□□□ -0.5
COPB1-208ENST00000532088 FAM214AQ32MH5 1076 aa11.92□□□□□ -0.5
COPB1-208ENST00000532088 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.92□□□□□ -0.5
COPB1-208ENST00000532088 TMEM35AQ53FP2 167 aa11.92□□□□□ -0.5
COPB1-208ENST00000532088 FRMPD2BQ6IN97 320 aa11.92□□□□□ -0.5
COPB1-208ENST00000532088 VN1R5Q7Z5H4 357 aa11.92□□□□□ -0.5
COPB1-208ENST00000532088 PPP1R3BQ86XI6 285 aa11.92□□□□□ -0.5
COPB1-208ENST00000532088 PLD3Q8IV08 490 aa11.92□□□□□ -0.5
COPB1-208ENST00000532088 LRRC34Q8IZ02 419 aa11.92□□□□□ -0.5
COPB1-208ENST00000532088 GPR135Q8IZ08 494 aa11.92□□□□□ -0.5
COPB1-208ENST00000532088 VWA5B2Q8N398 1253 aa11.92□□□□□ -0.5
COPB1-208ENST00000532088 ARHGEF39Q8N4T4 335 aa11.92□□□□□ -0.5
COPB1-208ENST00000532088 CSNK1A1LQ8N752 337 aa11.92□□□□□ -0.5
COPB1-208ENST00000532088 ZNF781Q8N8C0 355 aa11.92□□□□□ -0.5
COPB1-208ENST00000532088 TTC29Q8NA56 475 aaPredicted RBP11.92□□□□□ -0.5
COPB1-208ENST00000532088 SRFBP1Q8NEF9 429 aaKnown RBP11.92□□□□□ -0.5
COPB1-208ENST00000532088 PIWIL2Q8TC59 973 aaKnown RBP11.92□□□□□ -0.5
COPB1-208ENST00000532088 SLC13A3Q8WWT9 602 aa11.92□□□□□ -0.5
COPB1-208ENST00000532088 SELENOMQ8WWX9 145 aa11.92□□□□□ -0.5
COPB1-208ENST00000532088 MVB12AQ96EY5 273 aa11.92□□□□□ -0.5
COPB1-208ENST00000532088 CMTM7Q96FZ5 175 aa11.92□□□□□ -0.5
COPB1-208ENST00000532088 OR6C1Q96RD1 312 aa11.92□□□□□ -0.5
COPB1-208ENST00000532088 SERPINI1Q99574 410 aa11.92□□□□□ -0.5
COPB1-208ENST00000532088 SIKE1Q9BRV8 207 aa11.92□□□□□ -0.5
COPB1-208ENST00000532088 CENPKQ9BS16 269 aa11.92□□□□□ -0.5
COPB1-208ENST00000532088 MS4A8Q9BY19 250 aa11.92□□□□□ -0.5
COPB1-208ENST00000532088 TNFRSF12AQ9NP84 129 aa11.92□□□□□ -0.5
COPB1-208ENST00000532088 DMRT3Q9NQL9 472 aa11.92□□□□□ -0.5
COPB1-208ENST00000532088 OCIAD1Q9NX40 245 aa11.92□□□□□ -0.5
COPB1-208ENST00000532088 SRPK3Q9UPE1 567 aa11.92□□□□□ -0.5
COPB1-208ENST00000532088 DNAJC15Q9Y5T4 150 aa11.92□□□□□ -0.5
COPB1-208ENST00000532088 CEP250Q9BV73 2442 aa11.91□□□□□ -0.5
COPB1-208ENST00000532088 LOC105369274A0A096LPK9 316 aa11.91□□□□□ -0.5
COPB1-208ENST00000532088 LOC102723532A0A0G2JNH3 316 aa11.91□□□□□ -0.5
COPB1-208ENST00000532088 SRRM3A6NNA2 597 aaPredicted RBP11.91□□□□□ -0.5
COPB1-208ENST00000532088 TMEM150CB9EJG8 249 aa11.91□□□□□ -0.5
COPB1-208ENST00000532088 SLC28A1O00337 649 aa11.91□□□□□ -0.5
COPB1-208ENST00000532088 PLD2O14939 933 aa11.91□□□□□ -0.5
COPB1-208ENST00000532088 POLR1CO15160 346 aaPredicted RBP11.91□□□□□ -0.5
COPB1-208ENST00000532088 NDUFS4O43181 175 aa11.91□□□□□ -0.5
COPB1-208ENST00000532088 HCRTR1O43613 425 aa11.91□□□□□ -0.5
COPB1-208ENST00000532088 EDF1O60869 148 aaKnown RBP11.91□□□□□ -0.5
COPB1-208ENST00000532088 OR2B3O76000 313 aa11.91□□□□□ -0.5
COPB1-208ENST00000532088 HBQ1P09105 142 aa11.91□□□□□ -0.5
COPB1-208ENST00000532088 PCNAP12004 261 aa11.91□□□□□ -0.5
COPB1-208ENST00000532088 PRPH2P23942 346 aa11.91□□□□□ -0.5
COPB1-208ENST00000532088 VSX2P58304 361 aaPredicted RBP11.91□□□□□ -0.5
COPB1-208ENST00000532088 FAM53BQ14153 422 aa11.91□□□□□ -0.5
COPB1-208ENST00000532088 KCNAB1Q14722 419 aa11.91□□□□□ -0.5
COPB1-208ENST00000532088 GPR19Q15760 415 aa11.91□□□□□ -0.5
COPB1-208ENST00000532088 NDUFA9Q16795 377 aa11.91□□□□□ -0.5
COPB1-208ENST00000532088 COX20Q5RI15 118 aa11.91□□□□□ -0.5
COPB1-208ENST00000532088 WASHC2DQ5SRD0 308 aa11.91□□□□□ -0.5
COPB1-208ENST00000532088 DEPDC1Q5TB30 811 aa11.91□□□□□ -0.5
COPB1-208ENST00000532088 CEACAM20Q6UY09 585 aa11.91□□□□□ -0.5
COPB1-208ENST00000532088 CHSY3Q70JA7 882 aa11.91□□□□□ -0.5
COPB1-208ENST00000532088 WDR75Q8IWA0 830 aaKnown RBP11.91□□□□□ -0.5
COPB1-208ENST00000532088 OR4N4Q8N0Y3 316 aa11.91□□□□□ -0.5
COPB1-208ENST00000532088 OR1L3Q8NH93 324 aa11.91□□□□□ -0.5
COPB1-208ENST00000532088 TWIST2Q8WVJ9 160 aa11.91□□□□□ -0.5
COPB1-208ENST00000532088 GAL3ST3Q96A11 431 aa11.91□□□□□ -0.5
COPB1-208ENST00000532088 TAAR9Q96RI9 348 aa11.91□□□□□ -0.5
COPB1-208ENST00000532088 ASPSCR1Q9BZE9 553 aa11.91□□□□□ -0.5
COPB1-208ENST00000532088 SHCBP1LQ9BZQ2 653 aa11.91□□□□□ -0.5
COPB1-208ENST00000532088 NRSN2Q9GZP1 204 aa11.91□□□□□ -0.5
COPB1-208ENST00000532088 SYNPO2LQ9H987 977 aa11.91□□□□□ -0.5
COPB1-208ENST00000532088 CLK4Q9HAZ1 481 aaKnown RBP11.91□□□□□ -0.5
COPB1-208ENST00000532088 TIMM22Q9Y584 194 aa11.91□□□□□ -0.5
COPB1-208ENST00000532088 SLC22A7Q9Y694 548 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms