RNA–Protein interactions for RNA: ENST00000531885.5

CMTM1-215, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CMTM1, Length 590 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-215ENST00000531885 SOX13Q9UN79 622 aa10.83□□□□□ -0.68
CMTM1-215ENST00000531885 RNF6Q9Y252 685 aa10.83□□□□□ -0.68
CMTM1-215ENST00000531885 COMMD10Q9Y6G5 202 aa10.83□□□□□ -0.68
CMTM1-215ENST00000531885 DNHD1Q96M86 4753 aa10.82□□□□□ -0.68
CMTM1-215ENST00000531885 ABCA2Q9BZC7 2435 aa10.82□□□□□ -0.68
CMTM1-215ENST00000531885 NKX2-6A6NCS4 301 aa10.82□□□□□ -0.68
CMTM1-215ENST00000531885 SAGE2PA6NJ88 616 aa10.82□□□□□ -0.68
CMTM1-215ENST00000531885 FIGNL2A6NMB9 653 aa10.82□□□□□ -0.68
CMTM1-215ENST00000531885 GFYI3L273 518 aa10.82□□□□□ -0.68
CMTM1-215ENST00000531885 EIF3FO00303 357 aaPredicted RBP10.82□□□□□ -0.68
CMTM1-215ENST00000531885 PEX1O43933 1283 aa10.82□□□□□ -0.68
CMTM1-215ENST00000531885 B4GALT2O60909 372 aa10.82□□□□□ -0.68
CMTM1-215ENST00000531885 HOXD4P09016 255 aaPredicted RBP10.82□□□□□ -0.68
CMTM1-215ENST00000531885 HIST1H2AGP0C0S8 130 aaPredicted RBP10.82□□□□□ -0.68
CMTM1-215ENST00000531885 ZSCAN5DPP0CG00 497 aa10.82□□□□□ -0.68
CMTM1-215ENST00000531885 DRD2P14416 443 aa10.82□□□□□ -0.68
CMTM1-215ENST00000531885 ALOX12P18054 663 aa10.82□□□□□ -0.68
CMTM1-215ENST00000531885 IGFBP2P18065 325 aa10.82□□□□□ -0.68
CMTM1-215ENST00000531885 HIST1H2ADP20671 130 aa10.82□□□□□ -0.68
CMTM1-215ENST00000531885 ARNTP27540 789 aa10.82□□□□□ -0.68
CMTM1-215ENST00000531885 DNAJA1P31689 397 aaKnown RBP10.82□□□□□ -0.68
CMTM1-215ENST00000531885 RPL22P35268 128 aaKnown RBP10.82□□□□□ -0.68
CMTM1-215ENST00000531885 COILP38432 576 aaPredicted RBP10.82□□□□□ -0.68
CMTM1-215ENST00000531885 RGS4P49798 205 aa10.82□□□□□ -0.68
CMTM1-215ENST00000531885 RNFT1Q5M7Z0 435 aa10.82□□□□□ -0.68
CMTM1-215ENST00000531885 ZNF468Q5VIY5 522 aaPredicted RBP10.82□□□□□ -0.68
CMTM1-215ENST00000531885 UGT3A1Q6NUS8 523 aa10.82□□□□□ -0.68
CMTM1-215ENST00000531885 QSOX2Q6ZRP7 698 aa10.82□□□□□ -0.68
CMTM1-215ENST00000531885 PRUNE1Q86TP1 453 aa10.82□□□□□ -0.68
CMTM1-215ENST00000531885 SULF2Q8IWU5 870 aa10.82□□□□□ -0.68
CMTM1-215ENST00000531885 KIF2BQ8N4N8 673 aa10.82□□□□□ -0.68
CMTM1-215ENST00000531885 GPATCH11Q8N954 259 aa10.82□□□□□ -0.68
CMTM1-215ENST00000531885 OR10Q1Q8NGQ4 319 aa10.82□□□□□ -0.68
CMTM1-215ENST00000531885 CREB3L4Q8TEY5 395 aa10.82□□□□□ -0.68
CMTM1-215ENST00000531885 MAIP1Q8WWC4 291 aa10.82□□□□□ -0.68
CMTM1-215ENST00000531885 TM4SF19Q96DZ7 209 aa10.82□□□□□ -0.68
CMTM1-215ENST00000531885 HIST1H2AHQ96KK5 128 aa10.82□□□□□ -0.68
CMTM1-215ENST00000531885 HIST1H2AJQ99878 128 aa10.82□□□□□ -0.68
CMTM1-215ENST00000531885 FOXC2Q99958 501 aa10.82□□□□□ -0.68
CMTM1-215ENST00000531885 CCDC77Q9BR77 488 aa10.82□□□□□ -0.68
CMTM1-215ENST00000531885 HAUS8Q9BT25 410 aa10.82□□□□□ -0.68
CMTM1-215ENST00000531885 H2AFJQ9BTM1 129 aa10.82□□□□□ -0.68
CMTM1-215ENST00000531885 TRIM45Q9H8W5 580 aaPredicted RBP10.82□□□□□ -0.68
CMTM1-215ENST00000531885 NPDC1Q9NQX5 325 aaPredicted RBP10.82□□□□□ -0.68
CMTM1-215ENST00000531885 LANCL2Q9NS86 450 aa10.82□□□□□ -0.68
CMTM1-215ENST00000531885 GALPQ9UBC7 116 aa10.82□□□□□ -0.68
CMTM1-215ENST00000531885 ERVK-11Q9UQG0 969 aa10.82□□□□□ -0.68
CMTM1-215ENST00000531885 ANKHD1Q8IWZ3 2542 aaKnown RBP10.81□□□□□ -0.68
CMTM1-215ENST00000531885 ABCA4P78363 2273 aa10.81□□□□□ -0.68
CMTM1-215ENST00000531885 MAGEB16A2A368 324 aa10.81□□□□□ -0.68
CMTM1-215ENST00000531885 FAM47E-STBD1D6RA91 191 aa10.81□□□□□ -0.68
CMTM1-215ENST00000531885 OR1F1O43749 312 aa10.81□□□□□ -0.68
CMTM1-215ENST00000531885 CEP104O60308 925 aa10.81□□□□□ -0.68
CMTM1-215ENST00000531885 AVILO75366 819 aa10.81□□□□□ -0.68
CMTM1-215ENST00000531885 FAM155BO75949 473 aa10.81□□□□□ -0.68
CMTM1-215ENST00000531885 TUBB4AP04350 444 aa10.81□□□□□ -0.68
CMTM1-215ENST00000531885 C8GP07360 202 aa10.81□□□□□ -0.68
CMTM1-215ENST00000531885 TPSB2P20231 275 aa10.81□□□□□ -0.68
CMTM1-215ENST00000531885 RFC3P40938 356 aa10.81□□□□□ -0.68
CMTM1-215ENST00000531885 CCR8P51685 355 aa10.81□□□□□ -0.68
CMTM1-215ENST00000531885 CLCN2P51788 898 aa10.81□□□□□ -0.68
CMTM1-215ENST00000531885 PLGLB1Q02325 96 aa10.81□□□□□ -0.68
CMTM1-215ENST00000531885 PMPCAQ10713 525 aa10.81□□□□□ -0.68
CMTM1-215ENST00000531885 PWP1Q13610 501 aa10.81□□□□□ -0.68
CMTM1-215ENST00000531885 DHX34Q14147 1143 aaKnown RBP10.81□□□□□ -0.68
CMTM1-215ENST00000531885 TPSAB1Q15661 275 aa10.81□□□□□ -0.68
CMTM1-215ENST00000531885 CCNG2Q16589 344 aa10.81□□□□□ -0.68
CMTM1-215ENST00000531885 PHKG1Q16816 387 aa10.81□□□□□ -0.68
CMTM1-215ENST00000531885 DEFB134Q4QY38 66 aa10.81□□□□□ -0.68
CMTM1-215ENST00000531885 FGD2Q7Z6J4 655 aa10.81□□□□□ -0.68
CMTM1-215ENST00000531885 PDSS2Q86YH6 399 aa10.81□□□□□ -0.68
CMTM1-215ENST00000531885 CHERPQ8IWX8 916 aaKnown RBP10.81□□□□□ -0.68
CMTM1-215ENST00000531885 LRRC56Q8IYG6 542 aaPredicted RBP10.81□□□□□ -0.68
CMTM1-215ENST00000531885 MFSD9Q8NBP5 474 aa10.81□□□□□ -0.68
CMTM1-215ENST00000531885 OR5T3Q8NGG3 340 aa10.81□□□□□ -0.68
CMTM1-215ENST00000531885 C16orf52Q8NHV5 167 aa10.81□□□□□ -0.68
CMTM1-215ENST00000531885 GABPB2Q8TAK5 448 aaPredicted RBP10.81□□□□□ -0.68
CMTM1-215ENST00000531885 CALML6Q8TD86 181 aa10.81□□□□□ -0.68
CMTM1-215ENST00000531885 TMUB1Q9BVT8 246 aa10.81□□□□□ -0.68
CMTM1-215ENST00000531885 UCK2Q9BZX2 261 aa10.81□□□□□ -0.68
CMTM1-215ENST00000531885 CLK4Q9HAZ1 481 aaKnown RBP10.81□□□□□ -0.68
CMTM1-215ENST00000531885 DNAJB12Q9NXW2 375 aaKnown RBP10.81□□□□□ -0.68
CMTM1-215ENST00000531885 TRMT6Q9UJA5 497 aaKnown RBP10.81□□□□□ -0.68
CMTM1-215ENST00000531885 FBXW2Q9UKT8 454 aa10.81□□□□□ -0.68
CMTM1-215ENST00000531885 DHRS7Q9Y394 339 aa10.81□□□□□ -0.68
CMTM1-215ENST00000531885 REXO2Q9Y3B8 237 aaKnown RBP10.81□□□□□ -0.68
CMTM1-215ENST00000531885 HCFC1P51610 2035 aa10.8□□□□□ -0.68
CMTM1-215ENST00000531885 FAM237BA0A1B0GVD1 139 aa10.8□□□□□ -0.68
CMTM1-215ENST00000531885 A8MVJ9 347 aa10.8□□□□□ -0.68
CMTM1-215ENST00000531885 CHST10O43529 356 aa10.8□□□□□ -0.68
CMTM1-215ENST00000531885 GALR3O60755 368 aaPredicted RBP10.8□□□□□ -0.68
CMTM1-215ENST00000531885 PDE9AO76083 593 aa10.8□□□□□ -0.68
CMTM1-215ENST00000531885 TOXO94900 526 aa10.8□□□□□ -0.68
CMTM1-215ENST00000531885 CDH1P12830 882 aa10.8□□□□□ -0.68
CMTM1-215ENST00000531885 RNH1P13489 461 aaKnown RBP10.8□□□□□ -0.68
CMTM1-215ENST00000531885 DNASE1P24855 282 aa10.8□□□□□ -0.68
CMTM1-215ENST00000531885 PEX19P40855 299 aa10.8□□□□□ -0.68
CMTM1-215ENST00000531885 IST1P53990 364 aa10.8□□□□□ -0.68
CMTM1-215ENST00000531885 TFF3Q07654 80 aa10.8□□□□□ -0.68
CMTM1-215ENST00000531885 SP140Q13342 867 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms