RNA–Protein interactions for RNA: ENST00000531858.1

AC055878.1-201, humanhuman

TSL 3 BASIC

Gene AC055878.1, Length 281 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055878.1-201ENST00000531858 SUMO4Q6EEV6 95 aa4.03□□□□□ -1.76
AC055878.1-201ENST00000531858 OR4A47Q6IF82 309 aa4.03□□□□□ -1.76
AC055878.1-201ENST00000531858 MIS18BP1Q6P0N0 1132 aa4.03□□□□□ -1.76
AC055878.1-201ENST00000531858 FAM122CQ6P4D5 195 aa4.03□□□□□ -1.76
AC055878.1-201ENST00000531858 CBLN3Q6UW01 205 aa4.03□□□□□ -1.76
AC055878.1-201ENST00000531858 DEF8Q6ZN54 512 aa4.03□□□□□ -1.76
AC055878.1-201ENST00000531858 G2E3Q7L622 706 aa4.03□□□□□ -1.76
AC055878.1-201ENST00000531858 YRDCQ86U90 279 aaKnown RBP4.03□□□□□ -1.76
AC055878.1-201ENST00000531858 BIVMQ86UB2 503 aa4.03□□□□□ -1.76
AC055878.1-201ENST00000531858 HIST2H2ABQ8IUE6 130 aaPredicted RBP4.03□□□□□ -1.76
AC055878.1-201ENST00000531858 GRAMD2AQ8IUY3 354 aa4.03□□□□□ -1.76
AC055878.1-201ENST00000531858 PSTKQ8IV42 348 aaKnown RBP4.03□□□□□ -1.76
AC055878.1-201ENST00000531858 CCDC60Q8IWA6 550 aaPredicted RBP4.03□□□□□ -1.76
AC055878.1-201ENST00000531858 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP4.03□□□□□ -1.76
AC055878.1-201ENST00000531858 RNF149Q8NC42 400 aa4.03□□□□□ -1.76
AC055878.1-201ENST00000531858 NPEPL1Q8NDH3 523 aa4.03□□□□□ -1.76
AC055878.1-201ENST00000531858 MNS1Q8NEH6 495 aa4.03□□□□□ -1.76
AC055878.1-201ENST00000531858 ZNF548Q8NEK5 533 aaPredicted RBP4.03□□□□□ -1.76
AC055878.1-201ENST00000531858 RDM1Q8NG50 284 aa4.03□□□□□ -1.76
AC055878.1-201ENST00000531858 IL17DQ8TAD2 202 aa4.03□□□□□ -1.76
AC055878.1-201ENST00000531858 TRMT10AQ8TBZ6 339 aaKnown RBP4.03□□□□□ -1.76
AC055878.1-201ENST00000531858 UBTD2Q8WUN7 234 aa4.03□□□□□ -1.76
AC055878.1-201ENST00000531858 DAZLQ92904 295 aaKnown RBP4.03□□□□□ -1.76
AC055878.1-201ENST00000531858 EMG1Q92979 244 aaKnown RBP4.03□□□□□ -1.76
AC055878.1-201ENST00000531858 DVL3Q92997 716 aaPredicted RBP4.03□□□□□ -1.76
AC055878.1-201ENST00000531858 HIST1H2ACQ93077 130 aa4.03□□□□□ -1.76
AC055878.1-201ENST00000531858 RAB39BQ96DA2 213 aa4.03□□□□□ -1.76
AC055878.1-201ENST00000531858 NTMT1Q9BV86 223 aa4.03□□□□□ -1.76
AC055878.1-201ENST00000531858 VN1R1Q9GZP7 353 aa4.03□□□□□ -1.76
AC055878.1-201ENST00000531858 ZMYND12Q9H0C1 365 aa4.03□□□□□ -1.76
AC055878.1-201ENST00000531858 RIOX1Q9H6W3 641 aa4.03□□□□□ -1.76
AC055878.1-201ENST00000531858 ACKR4Q9NPB9 350 aa4.03□□□□□ -1.76
AC055878.1-201ENST00000531858 TCF7L2Q9NQB0 619 aa4.03□□□□□ -1.76
AC055878.1-201ENST00000531858 AGPAT5Q9NUQ2 364 aa4.03□□□□□ -1.76
AC055878.1-201ENST00000531858 ZNF701Q9NV72 531 aaPredicted RBP4.03□□□□□ -1.76
AC055878.1-201ENST00000531858 TMEM45AQ9NWC5 275 aa4.03□□□□□ -1.76
AC055878.1-201ENST00000531858 SLC17A6Q9P2U8 582 aa4.03□□□□□ -1.76
AC055878.1-201ENST00000531858 RNF14Q9UBS8 474 aa4.03□□□□□ -1.76
AC055878.1-201ENST00000531858 CLEC4AQ9UMR7 237 aa4.03□□□□□ -1.76
AC055878.1-201ENST00000531858 SPIN1Q9Y657 262 aaPredicted RBP4.03□□□□□ -1.76
AC055878.1-201ENST00000531858 HS3ST3A1Q9Y663 406 aa4.03□□□□□ -1.76
AC055878.1-201ENST00000531858 UMODL1Q5DID0 1318 aa4.02□□□□□ -1.77
AC055878.1-201ENST00000531858 ARPC2O15144 300 aa4.02□□□□□ -1.77
AC055878.1-201ENST00000531858 SYT7O43581 403 aa4.02□□□□□ -1.77
AC055878.1-201ENST00000531858 DCXO43602 365 aa4.02□□□□□ -1.77
AC055878.1-201ENST00000531858 EXTL3O43909 919 aa4.02□□□□□ -1.77
AC055878.1-201ENST00000531858 ACSL4O60488 711 aa4.02□□□□□ -1.77
AC055878.1-201ENST00000531858 NDUFS7O75251 213 aa4.02□□□□□ -1.77
AC055878.1-201ENST00000531858 GMNNO75496 209 aa4.02□□□□□ -1.77
AC055878.1-201ENST00000531858 SOX30O94993 753 aa4.02□□□□□ -1.77
AC055878.1-201ENST00000531858 NDUFA7O95182 113 aa4.02□□□□□ -1.77
AC055878.1-201ENST00000531858 BMP10O95393 424 aa4.02□□□□□ -1.77
AC055878.1-201ENST00000531858 CPNE6O95741 557 aa4.02□□□□□ -1.77
AC055878.1-201ENST00000531858 S100A9P06702 114 aaKnown RBP4.02□□□□□ -1.77
AC055878.1-201ENST00000531858 CHRNGP07510 517 aa4.02□□□□□ -1.77
AC055878.1-201ENST00000531858 FGF2P09038 288 aa4.02□□□□□ -1.77
AC055878.1-201ENST00000531858 ZNF44P15621 663 aa4.02□□□□□ -1.77
AC055878.1-201ENST00000531858 NCF2P19878 526 aaPredicted RBP4.02□□□□□ -1.77
AC055878.1-201ENST00000531858 CD9P21926 228 aa4.02□□□□□ -1.77
AC055878.1-201ENST00000531858 PAICSP22234 425 aaKnown RBP4.02□□□□□ -1.77
AC055878.1-201ENST00000531858 RFC2P35250 354 aa4.02□□□□□ -1.77
AC055878.1-201ENST00000531858 MNDAP41218 407 aa4.02□□□□□ -1.77
AC055878.1-201ENST00000531858 RARRES1P49788 294 aa4.02□□□□□ -1.77
AC055878.1-201ENST00000531858 KRTAP10-2P60368 255 aa4.02□□□□□ -1.77
AC055878.1-201ENST00000531858 ZP1P60852 638 aa4.02□□□□□ -1.77
AC055878.1-201ENST00000531858 RASGEF1BQ0VAM2 473 aa4.02□□□□□ -1.77
AC055878.1-201ENST00000531858 SQLEQ14534 574 aa4.02□□□□□ -1.77
AC055878.1-201ENST00000531858 NONOQ15233 471 aaKnown RBP eCLIP4.02□□□□□ -1.77
AC055878.1-201ENST00000531858 ASPHD1Q5U4P2 390 aa4.02□□□□□ -1.77
AC055878.1-201ENST00000531858 AADACL4Q5VUY2 407 aa4.02□□□□□ -1.77
AC055878.1-201ENST00000531858 SLC39A4Q6P5W5 647 aa4.02□□□□□ -1.77
AC055878.1-201ENST00000531858 BNIPLQ7Z465 357 aa4.02□□□□□ -1.77
AC055878.1-201ENST00000531858 MRGPREQ86SM8 312 aa4.02□□□□□ -1.77
AC055878.1-201ENST00000531858 SERINC5Q86VE9 423 aa4.02□□□□□ -1.77
AC055878.1-201ENST00000531858 TMPRSS12Q86WS5 348 aa4.02□□□□□ -1.77
AC055878.1-201ENST00000531858 C1orf210Q8IVY1 113 aa4.02□□□□□ -1.77
AC055878.1-201ENST00000531858 MAP7D3Q8IWC1 876 aa4.02□□□□□ -1.77
AC055878.1-201ENST00000531858 FAM114A1Q8IWE2 563 aa4.02□□□□□ -1.77
AC055878.1-201ENST00000531858 GPALPP1Q8IXQ4 340 aa4.02□□□□□ -1.77
AC055878.1-201ENST00000531858 LRRC75A-AS1Q8N1F1 130 aa4.02□□□□□ -1.77
AC055878.1-201ENST00000531858 PNLDC1Q8NA58 520 aaKnown RBP4.02□□□□□ -1.77
AC055878.1-201ENST00000531858 ACVR1CQ8NER5 493 aa4.02□□□□□ -1.77
AC055878.1-201ENST00000531858 OR52I2Q8NH67 350 aa4.02□□□□□ -1.77
AC055878.1-201ENST00000531858 SLC2A14Q8TDB8 520 aa4.02□□□□□ -1.77
AC055878.1-201ENST00000531858 TSACCQ96A04 125 aaPredicted RBP4.02□□□□□ -1.77
AC055878.1-201ENST00000531858 AZIN2Q96A70 460 aa4.02□□□□□ -1.77
AC055878.1-201ENST00000531858 RFT1Q96AA3 541 aa4.02□□□□□ -1.77
AC055878.1-201ENST00000531858 EME1Q96AY2 570 aa4.02□□□□□ -1.77
AC055878.1-201ENST00000531858 LGALS12Q96DT0 336 aa4.02□□□□□ -1.77
AC055878.1-201ENST00000531858 FAM20AQ96MK3 541 aa4.02□□□□□ -1.77
AC055878.1-201ENST00000531858 TCEANC2Q96MN5 208 aa4.02□□□□□ -1.77
AC055878.1-201ENST00000531858 VPS35Q96QK1 796 aa4.02□□□□□ -1.77
AC055878.1-201ENST00000531858 MTERF1Q99551 399 aaKnown RBP4.02□□□□□ -1.77
AC055878.1-201ENST00000531858 MAP3K3Q99759 626 aa4.02□□□□□ -1.77
AC055878.1-201ENST00000531858 SH2D3AQ9BRG2 576 aa4.02□□□□□ -1.77
AC055878.1-201ENST00000531858 TRMT61BQ9BVS5 477 aaKnown RBP4.02□□□□□ -1.77
AC055878.1-201ENST00000531858 C1QTNF7Q9BXJ2 289 aa4.02□□□□□ -1.77
AC055878.1-201ENST00000531858 NUSAP1Q9BXS6 441 aaKnown RBP4.02□□□□□ -1.77
AC055878.1-201ENST00000531858 ARRDC1-AS1Q9H2J1 176 aa4.02□□□□□ -1.77
AC055878.1-201ENST00000531858 AAMDCQ9H7C9 122 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms