RNA–Protein interactions for RNA: ENST00000530961.5

CCS-206, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 5

Gene CCS, Length 1,214 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-206ENST00000530961 TRPC4APQ8TEL6 797 aa14.54□□□□□ -0.08
CCS-206ENST00000530961 CT55Q8WUE5 264 aa14.54□□□□□ -0.08
CCS-206ENST00000530961 SREK1Q8WXA9 508 aaKnown RBP14.54□□□□□ -0.08
CCS-206ENST00000530961 ZNF382Q96SR6 550 aa14.54□□□□□ -0.08
CCS-206ENST00000530961 MACROD1Q9BQ69 325 aa14.54□□□□□ -0.08
CCS-206ENST00000530961 SLC6A16Q9GZN6 736 aa14.54□□□□□ -0.08
CCS-206ENST00000530961 ZNF304Q9HCX3 659 aa14.54□□□□□ -0.08
CCS-206ENST00000530961 WDR70Q9NW82 654 aa14.54□□□□□ -0.08
CCS-206ENST00000530961 IFT80Q9P2H3 777 aaPredicted RBP14.54□□□□□ -0.08
CCS-206ENST00000530961 SLC17A7Q9P2U7 560 aa14.54□□□□□ -0.08
CCS-206ENST00000530961 RNF11Q9Y3C5 154 aa14.54□□□□□ -0.08
CCS-206ENST00000530961 PTPRBP23467 1997 aa14.54□□□□□ -0.08
CCS-206ENST00000530961 LRIT2A6NDA9 550 aa14.53□□□□□ -0.08
CCS-206ENST00000530961 AGPSO00116 658 aa14.53□□□□□ -0.08
CCS-206ENST00000530961 TERTO14746 1132 aaKnown RBP14.53□□□□□ -0.08
CCS-206ENST00000530961 FOXS1O43638 330 aa14.53□□□□□ -0.08
CCS-206ENST00000530961 ZWINTO95229 277 aa14.53□□□□□ -0.08
CCS-206ENST00000530961 MED26O95402 600 aa14.53□□□□□ -0.08
CCS-206ENST00000530961 NSA2O95478 260 aaKnown RBP14.53□□□□□ -0.08
CCS-206ENST00000530961 RECKO95980 971 aa14.53□□□□□ -0.08
CCS-206ENST00000530961 STATHP02808 62 aa14.53□□□□□ -0.08
CCS-206ENST00000530961 LIFP15018 202 aa14.53□□□□□ -0.08
CCS-206ENST00000530961 NAGLUP54802 743 aa14.53□□□□□ -0.08
CCS-206ENST00000530961 CYP4F2P78329 520 aa14.53□□□□□ -0.08
CCS-206ENST00000530961 PHEXP78562 749 aa14.53□□□□□ -0.08
CCS-206ENST00000530961 LCP2Q13094 533 aa14.53□□□□□ -0.08
CCS-206ENST00000530961 TRAF3Q13114 568 aa14.53□□□□□ -0.08
CCS-206ENST00000530961 CPSF6Q16630 551 aaKnown RBP eCLIP14.53□□□□□ -0.08
CCS-206ENST00000530961 AGBL2Q5U5Z8 902 aa14.53□□□□□ -0.08
CCS-206ENST00000530961 LCN10Q6JVE6 187 aa14.53□□□□□ -0.08
CCS-206ENST00000530961 AFAP1L2Q8N4X5 818 aa14.53□□□□□ -0.08
CCS-206ENST00000530961 CCNYL1Q8N7R7 359 aa14.53□□□□□ -0.08
CCS-206ENST00000530961 CCT6BQ92526 530 aa14.53□□□□□ -0.08
CCS-206ENST00000530961 FKBP10Q96AY3 582 aa14.53□□□□□ -0.08
CCS-206ENST00000530961 MOCOSQ96EN8 888 aa14.53□□□□□ -0.08
CCS-206ENST00000530961 SLC45A3Q96JT2 553 aa14.53□□□□□ -0.08
CCS-206ENST00000530961 CLK4Q9HAZ1 481 aaKnown RBP14.53□□□□□ -0.08
CCS-206ENST00000530961 ANKHQ9HCJ1 492 aa14.53□□□□□ -0.08
CCS-206ENST00000530961 KCNK9Q9NPC2 374 aa14.53□□□□□ -0.08
CCS-206ENST00000530961 PSD3Q9NYI0 1048 aa14.53□□□□□ -0.08
CCS-206ENST00000530961 GPN3Q9UHW5 284 aaPredicted RBP14.53□□□□□ -0.08
CCS-206ENST00000530961 FARSAQ9Y285 508 aaKnown RBP14.53□□□□□ -0.08
CCS-206ENST00000530961 CAPN1P07384 714 aa14.52□□□□□ -0.09
CCS-206ENST00000530961 PCNAP12004 261 aa14.52□□□□□ -0.09
CCS-206ENST00000530961 ALOX12P18054 663 aa14.52□□□□□ -0.09
CCS-206ENST00000530961 ITGAXP20702 1163 aa14.52□□□□□ -0.09
CCS-206ENST00000530961 PTPN4P29074 926 aa14.52□□□□□ -0.09
CCS-206ENST00000530961 ETV4P43268 484 aa14.52□□□□□ -0.09
CCS-206ENST00000530961 OR1D4P47884 311 aa14.52□□□□□ -0.09
CCS-206ENST00000530961 SLC18A1P54219 525 aa14.52□□□□□ -0.09
CCS-206ENST00000530961 PKNOX1P55347 436 aa14.52□□□□□ -0.09
CCS-206ENST00000530961 MAGOHP61326 146 aaKnown RBP14.52□□□□□ -0.09
CCS-206ENST00000530961 MC1RQ01726 317 aa14.52□□□□□ -0.09
CCS-206ENST00000530961 TGM3Q08188 693 aa14.52□□□□□ -0.09
CCS-206ENST00000530961 HYAL2Q12891 473 aa14.52□□□□□ -0.09
CCS-206ENST00000530961 DSG2Q14126 1118 aa14.52□□□□□ -0.09
CCS-206ENST00000530961 PCLAFQ15004 111 aa14.52□□□□□ -0.09
CCS-206ENST00000530961 NCF4Q15080 339 aa14.52□□□□□ -0.09
CCS-206ENST00000530961 ZRSR2Q15696 482 aaKnown RBP14.52□□□□□ -0.09
CCS-206ENST00000530961 TMEM35AQ53FP2 167 aa14.52□□□□□ -0.09
CCS-206ENST00000530961 MLIPQ5VWP3 458 aa14.52□□□□□ -0.09
CCS-206ENST00000530961 FAM198BQ6UWH4 519 aa14.52□□□□□ -0.09
CCS-206ENST00000530961 GPRIN3Q6ZVF9 776 aa14.52□□□□□ -0.09
CCS-206ENST00000530961 CHSY3Q70JA7 882 aa14.52□□□□□ -0.09
CCS-206ENST00000530961 RPS27LQ71UM5 84 aaKnown RBP14.52□□□□□ -0.09
CCS-206ENST00000530961 OVCH1Q7RTY7 1134 aa14.52□□□□□ -0.09
CCS-206ENST00000530961 VN1R5Q7Z5H4 357 aa14.52□□□□□ -0.09
CCS-206ENST00000530961 VASH2Q86V25 355 aa14.52□□□□□ -0.09
CCS-206ENST00000530961 ZSCAN1Q8NBB4 408 aa14.52□□□□□ -0.09
CCS-206ENST00000530961 SRFBP1Q8NEF9 429 aaKnown RBP14.52□□□□□ -0.09
CCS-206ENST00000530961 OR4F6Q8NGB9 312 aa14.52□□□□□ -0.09
CCS-206ENST00000530961 HUS1BQ8NHY5 278 aa14.52□□□□□ -0.09
CCS-206ENST00000530961 UTP15Q8TED0 518 aaKnown RBP14.52□□□□□ -0.09
CCS-206ENST00000530961 ZNF473Q8WTR7 871 aaKnown RBP14.52□□□□□ -0.09
CCS-206ENST00000530961 ZBTB9Q96C00 473 aa14.52□□□□□ -0.09
CCS-206ENST00000530961 TLCD1Q96CP7 247 aa14.52□□□□□ -0.09
CCS-206ENST00000530961 MMABQ96EY8 250 aaPredicted RBP14.52□□□□□ -0.09
CCS-206ENST00000530961 CMTM7Q96FZ5 175 aa14.52□□□□□ -0.09
CCS-206ENST00000530961 CNDP1Q96KN2 507 aa14.52□□□□□ -0.09
CCS-206ENST00000530961 CDK15Q96Q40 435 aa14.52□□□□□ -0.09
CCS-206ENST00000530961 TRMOQ9BU70 441 aa14.52□□□□□ -0.09
CCS-206ENST00000530961 REXO4Q9GZR2 422 aaKnown RBP14.52□□□□□ -0.09
CCS-206ENST00000530961 SLC26A1Q9H2B4 701 aa14.52□□□□□ -0.09
CCS-206ENST00000530961 GSTO2Q9H4Y5 243 aa14.52□□□□□ -0.09
CCS-206ENST00000530961 PRORYQ9H606 182 aa14.52□□□□□ -0.09
CCS-206ENST00000530961 PRM3Q9NNZ6 103 aa14.52□□□□□ -0.09
CCS-206ENST00000530961 NXT1Q9UKK6 140 aaKnown RBP14.52□□□□□ -0.09
CCS-206ENST00000530961 PADI2Q9Y2J8 665 aa14.52□□□□□ -0.09
CCS-206ENST00000530961 A0A088AWK7 358 aa14.51□□□□□ -0.09
CCS-206ENST00000530961 UQCRHLA0A096LP55 91 aa14.51□□□□□ -0.09
CCS-206ENST00000530961 A0A0A6YYC8 382 aaPredicted RBP14.51□□□□□ -0.09
CCS-206ENST00000530961 I3L1I5 382 aaPredicted RBP14.51□□□□□ -0.09
CCS-206ENST00000530961 FOXE1O00358 373 aaPredicted RBP14.51□□□□□ -0.09
CCS-206ENST00000530961 PPP6CO00743 305 aa14.51□□□□□ -0.09
CCS-206ENST00000530961 ESRRBO95718 433 aa14.51□□□□□ -0.09
CCS-206ENST00000530961 BPGMP07738 259 aa14.51□□□□□ -0.09
CCS-206ENST00000530961 UQCRHP07919 91 aa14.51□□□□□ -0.09
CCS-206ENST00000530961 SMIM10L1P0DMW3 83 aa14.51□□□□□ -0.09
CCS-206ENST00000530961 TSPAN8P19075 237 aa14.51□□□□□ -0.09
CCS-206ENST00000530961 ZNF10P21506 573 aaPredicted RBP14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms