RNA–Protein interactions for RNA: ENST00000529856.5

CCDC90B-216, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 1,039 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-216ENST00000529856 PYGBP11216 843 aa12□□□□□ -0.49
CCDC90B-216ENST00000529856 DEKP35659 375 aaKnown RBP12□□□□□ -0.49
CCDC90B-216ENST00000529856 SLCO1A2P46721 670 aa12□□□□□ -0.49
CCDC90B-216ENST00000529856 RRADP55042 308 aa12□□□□□ -0.49
CCDC90B-216ENST00000529856 MAT1AQ00266 395 aaKnown RBP12□□□□□ -0.49
CCDC90B-216ENST00000529856 TOR1AIP1Q5JTV8 583 aa12□□□□□ -0.49
CCDC90B-216ENST00000529856 CPZQ66K79 652 aa12□□□□□ -0.49
CCDC90B-216ENST00000529856 NIPAL1Q6NVV3 410 aa12□□□□□ -0.49
CCDC90B-216ENST00000529856 SH2D5Q6ZV89 423 aa12□□□□□ -0.49
CCDC90B-216ENST00000529856 ABHD13Q7L211 337 aa12□□□□□ -0.49
CCDC90B-216ENST00000529856 VN1R5Q7Z5H4 357 aa12□□□□□ -0.49
CCDC90B-216ENST00000529856 ZC3H7AQ8IWR0 971 aaKnown RBP12□□□□□ -0.49
CCDC90B-216ENST00000529856 PRSS58Q8IYP2 241 aa12□□□□□ -0.49
CCDC90B-216ENST00000529856 CYP4X1Q8N118 509 aa12□□□□□ -0.49
CCDC90B-216ENST00000529856 OR51Q1Q8NH59 317 aa12□□□□□ -0.49
CCDC90B-216ENST00000529856 EPS8L3Q8TE67 593 aaKnown RBP12□□□□□ -0.49
CCDC90B-216ENST00000529856 CAVIN3Q969G5 261 aa12□□□□□ -0.49
CCDC90B-216ENST00000529856 FER1L6-AS2Q96M78 137 aa12□□□□□ -0.49
CCDC90B-216ENST00000529856 CRB3Q9BUF7 120 aa12□□□□□ -0.49
CCDC90B-216ENST00000529856 AICDAQ9GZX7 198 aa12□□□□□ -0.49
CCDC90B-216ENST00000529856 ACSS2Q9NR19 701 aa12□□□□□ -0.49
CCDC90B-216ENST00000529856 TMEM216Q9P0N5 145 aa12□□□□□ -0.49
CCDC90B-216ENST00000529856 C3orf18Q9UK00 162 aa12□□□□□ -0.49
CCDC90B-216ENST00000529856 RAB21Q9UL25 225 aa12□□□□□ -0.49
CCDC90B-216ENST00000529856 ANGPTL3Q9Y5C1 460 aa12□□□□□ -0.49
CCDC90B-216ENST00000529856 HS3ST3B1Q9Y662 390 aa12□□□□□ -0.49
CCDC90B-216ENST00000529856 LRIT2A6NDA9 550 aa11.99□□□□□ -0.49
CCDC90B-216ENST00000529856 MKRN2OSH3BPM6 223 aa11.99□□□□□ -0.49
CCDC90B-216ENST00000529856 AGPSO00116 658 aa11.99□□□□□ -0.49
CCDC90B-216ENST00000529856 SOCS6O14544 535 aa11.99□□□□□ -0.49
CCDC90B-216ENST00000529856 CDH16O75309 829 aa11.99□□□□□ -0.49
CCDC90B-216ENST00000529856 RDH16O75452 317 aa11.99□□□□□ -0.49
CCDC90B-216ENST00000529856 DNAJB5O75953 348 aa11.99□□□□□ -0.49
CCDC90B-216ENST00000529856 TBX6O95947 436 aaPredicted RBP11.99□□□□□ -0.49
CCDC90B-216ENST00000529856 B3GALT4O96024 378 aa11.99□□□□□ -0.49
CCDC90B-216ENST00000529856 PRB1P04280 392 aa11.99□□□□□ -0.49
CCDC90B-216ENST00000529856 GSTA1P08263 222 aa11.99□□□□□ -0.49
CCDC90B-216ENST00000529856 NUDT17P0C025 328 aa11.99□□□□□ -0.49
CCDC90B-216ENST00000529856 IL10P22301 178 aa11.99□□□□□ -0.49
CCDC90B-216ENST00000529856 EEF1DP29692 281 aaKnown RBP11.99□□□□□ -0.49
CCDC90B-216ENST00000529856 HNRNPH1P31943 449 aaKnown RBP11.99□□□□□ -0.49
CCDC90B-216ENST00000529856 HNF4AP41235 474 aa11.99□□□□□ -0.49
CCDC90B-216ENST00000529856 PIK3CGP48736 1102 aa11.99□□□□□ -0.49
CCDC90B-216ENST00000529856 CCL11P51671 97 aa11.99□□□□□ -0.49
CCDC90B-216ENST00000529856 EMP2P54851 167 aa11.99□□□□□ -0.49
CCDC90B-216ENST00000529856 RAB8AP61006 207 aa11.99□□□□□ -0.49
CCDC90B-216ENST00000529856 STXBP1P61764 594 aaKnown RBP11.99□□□□□ -0.49
CCDC90B-216ENST00000529856 SKP1P63208 163 aa11.99□□□□□ -0.49
CCDC90B-216ENST00000529856 CHAF1BQ13112 559 aa11.99□□□□□ -0.49
CCDC90B-216ENST00000529856 GTF2H2Q13888 395 aa11.99□□□□□ -0.49
CCDC90B-216ENST00000529856 RBBP7Q16576 425 aa11.99□□□□□ -0.49
CCDC90B-216ENST00000529856 DEFB134Q4QY38 66 aa11.99□□□□□ -0.49
CCDC90B-216ENST00000529856 LIPJQ5W064 366 aa11.99□□□□□ -0.49
CCDC90B-216ENST00000529856 GTF2H2CQ6P1K8 395 aa11.99□□□□□ -0.49
CCDC90B-216ENST00000529856 KIRREL2Q6UWL6 708 aa11.99□□□□□ -0.49
CCDC90B-216ENST00000529856 GOLGA7Q7Z5G4 137 aa11.99□□□□□ -0.49
CCDC90B-216ENST00000529856 LAS2Q8IYD9 372 aa11.99□□□□□ -0.49
CCDC90B-216ENST00000529856 SHISA5Q8N114 240 aa11.99□□□□□ -0.49
CCDC90B-216ENST00000529856 UBE2E3Q969T4 207 aa11.99□□□□□ -0.49
CCDC90B-216ENST00000529856 MS4A6EQ96DS6 147 aa11.99□□□□□ -0.49
CCDC90B-216ENST00000529856 ABHD17AQ96GS6 310 aa11.99□□□□□ -0.49
CCDC90B-216ENST00000529856 SLC25A18Q9H1K4 315 aa11.99□□□□□ -0.49
CCDC90B-216ENST00000529856 IPPKQ9H8X2 491 aa11.99□□□□□ -0.49
CCDC90B-216ENST00000529856 CLK4Q9HAZ1 481 aaKnown RBP11.99□□□□□ -0.49
CCDC90B-216ENST00000529856 HCN3Q9P1Z3 774 aa11.99□□□□□ -0.49
CCDC90B-216ENST00000529856 DCDC2Q9UHG0 476 aa11.99□□□□□ -0.49
CCDC90B-216ENST00000529856 METRNQ9UJH8 293 aa11.99□□□□□ -0.49
CCDC90B-216ENST00000529856 ATRXP46100 2492 aa11.98□□□□□ -0.49
CCDC90B-216ENST00000529856 ZNF860A6NHJ4 632 aa11.98□□□□□ -0.49
CCDC90B-216ENST00000529856 SMIM23A6NLE4 172 aa11.98□□□□□ -0.49
CCDC90B-216ENST00000529856 A8MT66 165 aa11.98□□□□□ -0.49
CCDC90B-216ENST00000529856 FOXO6A8MYZ6 492 aa11.98□□□□□ -0.49
CCDC90B-216ENST00000529856 IDSB3KWA1 339 aa11.98□□□□□ -0.49
CCDC90B-216ENST00000529856 C4orf51C9J302 202 aa11.98□□□□□ -0.49
CCDC90B-216ENST00000529856 UGDHO60701 494 aa11.98□□□□□ -0.49
CCDC90B-216ENST00000529856 DNAJB6O75190 326 aa11.98□□□□□ -0.49
CCDC90B-216ENST00000529856 JRKO75564 520 aa11.98□□□□□ -0.49
CCDC90B-216ENST00000529856 CEACAM4O75871 244 aa11.98□□□□□ -0.49
CCDC90B-216ENST00000529856 C1QL1O75973 258 aa11.98□□□□□ -0.49
CCDC90B-216ENST00000529856 TUBBP07437 444 aa11.98□□□□□ -0.49
CCDC90B-216ENST00000529856 HEXBP07686 556 aa11.98□□□□□ -0.49
CCDC90B-216ENST00000529856 KRT15P19012 456 aa11.98□□□□□ -0.49
CCDC90B-216ENST00000529856 HPDP32754 393 aaPredicted RBP11.98□□□□□ -0.49
CCDC90B-216ENST00000529856 XCR1P46094 333 aa11.98□□□□□ -0.49
CCDC90B-216ENST00000529856 ADPRMQ3LIE5 342 aa11.98□□□□□ -0.49
CCDC90B-216ENST00000529856 DCAF10Q5QP82 559 aa11.98□□□□□ -0.49
CCDC90B-216ENST00000529856 ADNP2Q6IQ32 1131 aa11.98□□□□□ -0.49
CCDC90B-216ENST00000529856 GRHL2Q6ISB3 625 aa11.98□□□□□ -0.49
CCDC90B-216ENST00000529856 MED27Q6P2C8 311 aa11.98□□□□□ -0.49
CCDC90B-216ENST00000529856 ZNF843Q8N446 348 aa11.98□□□□□ -0.49
CCDC90B-216ENST00000529856 MREGQ8N565 214 aa11.98□□□□□ -0.49
CCDC90B-216ENST00000529856 L3MBTL4Q8NA19 623 aa11.98□□□□□ -0.49
CCDC90B-216ENST00000529856 OR7G3Q8NG95 312 aa11.98□□□□□ -0.49
CCDC90B-216ENST00000529856 OR11G2Q8NGC1 345 aa11.98□□□□□ -0.49
CCDC90B-216ENST00000529856 OR5T3Q8NGG3 340 aa11.98□□□□□ -0.49
CCDC90B-216ENST00000529856 OR2W6PQ8NHA6 318 aa11.98□□□□□ -0.49
CCDC90B-216ENST00000529856 ZNF473Q8WTR7 871 aaKnown RBP11.98□□□□□ -0.49
CCDC90B-216ENST00000529856 CCT6BQ92526 530 aa11.98□□□□□ -0.49
CCDC90B-216ENST00000529856 GAL3ST3Q96A11 431 aa11.98□□□□□ -0.49
CCDC90B-216ENST00000529856 VPS50Q96JG6 964 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms