RNA–Protein interactions for RNA: ENST00000529553.1

AMBRA1-207, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 3

Gene AMBRA1, Length 586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-207ENST00000529553 PEX11GQ96HA9 241 aa10.82□□□□□ -0.68
AMBRA1-207ENST00000529553 Q96MF0 132 aa10.82□□□□□ -0.68
AMBRA1-207ENST00000529553 HEMGNQ9BXL5 484 aa10.82□□□□□ -0.68
AMBRA1-207ENST00000529553 TTTY12Q9BZ98 90 aa10.82□□□□□ -0.68
AMBRA1-207ENST00000529553 ATG10Q9H0Y0 220 aa10.82□□□□□ -0.68
AMBRA1-207ENST00000529553 P2RY12Q9H244 342 aa10.82□□□□□ -0.68
AMBRA1-207ENST00000529553 DEPPQ9NTK1 212 aa10.82□□□□□ -0.68
AMBRA1-207ENST00000529553 ANAPC5Q9UJX4 755 aa10.82□□□□□ -0.68
AMBRA1-207ENST00000529553 HYOU1Q9Y4L1 999 aa10.82□□□□□ -0.68
AMBRA1-207ENST00000529553 FAM166BA8MTA8 275 aa10.81□□□□□ -0.68
AMBRA1-207ENST00000529553 E7ENX8 843 aa10.81□□□□□ -0.68
AMBRA1-207ENST00000529553 H7BY64 318 aa10.81□□□□□ -0.68
AMBRA1-207ENST00000529553 SMAD7O15105 426 aaKnown RBP10.81□□□□□ -0.68
AMBRA1-207ENST00000529553 SMPD2O60906 423 aa10.81□□□□□ -0.68
AMBRA1-207ENST00000529553 RDH16O75452 317 aa10.81□□□□□ -0.68
AMBRA1-207ENST00000529553 CDC123O75794 336 aaPredicted RBP10.81□□□□□ -0.68
AMBRA1-207ENST00000529553 GAS8O95995 478 aa10.81□□□□□ -0.68
AMBRA1-207ENST00000529553 IFNA2P01563 188 aa10.81□□□□□ -0.68
AMBRA1-207ENST00000529553 HRGP04196 525 aa10.81□□□□□ -0.68
AMBRA1-207ENST00000529553 CNR1P21554 472 aa10.81□□□□□ -0.68
AMBRA1-207ENST00000529553 RPS3P23396 243 aaKnown RBP eCLIP10.81□□□□□ -0.68
AMBRA1-207ENST00000529553 ADRA1DP25100 572 aa10.81□□□□□ -0.68
AMBRA1-207ENST00000529553 MAN2A2P49641 1150 aa10.81□□□□□ -0.68
AMBRA1-207ENST00000529553 SSR4P51571 173 aa10.81□□□□□ -0.68
AMBRA1-207ENST00000529553 CLCN2P51788 898 aa10.81□□□□□ -0.68
AMBRA1-207ENST00000529553 EIF3EP60228 445 aaKnown RBP10.81□□□□□ -0.68
AMBRA1-207ENST00000529553 TAP2Q03519 686 aa10.81□□□□□ -0.68
AMBRA1-207ENST00000529553 GBX1Q14549 363 aa10.81□□□□□ -0.68
AMBRA1-207ENST00000529553 SEMA3AQ14563 771 aa10.81□□□□□ -0.68
AMBRA1-207ENST00000529553 SLC10A1Q14973 349 aa10.81□□□□□ -0.68
AMBRA1-207ENST00000529553 HERC3Q15034 1050 aa10.81□□□□□ -0.68
AMBRA1-207ENST00000529553 CCDC38Q502W7 563 aa10.81□□□□□ -0.68
AMBRA1-207ENST00000529553 TSTD2Q5T7W7 516 aa10.81□□□□□ -0.68
AMBRA1-207ENST00000529553 CCDC181Q5TID7 509 aa10.81□□□□□ -0.68
AMBRA1-207ENST00000529553 PODNL1Q6PEZ8 512 aa10.81□□□□□ -0.68
AMBRA1-207ENST00000529553 QSOX2Q6ZRP7 698 aa10.81□□□□□ -0.68
AMBRA1-207ENST00000529553 GK5Q6ZS86 529 aa10.81□□□□□ -0.68
AMBRA1-207ENST00000529553 MAATS1Q7Z4T9 603 aa10.81□□□□□ -0.68
AMBRA1-207ENST00000529553 PLD3Q8IV08 490 aa10.81□□□□□ -0.68
AMBRA1-207ENST00000529553 CCDC50Q8IVM0 306 aa10.81□□□□□ -0.68
AMBRA1-207ENST00000529553 CYP4X1Q8N118 509 aa10.81□□□□□ -0.68
AMBRA1-207ENST00000529553 APCDD1LQ8NCL9 501 aa10.81□□□□□ -0.68
AMBRA1-207ENST00000529553 PTCHD1Q96NR3 888 aa10.81□□□□□ -0.68
AMBRA1-207ENST00000529553 PRAP1Q96NZ9 151 aa10.81□□□□□ -0.68
AMBRA1-207ENST00000529553 YIPF4Q9BSR8 244 aa10.81□□□□□ -0.68
AMBRA1-207ENST00000529553 CLK4Q9HAZ1 481 aaKnown RBP10.81□□□□□ -0.68
AMBRA1-207ENST00000529553 IL1RL2Q9HB29 575 aa10.81□□□□□ -0.68
AMBRA1-207ENST00000529553 KCMF1Q9P0J7 381 aa10.81□□□□□ -0.68
AMBRA1-207ENST00000529553 ERVK-11Q9UQG0 969 aa10.81□□□□□ -0.68
AMBRA1-207ENST00000529553 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.81□□□□□ -0.68
AMBRA1-207ENST00000529553 NAALAD2Q9Y3Q0 740 aa10.81□□□□□ -0.68
AMBRA1-207ENST00000529553 PCDHA3Q9Y5H8 950 aa10.81□□□□□ -0.68
AMBRA1-207ENST00000529553 TCRBV16S1A1N1A0A5B0 115 aa10.8□□□□□ -0.68
AMBRA1-207ENST00000529553 PINLYPA6NC86 204 aa10.8□□□□□ -0.68
AMBRA1-207ENST00000529553 PSIP1O75475 530 aaKnown RBP10.8□□□□□ -0.68
AMBRA1-207ENST00000529553 F12P00748 615 aaPredicted RBP10.8□□□□□ -0.68
AMBRA1-207ENST00000529553 BMP5P22003 454 aa10.8□□□□□ -0.68
AMBRA1-207ENST00000529553 CEACAM8P31997 349 aaPredicted RBP10.8□□□□□ -0.68
AMBRA1-207ENST00000529553 SKP1P63208 163 aa10.8□□□□□ -0.68
AMBRA1-207ENST00000529553 CDH17Q12864 832 aa10.8□□□□□ -0.68
AMBRA1-207ENST00000529553 TSTA3Q13630 321 aaPredicted RBP10.8□□□□□ -0.68
AMBRA1-207ENST00000529553 TERF2Q15554 542 aa10.8□□□□□ -0.68
AMBRA1-207ENST00000529553 TYSND1Q2T9J0 566 aa10.8□□□□□ -0.68
AMBRA1-207ENST00000529553 EEF1AKMT2Q5JPI9 291 aaKnown RBP10.8□□□□□ -0.68
AMBRA1-207ENST00000529553 FBXW8Q8N3Y1 598 aa10.8□□□□□ -0.68
AMBRA1-207ENST00000529553 AFAP1L2Q8N4X5 818 aa10.8□□□□□ -0.68
AMBRA1-207ENST00000529553 TMEM251Q8N6I4 163 aa10.8□□□□□ -0.68
AMBRA1-207ENST00000529553 RELL2Q8NC24 303 aaPredicted RBP10.8□□□□□ -0.68
AMBRA1-207ENST00000529553 FBXO15Q8NCQ5 510 aaPredicted RBP10.8□□□□□ -0.68
AMBRA1-207ENST00000529553 B3GNT7Q8NFL0 401 aa10.8□□□□□ -0.68
AMBRA1-207ENST00000529553 SMPDL3BQ92485 455 aa10.8□□□□□ -0.68
AMBRA1-207ENST00000529553 ZNF592Q92610 1267 aa10.8□□□□□ -0.68
AMBRA1-207ENST00000529553 PKP4Q99569 1192 aa10.8□□□□□ -0.68
AMBRA1-207ENST00000529553 FAM173AQ9BQD7 235 aa10.8□□□□□ -0.68
AMBRA1-207ENST00000529553 LMBRD1Q9NUN5 540 aa10.8□□□□□ -0.68
AMBRA1-207ENST00000529553 ALKBH4Q9NXW9 302 aa10.8□□□□□ -0.68
AMBRA1-207ENST00000529553 SLC2A6Q9UGQ3 507 aa10.8□□□□□ -0.68
AMBRA1-207ENST00000529553 PPIEQ9UNP9 301 aaKnown RBP10.8□□□□□ -0.68
AMBRA1-207ENST00000529553 RUVBL2Q9Y230 463 aaKnown RBP10.8□□□□□ -0.68
AMBRA1-207ENST00000529553 TLN2Q9Y4G6 2542 aa10.8□□□□□ -0.68
AMBRA1-207ENST00000529553 A8MVJ9 347 aa10.79□□□□□ -0.68
AMBRA1-207ENST00000529553 SMAPO00193 183 aa10.79□□□□□ -0.68
AMBRA1-207ENST00000529553 CD3EAPO15446 510 aaKnown RBP10.79□□□□□ -0.68
AMBRA1-207ENST00000529553 METTL18O95568 372 aa10.79□□□□□ -0.68
AMBRA1-207ENST00000529553 SLC16A8O95907 504 aa10.79□□□□□ -0.68
AMBRA1-207ENST00000529553 EPPINO95925 133 aa10.79□□□□□ -0.68
AMBRA1-207ENST00000529553 CATP04040 527 aaKnown RBP10.79□□□□□ -0.68
AMBRA1-207ENST00000529553 TIMP3P35625 211 aa10.79□□□□□ -0.68
AMBRA1-207ENST00000529553 MAGEA5P43359 124 aa10.79□□□□□ -0.68
AMBRA1-207ENST00000529553 HADHBP55084 474 aaKnown RBP10.79□□□□□ -0.68
AMBRA1-207ENST00000529553 PRAMEP78395 509 aa10.79□□□□□ -0.68
AMBRA1-207ENST00000529553 CBLBQ13191 982 aa10.79□□□□□ -0.68
AMBRA1-207ENST00000529553 P3H1Q32P28 736 aa10.79□□□□□ -0.68
AMBRA1-207ENST00000529553 HMBOX1Q6NT76 420 aa10.79□□□□□ -0.68
AMBRA1-207ENST00000529553 POMZP3Q6PJE2 187 aa10.79□□□□□ -0.68
AMBRA1-207ENST00000529553 SEM1Q6ZVN7 128 aa10.79□□□□□ -0.68
AMBRA1-207ENST00000529553 YTHDF3Q7Z739 585 aaKnown RBP10.79□□□□□ -0.68
AMBRA1-207ENST00000529553 MPP5Q8N3R9 675 aa10.79□□□□□ -0.68
AMBRA1-207ENST00000529553 KCT2Q8NC54 265 aa10.79□□□□□ -0.68
AMBRA1-207ENST00000529553 LINC01560Q8TB33 94 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms