RNA–Protein interactions for RNA: ENST00000529545.1

VPS11-203, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 576 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-203ENST00000529545 GRK3P35626 688 aa8.42□□□□□ -1.06
VPS11-203ENST00000529545 RFC3P40938 356 aa8.42□□□□□ -1.06
VPS11-203ENST00000529545 GRIA1P42261 906 aa8.42□□□□□ -1.06
VPS11-203ENST00000529545 NUP107P57740 925 aa8.42□□□□□ -1.06
VPS11-203ENST00000529545 SESN2P58004 480 aaPredicted RBP8.42□□□□□ -1.06
VPS11-203ENST00000529545 MLF1P58340 268 aa8.42□□□□□ -1.06
VPS11-203ENST00000529545 RHAGQ02094 409 aa8.42□□□□□ -1.06
VPS11-203ENST00000529545 HERC3Q15034 1050 aa8.42□□□□□ -1.06
VPS11-203ENST00000529545 ACSBG2Q5FVE4 666 aa8.42□□□□□ -1.06
VPS11-203ENST00000529545 CTSL3PQ5NE16 218 aa8.42□□□□□ -1.06
VPS11-203ENST00000529545 LCE2CQ5TA81 110 aa8.42□□□□□ -1.06
VPS11-203ENST00000529545 PRSS41Q7RTY9 318 aa8.42□□□□□ -1.06
VPS11-203ENST00000529545 VN1R4Q7Z5H5 301 aa8.42□□□□□ -1.06
VPS11-203ENST00000529545 ASPGQ86U10 573 aa8.42□□□□□ -1.06
VPS11-203ENST00000529545 CCDC170Q8IYT3 715 aa8.42□□□□□ -1.06
VPS11-203ENST00000529545 KIF2BQ8N4N8 673 aa8.42□□□□□ -1.06
VPS11-203ENST00000529545 C16orf52Q8NHV5 167 aa8.42□□□□□ -1.06
VPS11-203ENST00000529545 ZNF480Q8WV37 535 aa8.42□□□□□ -1.06
VPS11-203ENST00000529545 SLC13A3Q8WWT9 602 aa8.42□□□□□ -1.06
VPS11-203ENST00000529545 ALG3Q92685 438 aa8.42□□□□□ -1.06
VPS11-203ENST00000529545 TSLPQ969D9 159 aa8.42□□□□□ -1.06
VPS11-203ENST00000529545 RMND5BQ96G75 393 aaPredicted RBP8.42□□□□□ -1.06
VPS11-203ENST00000529545 TCF12Q99081 682 aa8.42□□□□□ -1.06
VPS11-203ENST00000529545 RBCK1Q9BYM8 510 aa8.42□□□□□ -1.06
VPS11-203ENST00000529545 DEFB126Q9BYW3 111 aa8.42□□□□□ -1.06
VPS11-203ENST00000529545 PCBD2Q9H0N5 130 aa8.42□□□□□ -1.06
VPS11-203ENST00000529545 GSX1Q9H4S2 264 aaPredicted RBP8.42□□□□□ -1.06
VPS11-203ENST00000529545 CCDC177Q9NQR7 707 aaPredicted RBP8.42□□□□□ -1.06
VPS11-203ENST00000529545 RAB6BQ9NRW1 208 aa8.42□□□□□ -1.06
VPS11-203ENST00000529545 AMFRQ9UKV5 643 aa8.42□□□□□ -1.06
VPS11-203ENST00000529545 NAALAD2Q9Y3Q0 740 aa8.42□□□□□ -1.06
VPS11-203ENST00000529545 SLC22A7Q9Y694 548 aa8.42□□□□□ -1.06
VPS11-203ENST00000529545 ABCA4P78363 2273 aa8.41□□□□□ -1.06
VPS11-203ENST00000529545 PHF3Q92576 2039 aaKnown RBP8.41□□□□□ -1.06
VPS11-203ENST00000529545 FIGNL2A6NMB9 653 aa8.41□□□□□ -1.06
VPS11-203ENST00000529545 ACOT7O00154 380 aa8.41□□□□□ -1.06
VPS11-203ENST00000529545 CTAG2O75638 210 aa8.41□□□□□ -1.06
VPS11-203ENST00000529545 VAPBO95292 243 aa8.41□□□□□ -1.06
VPS11-203ENST00000529545 VSIG8P0DPA2 414 aa8.41□□□□□ -1.06
VPS11-203ENST00000529545 PEX19P40855 299 aa8.41□□□□□ -1.06
VPS11-203ENST00000529545 ZFP36L2P47974 494 aaKnown RBP8.41□□□□□ -1.06
VPS11-203ENST00000529545 PLGLB1Q02325 96 aa8.41□□□□□ -1.06
VPS11-203ENST00000529545 LTBQ06643 244 aa8.41□□□□□ -1.06
VPS11-203ENST00000529545 CBLBQ13191 982 aa8.41□□□□□ -1.06
VPS11-203ENST00000529545 GBX1Q14549 363 aa8.41□□□□□ -1.06
VPS11-203ENST00000529545 CMPK2Q5EBM0 449 aa8.41□□□□□ -1.06
VPS11-203ENST00000529545 NIPAL1Q6NVV3 410 aa8.41□□□□□ -1.06
VPS11-203ENST00000529545 PEX26Q7Z412 305 aa8.41□□□□□ -1.06
VPS11-203ENST00000529545 CAMKMTQ7Z624 323 aa8.41□□□□□ -1.06
VPS11-203ENST00000529545 BIVMQ86UB2 503 aa8.41□□□□□ -1.06
VPS11-203ENST00000529545 REXO1L1PQ8IX06 675 aa8.41□□□□□ -1.06
VPS11-203ENST00000529545 CYP4Z2PQ8N1L4 340 aa8.41□□□□□ -1.06
VPS11-203ENST00000529545 CCDC89Q8N998 374 aa8.41□□□□□ -1.06
VPS11-203ENST00000529545 ZFP62Q8NB50 900 aaPredicted RBP8.41□□□□□ -1.06
VPS11-203ENST00000529545 FBXO15Q8NCQ5 510 aaPredicted RBP8.41□□□□□ -1.06
VPS11-203ENST00000529545 CREB3L4Q8TEY5 395 aa8.41□□□□□ -1.06
VPS11-203ENST00000529545 TBC1D20Q96BZ9 403 aa8.41□□□□□ -1.06
VPS11-203ENST00000529545 PTCHD1Q96NR3 888 aa8.41□□□□□ -1.06
VPS11-203ENST00000529545 BIRC8Q96P09 236 aa8.41□□□□□ -1.06
VPS11-203ENST00000529545 ALPK1Q96QP1 1244 aa8.41□□□□□ -1.06
VPS11-203ENST00000529545 MACROD1Q9BQ69 325 aa8.41□□□□□ -1.06
VPS11-203ENST00000529545 IL22Q9GZX6 179 aa8.41□□□□□ -1.06
VPS11-203ENST00000529545 DEFB127Q9H1M4 99 aa8.41□□□□□ -1.06
VPS11-203ENST00000529545 CLEC4MQ9H2X3 399 aaPredicted RBP8.41□□□□□ -1.06
VPS11-203ENST00000529545 TIMMDC1Q9NPL8 285 aa8.41□□□□□ -1.06
VPS11-203ENST00000529545 LANCL2Q9NS86 450 aa8.41□□□□□ -1.06
VPS11-203ENST00000529545 TREX1Q9NSU2 369 aa8.41□□□□□ -1.06
VPS11-203ENST00000529545 BFARQ9NZS9 450 aa8.41□□□□□ -1.06
VPS11-203ENST00000529545 ERVK-11Q9UQG0 969 aa8.41□□□□□ -1.06
VPS11-203ENST00000529545 ZNF148Q9UQR1 794 aa8.41□□□□□ -1.06
VPS11-203ENST00000529545 DRG1Q9Y295 367 aaKnown RBP8.41□□□□□ -1.06
VPS11-203ENST00000529545 CRYL1Q9Y2S2 319 aa8.41□□□□□ -1.06
VPS11-203ENST00000529545 HRH3Q9Y5N1 445 aa8.41□□□□□ -1.06
VPS11-203ENST00000529545 ZNF860A6NHJ4 632 aa8.4□□□□□ -1.06
VPS11-203ENST00000529545 SAGE2PA6NJ88 616 aa8.4□□□□□ -1.06
VPS11-203ENST00000529545 MIF4GDA9UHW6 222 aaKnown RBP8.4□□□□□ -1.06
VPS11-203ENST00000529545 FAM47E-STBD1D6RA91 191 aa8.4□□□□□ -1.06
VPS11-203ENST00000529545 NPIPA2E9PIF3 369 aa8.4□□□□□ -1.06
VPS11-203ENST00000529545 NPIPA3F8WFD2 350 aa8.4□□□□□ -1.06
VPS11-203ENST00000529545 PSMD12O00232 456 aaPredicted RBP8.4□□□□□ -1.06
VPS11-203ENST00000529545 BCKDKO14874 412 aa8.4□□□□□ -1.06
VPS11-203ENST00000529545 B4GALT2O60909 372 aa8.4□□□□□ -1.06
VPS11-203ENST00000529545 TUBB4AP04350 444 aa8.4□□□□□ -1.06
VPS11-203ENST00000529545 FBXO45P0C2W1 286 aa8.4□□□□□ -1.06
VPS11-203ENST00000529545 ACVR2AP27037 513 aa8.4□□□□□ -1.06
VPS11-203ENST00000529545 NMBRP28336 390 aa8.4□□□□□ -1.06
VPS11-203ENST00000529545 KIR2DL3P43628 341 aa8.4□□□□□ -1.06
VPS11-203ENST00000529545 NPY2RP49146 381 aa8.4□□□□□ -1.06
VPS11-203ENST00000529545 ADARP55265 1226 aaKnown RBP8.4□□□□□ -1.06
VPS11-203ENST00000529545 GPR85P60893 370 aa8.4□□□□□ -1.06
VPS11-203ENST00000529545 PPIAP62937 165 aaKnown RBP8.4□□□□□ -1.06
VPS11-203ENST00000529545 SNRPNP63162 240 aaKnown RBP8.4□□□□□ -1.06
VPS11-203ENST00000529545 KLF1Q13351 362 aaPredicted RBP8.4□□□□□ -1.06
VPS11-203ENST00000529545 KCNJ11Q14654 390 aa8.4□□□□□ -1.06
VPS11-203ENST00000529545 GXYLT1Q4G148 440 aa8.4□□□□□ -1.06
VPS11-203ENST00000529545 CAPN13Q6MZZ7 669 aaPredicted RBP8.4□□□□□ -1.06
VPS11-203ENST00000529545 ARSKQ6UWY0 536 aa8.4□□□□□ -1.06
VPS11-203ENST00000529545 RGS9BPQ6ZS82 235 aa8.4□□□□□ -1.06
VPS11-203ENST00000529545 SLC26A11Q86WA9 606 aa8.4□□□□□ -1.06
VPS11-203ENST00000529545 C17orf64Q86WR6 236 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms