RNA–Protein interactions for RNA: ENST00000528484.5

CMTM1-211, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 726 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-211ENST00000528484 SLC6A16Q9GZN6 736 aa10.83□□□□□ -0.68
CMTM1-211ENST00000528484 TIMMDC1Q9NPL8 285 aa10.83□□□□□ -0.68
CMTM1-211ENST00000528484 SYBUQ9NX95 663 aa10.83□□□□□ -0.68
CMTM1-211ENST00000528484 SOX13Q9UN79 622 aa10.83□□□□□ -0.68
CMTM1-211ENST00000528484 RNF6Q9Y252 685 aa10.83□□□□□ -0.68
CMTM1-211ENST00000528484 COMMD10Q9Y6G5 202 aa10.83□□□□□ -0.68
CMTM1-211ENST00000528484 DNHD1Q96M86 4753 aa10.82□□□□□ -0.68
CMTM1-211ENST00000528484 ABCA2Q9BZC7 2435 aa10.82□□□□□ -0.68
CMTM1-211ENST00000528484 NKX2-6A6NCS4 301 aa10.82□□□□□ -0.68
CMTM1-211ENST00000528484 SAGE2PA6NJ88 616 aa10.82□□□□□ -0.68
CMTM1-211ENST00000528484 FIGNL2A6NMB9 653 aa10.82□□□□□ -0.68
CMTM1-211ENST00000528484 GFYI3L273 518 aa10.82□□□□□ -0.68
CMTM1-211ENST00000528484 EIF3FO00303 357 aaPredicted RBP10.82□□□□□ -0.68
CMTM1-211ENST00000528484 PEX1O43933 1283 aa10.82□□□□□ -0.68
CMTM1-211ENST00000528484 B4GALT2O60909 372 aa10.82□□□□□ -0.68
CMTM1-211ENST00000528484 HOXD4P09016 255 aaPredicted RBP10.82□□□□□ -0.68
CMTM1-211ENST00000528484 HIST1H2AGP0C0S8 130 aaPredicted RBP10.82□□□□□ -0.68
CMTM1-211ENST00000528484 ZSCAN5DPP0CG00 497 aa10.82□□□□□ -0.68
CMTM1-211ENST00000528484 DRD2P14416 443 aa10.82□□□□□ -0.68
CMTM1-211ENST00000528484 ALOX12P18054 663 aa10.82□□□□□ -0.68
CMTM1-211ENST00000528484 IGFBP2P18065 325 aa10.82□□□□□ -0.68
CMTM1-211ENST00000528484 HIST1H2ADP20671 130 aa10.82□□□□□ -0.68
CMTM1-211ENST00000528484 ARNTP27540 789 aa10.82□□□□□ -0.68
CMTM1-211ENST00000528484 DNAJA1P31689 397 aaKnown RBP10.82□□□□□ -0.68
CMTM1-211ENST00000528484 RPL22P35268 128 aaKnown RBP10.82□□□□□ -0.68
CMTM1-211ENST00000528484 COILP38432 576 aaPredicted RBP10.82□□□□□ -0.68
CMTM1-211ENST00000528484 RGS4P49798 205 aa10.82□□□□□ -0.68
CMTM1-211ENST00000528484 RNFT1Q5M7Z0 435 aa10.82□□□□□ -0.68
CMTM1-211ENST00000528484 ZNF468Q5VIY5 522 aaPredicted RBP10.82□□□□□ -0.68
CMTM1-211ENST00000528484 UGT3A1Q6NUS8 523 aa10.82□□□□□ -0.68
CMTM1-211ENST00000528484 QSOX2Q6ZRP7 698 aa10.82□□□□□ -0.68
CMTM1-211ENST00000528484 PRUNE1Q86TP1 453 aa10.82□□□□□ -0.68
CMTM1-211ENST00000528484 SULF2Q8IWU5 870 aa10.82□□□□□ -0.68
CMTM1-211ENST00000528484 KIF2BQ8N4N8 673 aa10.82□□□□□ -0.68
CMTM1-211ENST00000528484 GPATCH11Q8N954 259 aa10.82□□□□□ -0.68
CMTM1-211ENST00000528484 OR10Q1Q8NGQ4 319 aa10.82□□□□□ -0.68
CMTM1-211ENST00000528484 CREB3L4Q8TEY5 395 aa10.82□□□□□ -0.68
CMTM1-211ENST00000528484 MAIP1Q8WWC4 291 aa10.82□□□□□ -0.68
CMTM1-211ENST00000528484 TM4SF19Q96DZ7 209 aa10.82□□□□□ -0.68
CMTM1-211ENST00000528484 HIST1H2AHQ96KK5 128 aa10.82□□□□□ -0.68
CMTM1-211ENST00000528484 HIST1H2AJQ99878 128 aa10.82□□□□□ -0.68
CMTM1-211ENST00000528484 FOXC2Q99958 501 aa10.82□□□□□ -0.68
CMTM1-211ENST00000528484 CCDC77Q9BR77 488 aa10.82□□□□□ -0.68
CMTM1-211ENST00000528484 HAUS8Q9BT25 410 aa10.82□□□□□ -0.68
CMTM1-211ENST00000528484 H2AFJQ9BTM1 129 aa10.82□□□□□ -0.68
CMTM1-211ENST00000528484 TRIM45Q9H8W5 580 aaPredicted RBP10.82□□□□□ -0.68
CMTM1-211ENST00000528484 NPDC1Q9NQX5 325 aaPredicted RBP10.82□□□□□ -0.68
CMTM1-211ENST00000528484 LANCL2Q9NS86 450 aa10.82□□□□□ -0.68
CMTM1-211ENST00000528484 GALPQ9UBC7 116 aa10.82□□□□□ -0.68
CMTM1-211ENST00000528484 ERVK-11Q9UQG0 969 aa10.82□□□□□ -0.68
CMTM1-211ENST00000528484 ANKHD1Q8IWZ3 2542 aaKnown RBP10.81□□□□□ -0.68
CMTM1-211ENST00000528484 ABCA4P78363 2273 aa10.81□□□□□ -0.68
CMTM1-211ENST00000528484 MAGEB16A2A368 324 aa10.81□□□□□ -0.68
CMTM1-211ENST00000528484 FAM47E-STBD1D6RA91 191 aa10.81□□□□□ -0.68
CMTM1-211ENST00000528484 OR1F1O43749 312 aa10.81□□□□□ -0.68
CMTM1-211ENST00000528484 CEP104O60308 925 aa10.81□□□□□ -0.68
CMTM1-211ENST00000528484 AVILO75366 819 aa10.81□□□□□ -0.68
CMTM1-211ENST00000528484 FAM155BO75949 473 aa10.81□□□□□ -0.68
CMTM1-211ENST00000528484 TUBB4AP04350 444 aa10.81□□□□□ -0.68
CMTM1-211ENST00000528484 C8GP07360 202 aa10.81□□□□□ -0.68
CMTM1-211ENST00000528484 TPSB2P20231 275 aa10.81□□□□□ -0.68
CMTM1-211ENST00000528484 RFC3P40938 356 aa10.81□□□□□ -0.68
CMTM1-211ENST00000528484 CCR8P51685 355 aa10.81□□□□□ -0.68
CMTM1-211ENST00000528484 CLCN2P51788 898 aa10.81□□□□□ -0.68
CMTM1-211ENST00000528484 PLGLB1Q02325 96 aa10.81□□□□□ -0.68
CMTM1-211ENST00000528484 PMPCAQ10713 525 aa10.81□□□□□ -0.68
CMTM1-211ENST00000528484 PWP1Q13610 501 aa10.81□□□□□ -0.68
CMTM1-211ENST00000528484 DHX34Q14147 1143 aaKnown RBP10.81□□□□□ -0.68
CMTM1-211ENST00000528484 TPSAB1Q15661 275 aa10.81□□□□□ -0.68
CMTM1-211ENST00000528484 CCNG2Q16589 344 aa10.81□□□□□ -0.68
CMTM1-211ENST00000528484 PHKG1Q16816 387 aa10.81□□□□□ -0.68
CMTM1-211ENST00000528484 DEFB134Q4QY38 66 aa10.81□□□□□ -0.68
CMTM1-211ENST00000528484 FGD2Q7Z6J4 655 aa10.81□□□□□ -0.68
CMTM1-211ENST00000528484 PDSS2Q86YH6 399 aa10.81□□□□□ -0.68
CMTM1-211ENST00000528484 CHERPQ8IWX8 916 aaKnown RBP10.81□□□□□ -0.68
CMTM1-211ENST00000528484 LRRC56Q8IYG6 542 aaPredicted RBP10.81□□□□□ -0.68
CMTM1-211ENST00000528484 MFSD9Q8NBP5 474 aa10.81□□□□□ -0.68
CMTM1-211ENST00000528484 OR5T3Q8NGG3 340 aa10.81□□□□□ -0.68
CMTM1-211ENST00000528484 C16orf52Q8NHV5 167 aa10.81□□□□□ -0.68
CMTM1-211ENST00000528484 GABPB2Q8TAK5 448 aaPredicted RBP10.81□□□□□ -0.68
CMTM1-211ENST00000528484 CALML6Q8TD86 181 aa10.81□□□□□ -0.68
CMTM1-211ENST00000528484 TMUB1Q9BVT8 246 aa10.81□□□□□ -0.68
CMTM1-211ENST00000528484 UCK2Q9BZX2 261 aa10.81□□□□□ -0.68
CMTM1-211ENST00000528484 CLK4Q9HAZ1 481 aaKnown RBP10.81□□□□□ -0.68
CMTM1-211ENST00000528484 DNAJB12Q9NXW2 375 aaKnown RBP10.81□□□□□ -0.68
CMTM1-211ENST00000528484 TRMT6Q9UJA5 497 aaKnown RBP10.81□□□□□ -0.68
CMTM1-211ENST00000528484 FBXW2Q9UKT8 454 aa10.81□□□□□ -0.68
CMTM1-211ENST00000528484 DHRS7Q9Y394 339 aa10.81□□□□□ -0.68
CMTM1-211ENST00000528484 REXO2Q9Y3B8 237 aaKnown RBP10.81□□□□□ -0.68
CMTM1-211ENST00000528484 HCFC1P51610 2035 aa10.8□□□□□ -0.68
CMTM1-211ENST00000528484 FAM237BA0A1B0GVD1 139 aa10.8□□□□□ -0.68
CMTM1-211ENST00000528484 A8MVJ9 347 aa10.8□□□□□ -0.68
CMTM1-211ENST00000528484 CHST10O43529 356 aa10.8□□□□□ -0.68
CMTM1-211ENST00000528484 GALR3O60755 368 aaPredicted RBP10.8□□□□□ -0.68
CMTM1-211ENST00000528484 PDE9AO76083 593 aa10.8□□□□□ -0.68
CMTM1-211ENST00000528484 TOXO94900 526 aa10.8□□□□□ -0.68
CMTM1-211ENST00000528484 CDH1P12830 882 aa10.8□□□□□ -0.68
CMTM1-211ENST00000528484 RNH1P13489 461 aaKnown RBP10.8□□□□□ -0.68
CMTM1-211ENST00000528484 DNASE1P24855 282 aa10.8□□□□□ -0.68
CMTM1-211ENST00000528484 PEX19P40855 299 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms