RNA–Protein interactions for RNA: ENST00000527720.5

USH1C-207, Transcript of USH1 protein network component harmonin, humanhuman

TSL 1 (best) BASIC

Gene USH1C, Length 2,278 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-207ENST00000527720 DDX59Q5T1V6 619 aaKnown RBP eCLIP14.73□□□□□ -0.05
USH1C-207ENST00000527720 GALNT10Q86SR1 603 aa14.73□□□□□ -0.05
USH1C-207ENST00000527720 TSPYL5Q86VY4 417 aaPredicted RBP14.73□□□□□ -0.05
USH1C-207ENST00000527720 DCUN1D3Q8IWE4 304 aa14.73□□□□□ -0.05
USH1C-207ENST00000527720 NAGSQ8N159 534 aa14.73□□□□□ -0.05
USH1C-207ENST00000527720 SUSD6Q92537 303 aa14.73□□□□□ -0.05
USH1C-207ENST00000527720 TPD52L3Q96J77 140 aa14.73□□□□□ -0.05
USH1C-207ENST00000527720 ZFYVE19Q96K21 471 aa14.73□□□□□ -0.05
USH1C-207ENST00000527720 NAA50Q9GZZ1 169 aaKnown RBP14.73□□□□□ -0.05
USH1C-207ENST00000527720 RIBC2Q9H4K1 309 aa14.73□□□□□ -0.05
USH1C-207ENST00000527720 TMEM38AQ9H6F2 299 aa14.73□□□□□ -0.05
USH1C-207ENST00000527720 THUMPD1Q9NXG2 353 aaKnown RBP14.73□□□□□ -0.05
USH1C-207ENST00000527720 KIF17Q9P2E2 1029 aa14.73□□□□□ -0.05
USH1C-207ENST00000527720 TPRKBQ9Y3C4 175 aa14.73□□□□□ -0.05
USH1C-207ENST00000527720 PCDHGB3Q9Y5G1 929 aa14.73□□□□□ -0.05
USH1C-207ENST00000527720 A0A1W2PPW3 197 aa14.72□□□□□ -0.05
USH1C-207ENST00000527720 OTOL1A6NHN0 477 aaPredicted RBP14.72□□□□□ -0.05
USH1C-207ENST00000527720 MRPS14O60783 128 aaKnown RBP14.72□□□□□ -0.05
USH1C-207ENST00000527720 TNFRSF21O75509 655 aa14.72□□□□□ -0.05
USH1C-207ENST00000527720 RPN2P04844 631 aa14.72□□□□□ -0.05
USH1C-207ENST00000527720 ERGP11308 486 aa14.72□□□□□ -0.05
USH1C-207ENST00000527720 HSD17B2P37059 387 aa14.72□□□□□ -0.05
USH1C-207ENST00000527720 CLK3P49761 638 aaKnown RBP14.72□□□□□ -0.05
USH1C-207ENST00000527720 C2orf80Q0P641 193 aa14.72□□□□□ -0.05
USH1C-207ENST00000527720 NFATC3Q12968 1075 aa14.72□□□□□ -0.05
USH1C-207ENST00000527720 CRTC3Q6UUV7 619 aa14.72□□□□□ -0.05
USH1C-207ENST00000527720 TMIGD1Q6UXZ0 262 aa14.72□□□□□ -0.05
USH1C-207ENST00000527720 EP400NLQ6ZTU2 488 aa14.72□□□□□ -0.05
USH1C-207ENST00000527720 SPRED2Q7Z698 418 aa14.72□□□□□ -0.05
USH1C-207ENST00000527720 GALNT5Q7Z7M9 940 aa14.72□□□□□ -0.05
USH1C-207ENST00000527720 ZC3H7AQ8IWR0 971 aaKnown RBP14.72□□□□□ -0.05
USH1C-207ENST00000527720 OXR1Q8N573 874 aa14.72□□□□□ -0.05
USH1C-207ENST00000527720 TTC29Q8NA56 475 aaPredicted RBP14.72□□□□□ -0.05
USH1C-207ENST00000527720 SLC35A5Q9BS91 424 aa14.72□□□□□ -0.05
USH1C-207ENST00000527720 OR51B5Q9H339 312 aa14.72□□□□□ -0.05
USH1C-207ENST00000527720 KRT84Q9NSB2 600 aa14.72□□□□□ -0.05
USH1C-207ENST00000527720 NDRG4Q9ULP0 352 aaKnown RBP14.72□□□□□ -0.05
USH1C-207ENST00000527720 ASF1AQ9Y294 204 aa14.72□□□□□ -0.05
USH1C-207ENST00000527720 GMPPBQ9Y5P6 360 aa14.72□□□□□ -0.05
USH1C-207ENST00000527720 DNMT3AQ9Y6K1 912 aaPredicted RBP14.72□□□□□ -0.05
USH1C-207ENST00000527720 TRPM6Q9BX84 2022 aa14.72□□□□□ -0.05
USH1C-207ENST00000527720 NUMA1Q14980 2115 aa14.72□□□□□ -0.05
USH1C-207ENST00000527720 ANKRD33BA6NCL7 494 aa14.72□□□□□ -0.05
USH1C-207ENST00000527720 PLK4O00444 970 aa14.72□□□□□ -0.05
USH1C-207ENST00000527720 DIRAS1O95057 198 aa14.72□□□□□ -0.05
USH1C-207ENST00000527720 NTRK1P04629 796 aa14.72□□□□□ -0.05
USH1C-207ENST00000527720 PCMT1P22061 227 aa14.72□□□□□ -0.05
USH1C-207ENST00000527720 P2RY2P41231 377 aa14.72□□□□□ -0.05
USH1C-207ENST00000527720 CRATP43155 626 aa14.72□□□□□ -0.05
USH1C-207ENST00000527720 PLA2G16P53816 162 aa14.72□□□□□ -0.05
USH1C-207ENST00000527720 CYP2A13Q16696 494 aa14.72□□□□□ -0.05
USH1C-207ENST00000527720 FGD3Q5JSP0 725 aa14.72□□□□□ -0.05
USH1C-207ENST00000527720 GCNT6Q5T4J0 391 aa14.72□□□□□ -0.05
USH1C-207ENST00000527720 KIAA1614Q5VZ46 1190 aa14.72□□□□□ -0.05
USH1C-207ENST00000527720 TRIM40Q6P9F5 258 aa14.72□□□□□ -0.05
USH1C-207ENST00000527720 CCDC80Q76M96 950 aa14.72□□□□□ -0.05
USH1C-207ENST00000527720 AMZ2Q86W34 360 aa14.72□□□□□ -0.05
USH1C-207ENST00000527720 FAM129CQ86XR2 697 aa14.72□□□□□ -0.05
USH1C-207ENST00000527720 MMAAQ8IVH4 418 aaKnown RBP14.72□□□□□ -0.05
USH1C-207ENST00000527720 MTIF3Q9H2K0 278 aaKnown RBP14.72□□□□□ -0.05
USH1C-207ENST00000527720 ETAA1Q9NY74 926 aa14.72□□□□□ -0.05
USH1C-207ENST00000527720 AHSPQ9NZD4 102 aa14.72□□□□□ -0.05
USH1C-207ENST00000527720 PSME2Q9UL46 239 aa14.72□□□□□ -0.05
USH1C-207ENST00000527720 WBP11Q9Y2W2 641 aaKnown RBP14.72□□□□□ -0.05
USH1C-207ENST00000527720 HEMK1Q9Y5R4 338 aaPredicted RBP14.72□□□□□ -0.05
USH1C-207ENST00000527720 E9PQ18 207 aa14.71□□□□□ -0.05
USH1C-207ENST00000527720 ADAMDEC1O15204 470 aa14.71□□□□□ -0.05
USH1C-207ENST00000527720 C6orf47O95873 294 aa14.71□□□□□ -0.05
USH1C-207ENST00000527720 CAMK2GQ13555 558 aaPredicted RBP14.71□□□□□ -0.05
USH1C-207ENST00000527720 FAM46CQ5VWP2 391 aa14.71□□□□□ -0.05
USH1C-207ENST00000527720 FAM83HQ6ZRV2 1179 aaPredicted RBP14.71□□□□□ -0.05
USH1C-207ENST00000527720 ATG16L2Q8NAA4 619 aa14.71□□□□□ -0.05
USH1C-207ENST00000527720 BPIFB6Q8NFQ5 453 aa14.71□□□□□ -0.05
USH1C-207ENST00000527720 OR4K1Q8NGD4 311 aa14.71□□□□□ -0.05
USH1C-207ENST00000527720 WDR48Q8TAF3 677 aa14.71□□□□□ -0.05
USH1C-207ENST00000527720 SGCDQ92629 289 aa14.71□□□□□ -0.05
USH1C-207ENST00000527720 ZNF347Q96SE7 839 aa14.71□□□□□ -0.05
USH1C-207ENST00000527720 PITX2Q99697 317 aa14.71□□□□□ -0.05
USH1C-207ENST00000527720 BCL7BQ9BQE9 202 aa14.71□□□□□ -0.05
USH1C-207ENST00000527720 SPNS1Q9H2V7 528 aa14.71□□□□□ -0.05
USH1C-207ENST00000527720 DUSP21Q9H596 190 aa14.71□□□□□ -0.05
USH1C-207ENST00000527720 PELI2Q9HAT8 420 aa14.71□□□□□ -0.05
USH1C-207ENST00000527720 GPATCH2Q9NW75 528 aa14.71□□□□□ -0.05
USH1C-207ENST00000527720 SCN3BQ9NY72 215 aa14.71□□□□□ -0.05
USH1C-207ENST00000527720 TAS2R9Q9NYW1 312 aa14.71□□□□□ -0.05
USH1C-207ENST00000527720 KLHL33A6NCF5 533 aa14.71□□□□□ -0.06
USH1C-207ENST00000527720 TMEM229AB2RXF0 380 aa14.71□□□□□ -0.06
USH1C-207ENST00000527720 GCM2O75603 506 aaPredicted RBP14.71□□□□□ -0.06
USH1C-207ENST00000527720 SEMA3DO95025 777 aa14.71□□□□□ -0.06
USH1C-207ENST00000527720 STT3AP46977 705 aa14.71□□□□□ -0.06
USH1C-207ENST00000527720 TAS2R50P59544 299 aa14.71□□□□□ -0.06
USH1C-207ENST00000527720 SIM2Q14190 667 aaPredicted RBP14.71□□□□□ -0.06
USH1C-207ENST00000527720 LAPTM4AQ15012 233 aa14.71□□□□□ -0.06
USH1C-207ENST00000527720 PNCKQ6P2M8 343 aa14.71□□□□□ -0.06
USH1C-207ENST00000527720 TMC5Q6UXY8 1006 aa14.71□□□□□ -0.06
USH1C-207ENST00000527720 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.71□□□□□ -0.06
USH1C-207ENST00000527720 NATD1Q8N6N6 113 aa14.71□□□□□ -0.06
USH1C-207ENST00000527720 CNIH3Q8TBE1 160 aa14.71□□□□□ -0.06
USH1C-207ENST00000527720 LZICQ8WZA0 190 aa14.71□□□□□ -0.06
USH1C-207ENST00000527720 MAL2Q969L2 176 aa14.71□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 99.9 ms