RNA–Protein interactions for RNA: ENST00000527189.5

CAPN1-207, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 558 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-207ENST00000527189 DERL2Q9GZP9 239 aa12.63□□□□□ -0.39
CAPN1-207ENST00000527189 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.63□□□□□ -0.39
CAPN1-207ENST00000527189 GPAMQ9HCL2 828 aa12.63□□□□□ -0.39
CAPN1-207ENST00000527189 MMP25Q9NPA2 562 aa12.63□□□□□ -0.39
CAPN1-207ENST00000527189 LANCL2Q9NS86 450 aa12.63□□□□□ -0.39
CAPN1-207ENST00000527189 OLAHQ9NV23 265 aa12.63□□□□□ -0.39
CAPN1-207ENST00000527189 PLA2G3Q9NZ20 509 aa12.63□□□□□ -0.39
CAPN1-207ENST00000527189 CTNNAL1Q9UBT7 734 aa12.63□□□□□ -0.39
CAPN1-207ENST00000527189 IKZF3Q9UKT9 509 aa12.63□□□□□ -0.39
CAPN1-207ENST00000527189 SLC22A14Q9Y267 594 aa12.63□□□□□ -0.39
CAPN1-207ENST00000527189 PCDHGB6Q9Y5F9 930 aa12.63□□□□□ -0.39
CAPN1-207ENST00000527189 OR5H15A6NDH6 313 aa12.62□□□□□ -0.39
CAPN1-207ENST00000527189 E2F3O00716 465 aa12.62□□□□□ -0.39
CAPN1-207ENST00000527189 H2AFYO75367 372 aaKnown RBP12.62□□□□□ -0.39
CAPN1-207ENST00000527189 SEC24DO94855 1032 aaPredicted RBP12.62□□□□□ -0.39
CAPN1-207ENST00000527189 FHP07954 510 aa12.62□□□□□ -0.39
CAPN1-207ENST00000527189 SERPINA6P08185 405 aa12.62□□□□□ -0.39
CAPN1-207ENST00000527189 GSTA2P09210 222 aa12.62□□□□□ -0.39
CAPN1-207ENST00000527189 SMIM10L1P0DMW3 83 aa12.62□□□□□ -0.39
CAPN1-207ENST00000527189 GNAZP19086 355 aa12.62□□□□□ -0.39
CAPN1-207ENST00000527189 GSTM2P28161 218 aa12.62□□□□□ -0.39
CAPN1-207ENST00000527189 REEP5Q00765 189 aa12.62□□□□□ -0.39
CAPN1-207ENST00000527189 RHAGQ02094 409 aa12.62□□□□□ -0.39
CAPN1-207ENST00000527189 CAV1Q03135 178 aa12.62□□□□□ -0.39
CAPN1-207ENST00000527189 ACTN3Q08043 901 aaPredicted RBP12.62□□□□□ -0.39
CAPN1-207ENST00000527189 ABRAXAS2Q15018 415 aa12.62□□□□□ -0.39
CAPN1-207ENST00000527189 BTBD16Q32M84 506 aa12.62□□□□□ -0.39
CAPN1-207ENST00000527189 ZNF324BQ6AW86 544 aaPredicted RBP12.62□□□□□ -0.39
CAPN1-207ENST00000527189 LANCL3Q6ZV70 420 aa12.62□□□□□ -0.39
CAPN1-207ENST00000527189 TTLQ8NG68 377 aa12.62□□□□□ -0.39
CAPN1-207ENST00000527189 RHBDF1Q96CC6 855 aa12.62□□□□□ -0.39
CAPN1-207ENST00000527189 MOCOSQ96EN8 888 aa12.62□□□□□ -0.39
CAPN1-207ENST00000527189 PEX11GQ96HA9 241 aa12.62□□□□□ -0.39
CAPN1-207ENST00000527189 SMIM10Q96HG1 83 aa12.62□□□□□ -0.39
CAPN1-207ENST00000527189 LPAR4Q99677 370 aa12.62□□□□□ -0.39
CAPN1-207ENST00000527189 CPNE1Q99829 537 aa12.62□□□□□ -0.39
CAPN1-207ENST00000527189 EGFL8Q99944 293 aa12.62□□□□□ -0.39
CAPN1-207ENST00000527189 SLC6A16Q9GZN6 736 aa12.62□□□□□ -0.39
CAPN1-207ENST00000527189 PITHD1Q9GZP4 211 aaPredicted RBP12.62□□□□□ -0.39
CAPN1-207ENST00000527189 TXNDC16Q9P2K2 825 aa12.62□□□□□ -0.39
CAPN1-207ENST00000527189 NF1P21359 2839 aa12.62□□□□□ -0.39
CAPN1-207ENST00000527189 SCN3AQ9NY46 2000 aa12.61□□□□□ -0.39
CAPN1-207ENST00000527189 IGHV3-20A0A0C4DH32 117 aa12.61□□□□□ -0.39
CAPN1-207ENST00000527189 FANCGO15287 622 aa12.61□□□□□ -0.39
CAPN1-207ENST00000527189 CHST10O43529 356 aa12.61□□□□□ -0.39
CAPN1-207ENST00000527189 CRYABP02511 175 aaKnown RBP12.61□□□□□ -0.39
CAPN1-207ENST00000527189 SERPIND1P05546 499 aa12.61□□□□□ -0.39
CAPN1-207ENST00000527189 CELA2AP08217 269 aa12.61□□□□□ -0.39
CAPN1-207ENST00000527189 C1GALT1C1LP0DN25 315 aa12.61□□□□□ -0.39
CAPN1-207ENST00000527189 GGT5P36269 586 aa12.61□□□□□ -0.39
CAPN1-207ENST00000527189 PER3P56645 1201 aa12.61□□□□□ -0.39
CAPN1-207ENST00000527189 ZNF33BQ06732 778 aa12.61□□□□□ -0.39
CAPN1-207ENST00000527189 TGFBIQ15582 683 aa12.61□□□□□ -0.39
CAPN1-207ENST00000527189 MEP1AQ16819 746 aa12.61□□□□□ -0.39
CAPN1-207ENST00000527189 DEFB134Q4QY38 66 aa12.61□□□□□ -0.39
CAPN1-207ENST00000527189 ACER2Q5QJU3 275 aa12.61□□□□□ -0.39
CAPN1-207ENST00000527189 C3orf62Q6ZUJ4 267 aa12.61□□□□□ -0.39
CAPN1-207ENST00000527189 FRA10AC1Q70Z53 315 aa12.61□□□□□ -0.39
CAPN1-207ENST00000527189 MAMDC2Q7Z304 686 aaPredicted RBP12.61□□□□□ -0.39
CAPN1-207ENST00000527189 TMPRSS11BQ86T26 416 aa12.61□□□□□ -0.39
CAPN1-207ENST00000527189 CEP97Q8IW35 865 aa12.61□□□□□ -0.39
CAPN1-207ENST00000527189 LGI4Q8N135 537 aa12.61□□□□□ -0.39
CAPN1-207ENST00000527189 TCAIMQ8N3R3 496 aa12.61□□□□□ -0.39
CAPN1-207ENST00000527189 ANKRD53Q8N9V6 530 aa12.61□□□□□ -0.39
CAPN1-207ENST00000527189 UTP15Q8TED0 518 aaKnown RBP12.61□□□□□ -0.39
CAPN1-207ENST00000527189 ANKRD49Q8WVL7 239 aa12.61□□□□□ -0.39
CAPN1-207ENST00000527189 NR4A3Q92570 626 aa12.61□□□□□ -0.39
CAPN1-207ENST00000527189 TSNARE1Q96NA8 513 aa12.61□□□□□ -0.39
CAPN1-207ENST00000527189 NT5DC2Q9H857 520 aa12.61□□□□□ -0.39
CAPN1-207ENST00000527189 KCNK13Q9HB14 408 aa12.61□□□□□ -0.39
CAPN1-207ENST00000527189 GPRC5BQ9NZH0 403 aa12.61□□□□□ -0.39
CAPN1-207ENST00000527189 ABI3Q9P2A4 366 aa12.61□□□□□ -0.39
CAPN1-207ENST00000527189 COPG2Q9UBF2 871 aa12.61□□□□□ -0.39
CAPN1-207ENST00000527189 UTP11Q9Y3A2 253 aaKnown RBP12.61□□□□□ -0.39
CAPN1-207ENST00000527189 ADGRG4Q8IZF6 3080 aa12.61□□□□□ -0.39
CAPN1-207ENST00000527189 SCN2AQ99250 2005 aa12.61□□□□□ -0.39
CAPN1-207ENST00000527189 A0A1B0GUH1 482 aa12.6□□□□□ -0.39
CAPN1-207ENST00000527189 NPEPPSL1A6NEC2 478 aa12.6□□□□□ -0.39
CAPN1-207ENST00000527189 OR2W5A6NFC9 320 aa12.6□□□□□ -0.39
CAPN1-207ENST00000527189 A8MUI8 341 aa12.6□□□□□ -0.39
CAPN1-207ENST00000527189 PRAMEF2O60811 474 aa12.6□□□□□ -0.39
CAPN1-207ENST00000527189 RASAL1O95294 804 aa12.6□□□□□ -0.39
CAPN1-207ENST00000527189 WISP3O95389 354 aaPredicted RBP12.6□□□□□ -0.39
CAPN1-207ENST00000527189 STSP08842 583 aa12.6□□□□□ -0.39
CAPN1-207ENST00000527189 ZNF888P0CJ79 500 aaPredicted RBP12.6□□□□□ -0.39
CAPN1-207ENST00000527189 RNF224P0DH78 156 aa12.6□□□□□ -0.39
CAPN1-207ENST00000527189 SSTR1P30872 391 aa12.6□□□□□ -0.39
CAPN1-207ENST00000527189 HPDP32754 393 aaPredicted RBP12.6□□□□□ -0.39
CAPN1-207ENST00000527189 SLC6A12P48065 614 aa12.6□□□□□ -0.39
CAPN1-207ENST00000527189 ATP6V0D1P61421 351 aa12.6□□□□□ -0.39
CAPN1-207ENST00000527189 STXBP1P61764 594 aaKnown RBP12.6□□□□□ -0.39
CAPN1-207ENST00000527189 HYAL2Q12891 473 aa12.6□□□□□ -0.39
CAPN1-207ENST00000527189 ZNF460Q14592 562 aa12.6□□□□□ -0.39
CAPN1-207ENST00000527189 USP10Q14694 798 aaKnown RBP12.6□□□□□ -0.39
CAPN1-207ENST00000527189 RBBP5Q15291 538 aaKnown RBP12.6□□□□□ -0.39
CAPN1-207ENST00000527189 TSNQ15631 228 aaKnown RBP12.6□□□□□ -0.39
CAPN1-207ENST00000527189 SFT2D3Q587I9 215 aa12.6□□□□□ -0.39
CAPN1-207ENST00000527189 PAPD4Q6PIY7 484 aaKnown RBP12.6□□□□□ -0.39
CAPN1-207ENST00000527189 QSOX2Q6ZRP7 698 aa12.6□□□□□ -0.39
CAPN1-207ENST00000527189 SHISA5Q8N114 240 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms