RNA–Protein interactions for RNA: ENST00000526704.6

LINC01001-201, Transcript of long intergenic non-protein coding RNA 1001, humanhuman

TSL 5 BASIC

Gene LINC01001, Length 2,553 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01001-201ENST00000526704 TIGD6Q17RP2 521 aa11.21□□□□□ -0.61
LINC01001-201ENST00000526704 ZNF404Q494X3 552 aa11.21□□□□□ -0.61
LINC01001-201ENST00000526704 SPIN4Q56A73 249 aa11.21□□□□□ -0.61
LINC01001-201ENST00000526704 GDPD4Q6W3E5 623 aa11.21□□□□□ -0.61
LINC01001-201ENST00000526704 OR7G3Q8NG95 312 aa11.21□□□□□ -0.61
LINC01001-201ENST00000526704 CEP44Q9C0F1 390 aa11.21□□□□□ -0.61
LINC01001-201ENST00000526704 FAM83DQ9H4H8 585 aa11.21□□□□□ -0.61
LINC01001-201ENST00000526704 HMX1Q9NP08 348 aaPredicted RBP11.21□□□□□ -0.61
LINC01001-201ENST00000526704 SACM1LQ9NTJ5 587 aa11.21□□□□□ -0.61
LINC01001-201ENST00000526704 ZNF226Q9NYT6 803 aa11.21□□□□□ -0.61
LINC01001-201ENST00000526704 MGAT4DA6NG13 374 aa11.21□□□□□ -0.62
LINC01001-201ENST00000526704 CLCA1A8K7I4 914 aa11.21□□□□□ -0.62
LINC01001-201ENST00000526704 RNASET2O00584 256 aaKnown RBP11.21□□□□□ -0.62
LINC01001-201ENST00000526704 NPC1O15118 1278 aa11.21□□□□□ -0.62
LINC01001-201ENST00000526704 GRM6O15303 877 aa11.21□□□□□ -0.62
LINC01001-201ENST00000526704 TNFRSF21O75509 655 aa11.21□□□□□ -0.62
LINC01001-201ENST00000526704 UPK1BO75841 260 aa11.21□□□□□ -0.62
LINC01001-201ENST00000526704 SLC16A8O95907 504 aa11.21□□□□□ -0.62
LINC01001-201ENST00000526704 GABRB1P18505 474 aa11.21□□□□□ -0.62
LINC01001-201ENST00000526704 VIPR1P32241 457 aa11.21□□□□□ -0.62
LINC01001-201ENST00000526704 NUDT6P53370 316 aa11.21□□□□□ -0.62
LINC01001-201ENST00000526704 CTSCP53634 463 aa11.21□□□□□ -0.62
LINC01001-201ENST00000526704 DCDC1P59894 354 aa11.21□□□□□ -0.62
LINC01001-201ENST00000526704 RPS13P62277 151 aaKnown RBP11.21□□□□□ -0.62
LINC01001-201ENST00000526704 TUBA1BP68363 451 aa11.21□□□□□ -0.62
LINC01001-201ENST00000526704 SYTL3Q4VX76 610 aa11.21□□□□□ -0.62
LINC01001-201ENST00000526704 COLEC12Q5KU26 742 aa11.21□□□□□ -0.62
LINC01001-201ENST00000526704 Q6ZVL8 140 aa11.21□□□□□ -0.62
LINC01001-201ENST00000526704 TUBA1AQ71U36 451 aa11.21□□□□□ -0.62
LINC01001-201ENST00000526704 SLC46A3Q7Z3Q1 461 aa11.21□□□□□ -0.62
LINC01001-201ENST00000526704 VPS37AQ8NEZ2 397 aa11.21□□□□□ -0.62
LINC01001-201ENST00000526704 OR56A3Q8NH54 315 aa11.21□□□□□ -0.62
LINC01001-201ENST00000526704 PXYLP1Q8TE99 480 aa11.21□□□□□ -0.62
LINC01001-201ENST00000526704 ATL1Q8WXF7 558 aa11.21□□□□□ -0.62
LINC01001-201ENST00000526704 MYDGFQ969H8 173 aa11.21□□□□□ -0.62
LINC01001-201ENST00000526704 ZNF558Q96NG5 402 aa11.21□□□□□ -0.62
LINC01001-201ENST00000526704 NIPSNAP1Q9BPW8 284 aa11.21□□□□□ -0.62
LINC01001-201ENST00000526704 FAM83CQ9BQN1 747 aa11.21□□□□□ -0.62
LINC01001-201ENST00000526704 SH3BP4Q9P0V3 963 aa11.21□□□□□ -0.62
LINC01001-201ENST00000526704 PRRC2BQ5JSZ5 2229 aaKnown RBP11.2□□□□□ -0.62
LINC01001-201ENST00000526704 GNG14A0A1W2PPG7 69 aa11.2□□□□□ -0.62
LINC01001-201ENST00000526704 TEX28O15482 410 aa11.2□□□□□ -0.62
LINC01001-201ENST00000526704 KDM1AO60341 852 aa11.2□□□□□ -0.62
LINC01001-201ENST00000526704 ZNF30P17039 623 aa11.2□□□□□ -0.62
LINC01001-201ENST00000526704 ZNF8P17098 575 aaPredicted RBP11.2□□□□□ -0.62
LINC01001-201ENST00000526704 CRATP43155 626 aa11.2□□□□□ -0.62
LINC01001-201ENST00000526704 OR1E2P47887 323 aa11.2□□□□□ -0.62
LINC01001-201ENST00000526704 CDH12P55289 794 aa11.2□□□□□ -0.62
LINC01001-201ENST00000526704 HBA1P69905 142 aa11.2□□□□□ -0.62
LINC01001-201ENST00000526704 SPIBQ01892 262 aa11.2□□□□□ -0.62
LINC01001-201ENST00000526704 EXOC3L2Q2M3D2 409 aa11.2□□□□□ -0.62
LINC01001-201ENST00000526704 HENMT1Q5T8I9 393 aaKnown RBP11.2□□□□□ -0.62
LINC01001-201ENST00000526704 ANGPTL8Q6UXH0 198 aa11.2□□□□□ -0.62
LINC01001-201ENST00000526704 TMCO2Q7Z6W1 182 aaPredicted RBP11.2□□□□□ -0.62
LINC01001-201ENST00000526704 LYSMD2Q8IV50 215 aa11.2□□□□□ -0.62
LINC01001-201ENST00000526704 RAVER1Q8IY67 606 aaKnown RBP11.2□□□□□ -0.62
LINC01001-201ENST00000526704 LGI4Q8N135 537 aa11.2□□□□□ -0.62
LINC01001-201ENST00000526704 OR4K1Q8NGD4 311 aa11.2□□□□□ -0.62
LINC01001-201ENST00000526704 OR52J3Q8NH60 311 aa11.2□□□□□ -0.62
LINC01001-201ENST00000526704 MYLIPQ8WY64 445 aa11.2□□□□□ -0.62
LINC01001-201ENST00000526704 HPS1Q92902 700 aa11.2□□□□□ -0.62
LINC01001-201ENST00000526704 PKP4Q99569 1192 aa11.2□□□□□ -0.62
LINC01001-201ENST00000526704 HEPHQ9BQS7 1158 aa11.2□□□□□ -0.62
LINC01001-201ENST00000526704 RIOK2Q9BVS4 552 aaKnown RBP11.2□□□□□ -0.62
LINC01001-201ENST00000526704 MMP27Q9H306 513 aa11.2□□□□□ -0.62
LINC01001-201ENST00000526704 GPR83Q9NYM4 423 aa11.2□□□□□ -0.62
LINC01001-201ENST00000526704 SPASTQ9UBP0 616 aa11.2□□□□□ -0.62
LINC01001-201ENST00000526704 ATP6V1HQ9UI12 483 aa11.2□□□□□ -0.62
LINC01001-201ENST00000526704 MAPRE3Q9UPY8 281 aa11.2□□□□□ -0.62
LINC01001-201ENST00000526704 POFUT2Q9Y2G5 429 aa11.2□□□□□ -0.62
LINC01001-201ENST00000526704 TRAV19A0A0A6YYK7 116 aa11.2□□□□□ -0.62
LINC01001-201ENST00000526704 AGAP5A6NIR3 686 aa11.2□□□□□ -0.62
LINC01001-201ENST00000526704 M0R129 80 aa11.2□□□□□ -0.62
LINC01001-201ENST00000526704 DSCR3O14972 297 aa11.2□□□□□ -0.62
LINC01001-201ENST00000526704 ADORA3P0DMS8 318 aa11.2□□□□□ -0.62
LINC01001-201ENST00000526704 CDC20Q12834 499 aa11.2□□□□□ -0.62
LINC01001-201ENST00000526704 IFI44LQ53G44 452 aa11.2□□□□□ -0.62
LINC01001-201ENST00000526704 USP43Q70EL4 1123 aa11.2□□□□□ -0.62
LINC01001-201ENST00000526704 OTOP2Q7RTS6 562 aa11.2□□□□□ -0.62
LINC01001-201ENST00000526704 LACC1Q8IV20 430 aa11.2□□□□□ -0.62
LINC01001-201ENST00000526704 OR2A12Q8NGT7 310 aa11.2□□□□□ -0.62
LINC01001-201ENST00000526704 GOT1L1Q8NHS2 421 aaPredicted RBP11.2□□□□□ -0.62
LINC01001-201ENST00000526704 ZNF675Q8TD23 568 aa11.2□□□□□ -0.62
LINC01001-201ENST00000526704 NEIL2Q969S2 332 aa11.2□□□□□ -0.62
LINC01001-201ENST00000526704 BHLHE41Q9C0J9 482 aaPredicted RBP11.2□□□□□ -0.62
LINC01001-201ENST00000526704 NXF2Q9GZY0 626 aaKnown RBP11.2□□□□□ -0.62
LINC01001-201ENST00000526704 ABCB10Q9NRK6 738 aa11.2□□□□□ -0.62
LINC01001-201ENST00000526704 SH2B3Q9UQQ2 575 aa11.2□□□□□ -0.62
LINC01001-201ENST00000526704 CCL26Q9Y258 94 aa11.2□□□□□ -0.62
LINC01001-201ENST00000526704 A0A1W2PRU2 124 aa11.19□□□□□ -0.62
LINC01001-201ENST00000526704 WASH3PC4AMC7 463 aa11.19□□□□□ -0.62
LINC01001-201ENST00000526704 C6orf47O95873 294 aa11.19□□□□□ -0.62
LINC01001-201ENST00000526704 PTHP01270 115 aa11.19□□□□□ -0.62
LINC01001-201ENST00000526704 CATP04040 527 aaKnown RBP11.19□□□□□ -0.62
LINC01001-201ENST00000526704 STSP08842 583 aa11.19□□□□□ -0.62
LINC01001-201ENST00000526704 CYP2A6P11509 494 aaPredicted RBP11.19□□□□□ -0.62
LINC01001-201ENST00000526704 IDH2P48735 452 aaKnown RBP11.19□□□□□ -0.62
LINC01001-201ENST00000526704 POLR2LP62875 67 aaKnown RBP11.19□□□□□ -0.62
LINC01001-201ENST00000526704 SLC13A2Q13183 592 aa11.19□□□□□ -0.62
LINC01001-201ENST00000526704 SCARB2Q14108 478 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms