RNA–Protein interactions for RNA: ENST00000526280.1

SMPD1-202, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 1,344 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-202ENST00000526280 PTPN4P29074 926 aa12.28□□□□□ -0.44
SMPD1-202ENST00000526280 SERPINB1P30740 379 aa12.28□□□□□ -0.44
SMPD1-202ENST00000526280 ARL1P40616 181 aaPredicted RBP12.28□□□□□ -0.44
SMPD1-202ENST00000526280 ETV4P43268 484 aa12.28□□□□□ -0.44
SMPD1-202ENST00000526280 UCNP55089 124 aa12.28□□□□□ -0.44
SMPD1-202ENST00000526280 NAA20P61599 178 aa12.28□□□□□ -0.44
SMPD1-202ENST00000526280 HERC3Q15034 1050 aa12.28□□□□□ -0.44
SMPD1-202ENST00000526280 NCF4Q15080 339 aa12.28□□□□□ -0.44
SMPD1-202ENST00000526280 RBBP7Q16576 425 aa12.28□□□□□ -0.44
SMPD1-202ENST00000526280 CPSF6Q16630 551 aaKnown RBP eCLIP12.28□□□□□ -0.44
SMPD1-202ENST00000526280 GGTA1PQ4G0N0 100 aa12.28□□□□□ -0.44
SMPD1-202ENST00000526280 LIPMQ5VYY2 423 aa12.28□□□□□ -0.44
SMPD1-202ENST00000526280 COX15Q7KZN9 410 aa12.28□□□□□ -0.44
SMPD1-202ENST00000526280 OVCH1Q7RTY7 1134 aa12.28□□□□□ -0.44
SMPD1-202ENST00000526280 PRSS41Q7RTY9 318 aa12.28□□□□□ -0.44
SMPD1-202ENST00000526280 METTL27Q8N6F8 245 aaPredicted RBP12.28□□□□□ -0.44
SMPD1-202ENST00000526280 CCNYL1Q8N7R7 359 aa12.28□□□□□ -0.44
SMPD1-202ENST00000526280 OR4F6Q8NGB9 312 aa12.28□□□□□ -0.44
SMPD1-202ENST00000526280 ZCCHC10Q8TBK6 192 aa12.28□□□□□ -0.44
SMPD1-202ENST00000526280 UTP15Q8TED0 518 aaKnown RBP12.28□□□□□ -0.44
SMPD1-202ENST00000526280 ZNF473Q8WTR7 871 aaKnown RBP12.28□□□□□ -0.44
SMPD1-202ENST00000526280 TLCD1Q96CP7 247 aa12.28□□□□□ -0.44
SMPD1-202ENST00000526280 SMIM10Q96HG1 83 aa12.28□□□□□ -0.44
SMPD1-202ENST00000526280 SLC45A3Q96JT2 553 aa12.28□□□□□ -0.44
SMPD1-202ENST00000526280 MAGEB10Q96LZ2 347 aaPredicted RBP12.28□□□□□ -0.44
SMPD1-202ENST00000526280 ZNF382Q96SR6 550 aa12.28□□□□□ -0.44
SMPD1-202ENST00000526280 AICDAQ9GZX7 198 aa12.28□□□□□ -0.44
SMPD1-202ENST00000526280 GSTO2Q9H4Y5 243 aa12.28□□□□□ -0.44
SMPD1-202ENST00000526280 KLHL31Q9H511 634 aa12.28□□□□□ -0.44
SMPD1-202ENST00000526280 IFT80Q9P2H3 777 aaPredicted RBP12.28□□□□□ -0.44
SMPD1-202ENST00000526280 ADGRE2Q9UHX3 823 aa12.28□□□□□ -0.44
SMPD1-202ENST00000526280 ZNF225Q9UK10 706 aa12.28□□□□□ -0.44
SMPD1-202ENST00000526280 FARSAQ9Y285 508 aaKnown RBP12.28□□□□□ -0.44
SMPD1-202ENST00000526280 MAU2Q9Y6X3 613 aa12.28□□□□□ -0.44
SMPD1-202ENST00000526280 SCN3AQ9NY46 2000 aa12.27□□□□□ -0.44
SMPD1-202ENST00000526280 PKD1L2Q7Z442 2459 aa12.27□□□□□ -0.44
SMPD1-202ENST00000526280 URADA6NGE7 173 aa12.27□□□□□ -0.45
SMPD1-202ENST00000526280 HMGB1P1B2RPK0 211 aaPredicted RBP12.27□□□□□ -0.45
SMPD1-202ENST00000526280 H0YIG0 161 aa12.27□□□□□ -0.45
SMPD1-202ENST00000526280 TM9SF1O15321 606 aa12.27□□□□□ -0.45
SMPD1-202ENST00000526280 TRIM13O60858 407 aa12.27□□□□□ -0.45
SMPD1-202ENST00000526280 ALBP02768 609 aa12.27□□□□□ -0.45
SMPD1-202ENST00000526280 CD63P08962 238 aa12.27□□□□□ -0.45
SMPD1-202ENST00000526280 ZNF888P0CJ79 500 aaPredicted RBP12.27□□□□□ -0.45
SMPD1-202ENST00000526280 PCNAP12004 261 aa12.27□□□□□ -0.45
SMPD1-202ENST00000526280 ALOX12P18054 663 aa12.27□□□□□ -0.45
SMPD1-202ENST00000526280 ALDH3A1P30838 453 aa12.27□□□□□ -0.45
SMPD1-202ENST00000526280 PIK3CBP42338 1070 aa12.27□□□□□ -0.45
SMPD1-202ENST00000526280 AVPR1BP47901 424 aa12.27□□□□□ -0.45
SMPD1-202ENST00000526280 STXBP1P61764 594 aaKnown RBP12.27□□□□□ -0.45
SMPD1-202ENST00000526280 RPS15P62841 145 aaKnown RBP12.27□□□□□ -0.45
SMPD1-202ENST00000526280 LCP2Q13094 533 aa12.27□□□□□ -0.45
SMPD1-202ENST00000526280 DSG2Q14126 1118 aa12.27□□□□□ -0.45
SMPD1-202ENST00000526280 MPP2Q14168 576 aa12.27□□□□□ -0.45
SMPD1-202ENST00000526280 SLC9A5Q14940 896 aa12.27□□□□□ -0.45
SMPD1-202ENST00000526280 ZRSR2Q15696 482 aaKnown RBP12.27□□□□□ -0.45
SMPD1-202ENST00000526280 ADPRMQ3LIE5 342 aa12.27□□□□□ -0.45
SMPD1-202ENST00000526280 TOR1AIP1Q5JTV8 583 aa12.27□□□□□ -0.45
SMPD1-202ENST00000526280 CFAP157Q5JU67 520 aa12.27□□□□□ -0.45
SMPD1-202ENST00000526280 MLIPQ5VWP3 458 aa12.27□□□□□ -0.45
SMPD1-202ENST00000526280 MRPL14Q6P1L8 145 aaKnown RBP12.27□□□□□ -0.45
SMPD1-202ENST00000526280 LETMD1Q6P1Q0 360 aa12.27□□□□□ -0.45
SMPD1-202ENST00000526280 CCDC81Q6ZN84 652 aa12.27□□□□□ -0.45
SMPD1-202ENST00000526280 ABHD13Q7L211 337 aa12.27□□□□□ -0.45
SMPD1-202ENST00000526280 PDSS2Q86YH6 399 aa12.27□□□□□ -0.45
SMPD1-202ENST00000526280 ENDOVQ8N8Q3 282 aaKnown RBP12.27□□□□□ -0.45
SMPD1-202ENST00000526280 AMER3Q8N944 861 aa12.27□□□□□ -0.45
SMPD1-202ENST00000526280 OR9A4Q8NGU2 314 aa12.27□□□□□ -0.45
SMPD1-202ENST00000526280 HUS1BQ8NHY5 278 aa12.27□□□□□ -0.45
SMPD1-202ENST00000526280 WDR20Q8TBZ3 569 aa12.27□□□□□ -0.45
SMPD1-202ENST00000526280 CCT6BQ92526 530 aa12.27□□□□□ -0.45
SMPD1-202ENST00000526280 COL26A1Q96A83 441 aa12.27□□□□□ -0.45
SMPD1-202ENST00000526280 FKBP10Q96AY3 582 aa12.27□□□□□ -0.45
SMPD1-202ENST00000526280 REPS1Q96D71 796 aa12.27□□□□□ -0.45
SMPD1-202ENST00000526280 MS4A6EQ96DS6 147 aa12.27□□□□□ -0.45
SMPD1-202ENST00000526280 MMABQ96EY8 250 aaPredicted RBP12.27□□□□□ -0.45
SMPD1-202ENST00000526280 ATP6V1G3Q96LB4 118 aa12.27□□□□□ -0.45
SMPD1-202ENST00000526280 SLC26A1Q9H2B4 701 aa12.27□□□□□ -0.45
SMPD1-202ENST00000526280 ANKHQ9HCJ1 492 aa12.27□□□□□ -0.45
SMPD1-202ENST00000526280 KCNK9Q9NPC2 374 aa12.27□□□□□ -0.45
SMPD1-202ENST00000526280 GPN3Q9UHW5 284 aaPredicted RBP12.27□□□□□ -0.45
SMPD1-202ENST00000526280 STK38LQ9Y2H1 464 aa12.27□□□□□ -0.45
SMPD1-202ENST00000526280 MRPS18BQ9Y676 258 aaKnown RBP12.27□□□□□ -0.45
SMPD1-202ENST00000526280 CCDC88CQ9P219 2028 aa12.26□□□□□ -0.45
SMPD1-202ENST00000526280 ERICH4A6NGS2 130 aa12.26□□□□□ -0.45
SMPD1-202ENST00000526280 K7ENP7 123 aa12.26□□□□□ -0.45
SMPD1-202ENST00000526280 SGK494L7N484 410 aa12.26□□□□□ -0.45
SMPD1-202ENST00000526280 UBFD1O14562 309 aaKnown RBP12.26□□□□□ -0.45
SMPD1-202ENST00000526280 GALR3O60755 368 aaPredicted RBP12.26□□□□□ -0.45
SMPD1-202ENST00000526280 CNOT3O75175 753 aaKnown RBP12.26□□□□□ -0.45
SMPD1-202ENST00000526280 KLF7O75840 302 aaPredicted RBP12.26□□□□□ -0.45
SMPD1-202ENST00000526280 KLHL18O94889 574 aa12.26□□□□□ -0.45
SMPD1-202ENST00000526280 OR4F21O95013 312 aa12.26□□□□□ -0.45
SMPD1-202ENST00000526280 ZWINTO95229 277 aa12.26□□□□□ -0.45
SMPD1-202ENST00000526280 RECKO95980 971 aa12.26□□□□□ -0.45
SMPD1-202ENST00000526280 BPGMP07738 259 aa12.26□□□□□ -0.45
SMPD1-202ENST00000526280 ATXN8OSP0DMR3 200 aa12.26□□□□□ -0.45
SMPD1-202ENST00000526280 IL1RNP18510 177 aa12.26□□□□□ -0.45
SMPD1-202ENST00000526280 FBLP22087 321 aaKnown RBP12.26□□□□□ -0.45
SMPD1-202ENST00000526280 HNRNPH1P31943 449 aaKnown RBP12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms