RNA–Protein interactions for RNA: ENST00000526066.5

CCS-204, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 2

Gene CCS, Length 872 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-204ENST00000526066 MILR1Q7Z6M3 343 aa16.47■□□□□ 0.23
CCS-204ENST00000526066 PPP1R3BQ86XI6 285 aa16.47■□□□□ 0.23
CCS-204ENST00000526066 GALNT11Q8NCW6 608 aa16.47■□□□□ 0.23
CCS-204ENST00000526066 OR4F6Q8NGB9 312 aa16.47■□□□□ 0.23
CCS-204ENST00000526066 TCTN2Q96GX1 697 aa16.47■□□□□ 0.23
CCS-204ENST00000526066 SLC41A2Q96JW4 573 aa16.47■□□□□ 0.23
CCS-204ENST00000526066 AIF1LQ9BQI0 150 aa16.47■□□□□ 0.23
CCS-204ENST00000526066 NT5DC2Q9H857 520 aa16.47■□□□□ 0.23
CCS-204ENST00000526066 PDE7BQ9NP56 450 aa16.47■□□□□ 0.23
CCS-204ENST00000526066 THAP1Q9NVV9 213 aa16.47■□□□□ 0.23
CCS-204ENST00000526066 TRPS1Q9UHF7 1281 aa16.47■□□□□ 0.23
CCS-204ENST00000526066 HAO1Q9UJM8 370 aa16.47■□□□□ 0.23
CCS-204ENST00000526066 ZNF225Q9UK10 706 aa16.47■□□□□ 0.23
CCS-204ENST00000526066 BTRCQ9Y297 605 aa16.47■□□□□ 0.23
CCS-204ENST00000526066 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.47■□□□□ 0.23
CCS-204ENST00000526066 PCM1Q15154 2024 aa16.46■□□□□ 0.23
CCS-204ENST00000526066 NOTCH2Q04721 2471 aa16.46■□□□□ 0.23
CCS-204ENST00000526066 MYO9AB2RTY4 2548 aa16.46■□□□□ 0.23
CCS-204ENST00000526066 KCNE1BA0A087WTH5 132 aa16.46■□□□□ 0.23
CCS-204ENST00000526066 TRBC2A0A5B9 178 aa16.46■□□□□ 0.23
CCS-204ENST00000526066 C21orf140B9A014 251 aa16.46■□□□□ 0.23
CCS-204ENST00000526066 HSPA4LO95757 839 aa16.46■□□□□ 0.23
CCS-204ENST00000526066 RECKO95980 971 aa16.46■□□□□ 0.23
CCS-204ENST00000526066 ENO1P06733 434 aaKnown RBP16.46■□□□□ 0.23
CCS-204ENST00000526066 CHRNGP07510 517 aa16.46■□□□□ 0.23
CCS-204ENST00000526066 FGF4P08620 206 aa16.46■□□□□ 0.23
CCS-204ENST00000526066 EZRP15311 586 aaKnown RBP16.46■□□□□ 0.23
CCS-204ENST00000526066 VARSP26640 1264 aaKnown RBP16.46■□□□□ 0.23
CCS-204ENST00000526066 ARRB2P32121 409 aa16.46■□□□□ 0.23
CCS-204ENST00000526066 GRK3P35626 688 aa16.46■□□□□ 0.23
CCS-204ENST00000526066 PGDP52209 483 aa16.46■□□□□ 0.23
CCS-204ENST00000526066 SH3BP2P78314 561 aa16.46■□□□□ 0.23
CCS-204ENST00000526066 SLBPQ14493 270 aaKnown RBP eCLIP16.46■□□□□ 0.23
CCS-204ENST00000526066 ZIC1Q15915 447 aa16.46■□□□□ 0.23
CCS-204ENST00000526066 LETMD1Q6P1Q0 360 aa16.46■□□□□ 0.23
CCS-204ENST00000526066 ADCK2Q7Z695 626 aa16.46■□□□□ 0.23
CCS-204ENST00000526066 SYVN1Q86TM6 617 aa16.46■□□□□ 0.23
CCS-204ENST00000526066 KIRREL3Q8IZU9 778 aa16.46■□□□□ 0.23
CCS-204ENST00000526066 KRT78Q8N1N4 520 aa16.46■□□□□ 0.23
CCS-204ENST00000526066 TBC1D19Q8N5T2 526 aa16.46■□□□□ 0.23
CCS-204ENST00000526066 CPT1CQ8TCG5 803 aa16.46■□□□□ 0.23
CCS-204ENST00000526066 UBE2E3Q969T4 207 aa16.46■□□□□ 0.23
CCS-204ENST00000526066 RNF31Q96EP0 1072 aa16.46■□□□□ 0.23
CCS-204ENST00000526066 CCDC134Q9H6E4 229 aa16.46■□□□□ 0.23
CCS-204ENST00000526066 MID1IP1Q9NPA3 183 aa16.46■□□□□ 0.23
CCS-204ENST00000526066 G3BP2Q9UN86 482 aaKnown RBP16.46■□□□□ 0.23
CCS-204ENST00000526066 KLHL20Q9Y2M5 609 aa16.46■□□□□ 0.23
CCS-204ENST00000526066 TSC22D4Q9Y3Q8 395 aa16.46■□□□□ 0.23
CCS-204ENST00000526066 A0A1B0GTL3 188 aa16.45■□□□□ 0.22
CCS-204ENST00000526066 H0YIV9 168 aa16.45■□□□□ 0.22
CCS-204ENST00000526066 MAP3K7O43318 606 aa16.45■□□□□ 0.22
CCS-204ENST00000526066 ITM2AO43736 263 aa16.45■□□□□ 0.22
CCS-204ENST00000526066 MSL3P1P0C860 447 aa16.45■□□□□ 0.22
CCS-204ENST00000526066 NELFEP18615 380 aaKnown RBP16.45■□□□□ 0.22
CCS-204ENST00000526066 CD22P20273 847 aa16.45■□□□□ 0.22
CCS-204ENST00000526066 GNLYP22749 145 aa16.45■□□□□ 0.22
CCS-204ENST00000526066 ARL1P40616 181 aaPredicted RBP16.45■□□□□ 0.22
CCS-204ENST00000526066 HSD11B2P80365 405 aa16.45■□□□□ 0.22
CCS-204ENST00000526066 OCRLQ01968 901 aa16.45■□□□□ 0.22
CCS-204ENST00000526066 GUCY1A3Q02108 690 aa16.45■□□□□ 0.22
CCS-204ENST00000526066 HIST2H2ACQ16777 129 aaPredicted RBP16.45■□□□□ 0.22
CCS-204ENST00000526066 LARP7Q4G0J3 582 aaKnown RBP eCLIP16.45■□□□□ 0.22
CCS-204ENST00000526066 C10orf62Q5T681 223 aaPredicted RBP16.45■□□□□ 0.22
CCS-204ENST00000526066 HIST2H2AA3Q6FI13 130 aa16.45■□□□□ 0.22
CCS-204ENST00000526066 TMIGD1Q6UXZ0 262 aa16.45■□□□□ 0.22
CCS-204ENST00000526066 RNF44Q7L0R7 432 aa16.45■□□□□ 0.22
CCS-204ENST00000526066 CUZD1Q86UP6 607 aa16.45■□□□□ 0.22
CCS-204ENST00000526066 APLFQ8IW19 511 aaPredicted RBP16.45■□□□□ 0.22
CCS-204ENST00000526066 D2HGDHQ8N465 521 aa16.45■□□□□ 0.22
CCS-204ENST00000526066 SSC4DQ8WTU2 575 aa16.45■□□□□ 0.22
CCS-204ENST00000526066 THAP11Q96EK4 314 aa16.45■□□□□ 0.22
CCS-204ENST00000526066 SEC16BQ96JE7 1060 aa16.45■□□□□ 0.22
CCS-204ENST00000526066 CDK15Q96Q40 435 aa16.45■□□□□ 0.22
CCS-204ENST00000526066 SORT1Q99523 831 aa16.45■□□□□ 0.22
CCS-204ENST00000526066 SLC29A3Q9BZD2 475 aa16.45■□□□□ 0.22
CCS-204ENST00000526066 SPNS1Q9H2V7 528 aa16.45■□□□□ 0.22
CCS-204ENST00000526066 RNF11Q9Y3C5 154 aa16.45■□□□□ 0.22
CCS-204ENST00000526066 RAP2CQ9Y3L5 183 aa16.45■□□□□ 0.22
CCS-204ENST00000526066 PCDHGA6Q9Y5G7 932 aa16.45■□□□□ 0.22
CCS-204ENST00000526066 ICE1Q9Y2F5 2266 aa16.45■□□□□ 0.22
CCS-204ENST00000526066 K7EM74 188 aa16.44■□□□□ 0.22
CCS-204ENST00000526066 HAT1O14929 419 aa16.44■□□□□ 0.22
CCS-204ENST00000526066 OR4F21O95013 312 aa16.44■□□□□ 0.22
CCS-204ENST00000526066 FGF5P12034 268 aa16.44■□□□□ 0.22
CCS-204ENST00000526066 GSTM2P28161 218 aa16.44■□□□□ 0.22
CCS-204ENST00000526066 SCTRP47872 440 aa16.44■□□□□ 0.22
CCS-204ENST00000526066 UQCRFS1P47985 274 aa16.44■□□□□ 0.22
CCS-204ENST00000526066 ARL4DP49703 201 aa16.44■□□□□ 0.22
CCS-204ENST00000526066 RPS15AP62244 130 aaKnown RBP16.44■□□□□ 0.22
CCS-204ENST00000526066 RPS15P62841 145 aaKnown RBP16.44■□□□□ 0.22
CCS-204ENST00000526066 ZC3H12BQ5HYM0 836 aaKnown RBP16.44■□□□□ 0.22
CCS-204ENST00000526066 MED27Q6P2C8 311 aa16.44■□□□□ 0.22
CCS-204ENST00000526066 LAS2Q8IYD9 372 aa16.44■□□□□ 0.22
CCS-204ENST00000526066 DNAJC22Q8N4W6 341 aa16.44■□□□□ 0.22
CCS-204ENST00000526066 CT55Q8WUE5 264 aa16.44■□□□□ 0.22
CCS-204ENST00000526066 THAP4Q8WY91 577 aa16.44■□□□□ 0.22
CCS-204ENST00000526066 C7orf26Q96N11 449 aa16.44■□□□□ 0.22
CCS-204ENST00000526066 ZFYVE21Q9BQ24 234 aa16.44■□□□□ 0.22
CCS-204ENST00000526066 SLC25A23Q9BV35 468 aa16.44■□□□□ 0.22
CCS-204ENST00000526066 C20orf27Q9GZN8 174 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms