RNA–Protein interactions for RNA: ENST00000526058.1

CCS-203, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 4

Gene CCS, Length 593 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-203ENST00000526058 USP9XQ93008 2570 aaPredicted RBP16.05■□□□□ 0.16
CCS-203ENST00000526058 LOC102723996A0A087X1L8 192 aa16.05■□□□□ 0.16
CCS-203ENST00000526058 IGHV3-20A0A0C4DH32 117 aa16.05■□□□□ 0.16
CCS-203ENST00000526058 C4orf51C9J302 202 aa16.05■□□□□ 0.16
CCS-203ENST00000526058 H2AFYO75367 372 aaKnown RBP16.05■□□□□ 0.16
CCS-203ENST00000526058 STK16O75716 305 aa16.05■□□□□ 0.16
CCS-203ENST00000526058 CDC123O75794 336 aaPredicted RBP16.05■□□□□ 0.16
CCS-203ENST00000526058 LTA4HP09960 611 aaKnown RBP16.05■□□□□ 0.16
CCS-203ENST00000526058 PRR35P0CG20 571 aa16.05■□□□□ 0.16
CCS-203ENST00000526058 RAB8AP61006 207 aa16.05■□□□□ 0.16
CCS-203ENST00000526058 INPP5JQ15735 1006 aaPredicted RBP16.05■□□□□ 0.16
CCS-203ENST00000526058 CEP128Q6ZU80 1094 aa16.05■□□□□ 0.16
CCS-203ENST00000526058 ABHD13Q7L211 337 aa16.05■□□□□ 0.16
CCS-203ENST00000526058 KBTBD2Q8IY47 623 aa16.05■□□□□ 0.16
CCS-203ENST00000526058 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.05■□□□□ 0.16
CCS-203ENST00000526058 CENPLQ8N0S6 344 aaPredicted RBP16.05■□□□□ 0.16
CCS-203ENST00000526058 ZADH2Q8N4Q0 377 aa16.05■□□□□ 0.16
CCS-203ENST00000526058 SNX31Q8N9S9 440 aa16.05■□□□□ 0.16
CCS-203ENST00000526058 TRPV3Q8NET8 790 aa16.05■□□□□ 0.16
CCS-203ENST00000526058 STAG3L4Q8TBR4 150 aa16.05■□□□□ 0.16
CCS-203ENST00000526058 KCTD4Q8WVF5 259 aa16.05■□□□□ 0.16
CCS-203ENST00000526058 METTL21AQ8WXB1 218 aa16.05■□□□□ 0.16
CCS-203ENST00000526058 PSMF1Q92530 271 aa16.05■□□□□ 0.16
CCS-203ENST00000526058 ATOH8Q96SQ7 321 aa16.05■□□□□ 0.16
CCS-203ENST00000526058 FUT8Q9BYC5 575 aa16.05■□□□□ 0.16
CCS-203ENST00000526058 ZNF700Q9H0M5 742 aa16.05■□□□□ 0.16
CCS-203ENST00000526058 CNOT10Q9H9A5 744 aaKnown RBP16.05■□□□□ 0.16
CCS-203ENST00000526058 SNX15Q9NRS6 342 aa16.05■□□□□ 0.16
CCS-203ENST00000526058 GPRC5BQ9NZH0 403 aa16.05■□□□□ 0.16
CCS-203ENST00000526058 B3GNT3Q9Y2A9 372 aa16.05■□□□□ 0.16
CCS-203ENST00000526058 ACOT9Q9Y305 439 aa16.05■□□□□ 0.16
CCS-203ENST00000526058 PTPN13Q12923 2485 aa16.04■□□□□ 0.16
CCS-203ENST00000526058 UBXN8O00124 270 aa16.04■□□□□ 0.16
CCS-203ENST00000526058 PCDH17O14917 1159 aa16.04■□□□□ 0.16
CCS-203ENST00000526058 CHST10O43529 356 aa16.04■□□□□ 0.16
CCS-203ENST00000526058 CCNT2O60583 730 aaKnown RBP16.04■□□□□ 0.16
CCS-203ENST00000526058 S100BP04271 92 aaPredicted RBP16.04■□□□□ 0.16
CCS-203ENST00000526058 C2P06681 752 aa16.04■□□□□ 0.16
CCS-203ENST00000526058 SERPINA6P08185 405 aa16.04■□□□□ 0.16
CCS-203ENST00000526058 SMIM10L1P0DMW3 83 aa16.04■□□□□ 0.16
CCS-203ENST00000526058 EPORP19235 508 aa16.04■□□□□ 0.16
CCS-203ENST00000526058 AGTR2P50052 363 aa16.04■□□□□ 0.16
CCS-203ENST00000526058 TOR1AIP1Q5JTV8 583 aa16.04■□□□□ 0.16
CCS-203ENST00000526058 IGFL2Q6UWQ7 119 aa16.04■□□□□ 0.16
CCS-203ENST00000526058 TMIGD1Q6UXZ0 262 aa16.04■□□□□ 0.16
CCS-203ENST00000526058 LINC00696Q6ZRV3 163 aa16.04■□□□□ 0.16
CCS-203ENST00000526058 BRIX1Q8TDN6 353 aaKnown RBP16.04■□□□□ 0.16
CCS-203ENST00000526058 TM9SF4Q92544 642 aa16.04■□□□□ 0.16
CCS-203ENST00000526058 TRIM44Q96DX7 344 aaPredicted RBP16.04■□□□□ 0.16
CCS-203ENST00000526058 SMIM10Q96HG1 83 aa16.04■□□□□ 0.16
CCS-203ENST00000526058 CAPS2Q9BXY5 557 aa16.04■□□□□ 0.16
CCS-203ENST00000526058 CD244Q9BZW8 370 aa16.04■□□□□ 0.16
CCS-203ENST00000526058 LANCL2Q9NS86 450 aa16.04■□□□□ 0.16
CCS-203ENST00000526058 RIC8BQ9NVN3 520 aa16.04■□□□□ 0.16
CCS-203ENST00000526058 NUDT4Q9NZJ9 180 aa16.04■□□□□ 0.16
CCS-203ENST00000526058 SUPT3HB4E1H0 165 aa16.03■□□□□ 0.16
CCS-203ENST00000526058 CLGNO14967 610 aa16.03■□□□□ 0.16
CCS-203ENST00000526058 KERAO60938 352 aa16.03■□□□□ 0.16
CCS-203ENST00000526058 SUPT3HO75486 399 aa16.03■□□□□ 0.16
CCS-203ENST00000526058 ALDOAP04075 364 aaKnown RBP16.03■□□□□ 0.16
CCS-203ENST00000526058 SERPINA7P05543 415 aa16.03■□□□□ 0.16
CCS-203ENST00000526058 GLRBP48167 497 aa16.03■□□□□ 0.16
CCS-203ENST00000526058 RHAGQ02094 409 aa16.03■□□□□ 0.16
CCS-203ENST00000526058 DOC2AQ14183 400 aa16.03■□□□□ 0.16
CCS-203ENST00000526058 PDK4Q16654 411 aa16.03■□□□□ 0.16
CCS-203ENST00000526058 XKR6Q5GH73 641 aa16.03■□□□□ 0.16
CCS-203ENST00000526058 ADNP2Q6IQ32 1131 aa16.03■□□□□ 0.16
CCS-203ENST00000526058 ISLR2Q6UXK2 745 aa16.03■□□□□ 0.16
CCS-203ENST00000526058 Q6ZS92 163 aa16.03■□□□□ 0.16
CCS-203ENST00000526058 CPEB2Q7Z5Q1 589 aaKnown RBP16.03■□□□□ 0.16
CCS-203ENST00000526058 ANKRD37Q7Z713 158 aa16.03■□□□□ 0.16
CCS-203ENST00000526058 CUZD1Q86UP6 607 aa16.03■□□□□ 0.16
CCS-203ENST00000526058 SIRT6Q8N6T7 355 aa16.03■□□□□ 0.16
CCS-203ENST00000526058 EFCAB3Q8N7B9 438 aa16.03■□□□□ 0.16
CCS-203ENST00000526058 CEP112Q8N8E3 955 aa16.03■□□□□ 0.16
CCS-203ENST00000526058 UHMK1Q8TAS1 419 aaKnown RBP16.03■□□□□ 0.16
CCS-203ENST00000526058 C19orf60Q96EN9 201 aa16.03■□□□□ 0.16
CCS-203ENST00000526058 IMMP1LQ96LU5 166 aa16.03■□□□□ 0.16
CCS-203ENST00000526058 OR1F2PQ96R84 312 aa16.03■□□□□ 0.16
CCS-203ENST00000526058 TSPYL1Q9H0U9 437 aa16.03■□□□□ 0.16
CCS-203ENST00000526058 PTGFRNQ9P2B2 879 aa16.03■□□□□ 0.16
CCS-203ENST00000526058 COPG2Q9UBF2 871 aa16.03■□□□□ 0.16
CCS-203ENST00000526058 ZNF490Q9ULM2 529 aaPredicted RBP16.03■□□□□ 0.16
CCS-203ENST00000526058 UTP20O75691 2785 aaKnown RBP16.03■□□□□ 0.16
CCS-203ENST00000526058 CPAMD8Q8IZJ3 1885 aa16.02■□□□□ 0.16
CCS-203ENST00000526058 A0A087X1B8 175 aa16.02■□□□□ 0.16
CCS-203ENST00000526058 A0A096LPK6 155 aa16.02■□□□□ 0.16
CCS-203ENST00000526058 URADA6NGE7 173 aa16.02■□□□□ 0.16
CCS-203ENST00000526058 SEC24DO94855 1032 aaPredicted RBP16.02■□□□□ 0.16
CCS-203ENST00000526058 TBX6O95947 436 aaPredicted RBP16.02■□□□□ 0.16
CCS-203ENST00000526058 FHP07954 510 aa16.02■□□□□ 0.16
CCS-203ENST00000526058 CYC1P08574 325 aa16.02■□□□□ 0.16
CCS-203ENST00000526058 ITGAMP11215 1152 aa16.02■□□□□ 0.16
CCS-203ENST00000526058 MTHFD2P13995 350 aa16.02■□□□□ 0.16
CCS-203ENST00000526058 CD22P20273 847 aa16.02■□□□□ 0.16
CCS-203ENST00000526058 TYK2P29597 1187 aa16.02■□□□□ 0.16
CCS-203ENST00000526058 HNRNPH1P31943 449 aaKnown RBP16.02■□□□□ 0.16
CCS-203ENST00000526058 VN1R5Q7Z5H4 357 aa16.02■□□□□ 0.16
CCS-203ENST00000526058 KRT78Q8N1N4 520 aa16.02■□□□□ 0.16
CCS-203ENST00000526058 PLPP5Q8NEB5 264 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms