RNA–Protein interactions for RNA: ENST00000523549.1

NSMCE2-211, Transcript of NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase, humanhuman

TSL 3

Gene NSMCE2, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE2-211ENST00000523549 SLC46A3Q7Z3Q1 461 aa3.45□□□□□ -1.86
NSMCE2-211ENST00000523549 TRMT11Q7Z4G4 463 aaKnown RBP3.45□□□□□ -1.86
NSMCE2-211ENST00000523549 CPOQ8IVL8 374 aa3.45□□□□□ -1.86
NSMCE2-211ENST00000523549 CEP97Q8IW35 865 aa3.45□□□□□ -1.86
NSMCE2-211ENST00000523549 SLC25A45Q8N413 288 aa3.45□□□□□ -1.86
NSMCE2-211ENST00000523549 PCDH20Q8N6Y1 951 aaKnown RBP3.45□□□□□ -1.86
NSMCE2-211ENST00000523549 SNRNP40Q96DI7 357 aaKnown RBP3.45□□□□□ -1.86
NSMCE2-211ENST00000523549 SCRN2Q96FV2 425 aa3.45□□□□□ -1.86
NSMCE2-211ENST00000523549 ST6GAL2Q96JF0 529 aa3.45□□□□□ -1.86
NSMCE2-211ENST00000523549 QRFPRQ96P65 431 aa3.45□□□□□ -1.86
NSMCE2-211ENST00000523549 GCNAQ96QF7 691 aa3.45□□□□□ -1.86
NSMCE2-211ENST00000523549 ASCL2Q99929 193 aa3.45□□□□□ -1.86
NSMCE2-211ENST00000523549 NEURL2Q9BR09 285 aa3.45□□□□□ -1.86
NSMCE2-211ENST00000523549 H2AFJQ9BTM1 129 aa3.45□□□□□ -1.86
NSMCE2-211ENST00000523549 JMJD4Q9H9V9 463 aa3.45□□□□□ -1.86
NSMCE2-211ENST00000523549 GDF3Q9NR23 364 aa3.45□□□□□ -1.86
NSMCE2-211ENST00000523549 SPHK2Q9NRA0 654 aa3.45□□□□□ -1.86
NSMCE2-211ENST00000523549 SLC25A10Q9UBX3 287 aaPredicted RBP3.45□□□□□ -1.86
NSMCE2-211ENST00000523549 SCINQ9Y6U3 715 aa3.45□□□□□ -1.86
NSMCE2-211ENST00000523549 DYNC2H1Q8NCM8 4307 aaKnown RBP3.45□□□□□ -1.86
NSMCE2-211ENST00000523549 PTPRCP08575 1304 aa3.44□□□□□ -1.86
NSMCE2-211ENST00000523549 COL7A1Q02388 2944 aa3.44□□□□□ -1.86
NSMCE2-211ENST00000523549 IGKV6D-21A0A0A0MT36 114 aa3.44□□□□□ -1.86
NSMCE2-211ENST00000523549 LOC100653049A0A140TA62 436 aa3.44□□□□□ -1.86
NSMCE2-211ENST00000523549 NR5A2O00482 541 aa3.44□□□□□ -1.86
NSMCE2-211ENST00000523549 MAGEB2O15479 319 aa3.44□□□□□ -1.86
NSMCE2-211ENST00000523549 ZNHIT1O43257 154 aa3.44□□□□□ -1.86
NSMCE2-211ENST00000523549 SEC14L5O43304 696 aa3.44□□□□□ -1.86
NSMCE2-211ENST00000523549 RANBP6O60518 1105 aaKnown RBP3.44□□□□□ -1.86
NSMCE2-211ENST00000523549 KRT34O76011 436 aa3.44□□□□□ -1.86
NSMCE2-211ENST00000523549 CCNE2O96020 404 aa3.44□□□□□ -1.86
NSMCE2-211ENST00000523549 OR4Q2P0C623 313 aa3.44□□□□□ -1.86
NSMCE2-211ENST00000523549 XBP1P17861 261 aa3.44□□□□□ -1.86
NSMCE2-211ENST00000523549 ZNF10P21506 573 aaPredicted RBP3.44□□□□□ -1.86
NSMCE2-211ENST00000523549 CDC25CP30307 473 aa3.44□□□□□ -1.86
NSMCE2-211ENST00000523549 OXTRP30559 389 aa3.44□□□□□ -1.86
NSMCE2-211ENST00000523549 HNRNPH3P31942 346 aaKnown RBP3.44□□□□□ -1.86
NSMCE2-211ENST00000523549 FASLGP48023 281 aa3.44□□□□□ -1.86
NSMCE2-211ENST00000523549 RXRGP48443 463 aa3.44□□□□□ -1.86
NSMCE2-211ENST00000523549 DSCR10P59022 87 aa3.44□□□□□ -1.86
NSMCE2-211ENST00000523549 CDKN3Q16667 212 aa3.44□□□□□ -1.86
NSMCE2-211ENST00000523549 ZC2HC1CQ53FD0 456 aaPredicted RBP3.44□□□□□ -1.86
NSMCE2-211ENST00000523549 DCAF10Q5QP82 559 aa3.44□□□□□ -1.86
NSMCE2-211ENST00000523549 FRG2Q64ET8 278 aa3.44□□□□□ -1.86
NSMCE2-211ENST00000523549 ZNF280DQ6N043 979 aa3.44□□□□□ -1.86
NSMCE2-211ENST00000523549 GUSBP11Q6P575 273 aa3.44□□□□□ -1.86
NSMCE2-211ENST00000523549 FAM171BQ6P995 826 aa3.44□□□□□ -1.86
NSMCE2-211ENST00000523549 EFL1Q7Z2Z2 1120 aaKnown RBP3.44□□□□□ -1.86
NSMCE2-211ENST00000523549 TMEM150AQ86TG1 271 aa3.44□□□□□ -1.86
NSMCE2-211ENST00000523549 SPAG16Q8N0X2 631 aa3.44□□□□□ -1.86
NSMCE2-211ENST00000523549 MYRIPQ8NFW9 859 aa3.44□□□□□ -1.86
NSMCE2-211ENST00000523549 OR4C6Q8NH72 309 aa3.44□□□□□ -1.86
NSMCE2-211ENST00000523549 PSMG2Q969U7 264 aa3.44□□□□□ -1.86
NSMCE2-211ENST00000523549 CPB2Q96IY4 423 aa3.44□□□□□ -1.86
NSMCE2-211ENST00000523549 SLC22A12Q96S37 553 aa3.44□□□□□ -1.86
NSMCE2-211ENST00000523549 GABRG3Q99928 467 aa3.44□□□□□ -1.86
NSMCE2-211ENST00000523549 TMEM121Q9BTD3 319 aa3.44□□□□□ -1.86
NSMCE2-211ENST00000523549 NUP58Q9BVL2 599 aa3.44□□□□□ -1.86
NSMCE2-211ENST00000523549 LIME1Q9H400 295 aa3.44□□□□□ -1.86
NSMCE2-211ENST00000523549 MINDY3Q9H8M7 445 aa3.44□□□□□ -1.86
NSMCE2-211ENST00000523549 LY9Q9HBG7 655 aa3.44□□□□□ -1.86
NSMCE2-211ENST00000523549 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP3.44□□□□□ -1.86
NSMCE2-211ENST00000523549 ZNF302Q9NR11 478 aa3.44□□□□□ -1.86
NSMCE2-211ENST00000523549 MAP3K20Q9NYL2 800 aaKnown RBP3.44□□□□□ -1.86
NSMCE2-211ENST00000523549 A4GNTQ9UNA3 340 aa3.44□□□□□ -1.86
NSMCE2-211ENST00000523549 USF3Q68DE3 2245 aa3.44□□□□□ -1.86
NSMCE2-211ENST00000523549 HCFC1P51610 2035 aa3.43□□□□□ -1.86
NSMCE2-211ENST00000523549 IGLV5-45A0A087WSX0 123 aa3.43□□□□□ -1.86
NSMCE2-211ENST00000523549 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP3.43□□□□□ -1.86
NSMCE2-211ENST00000523549 TEX13CA0A0J9YWL9 993 aa3.43□□□□□ -1.86
NSMCE2-211ENST00000523549 A0A1W2PR77 199 aa3.43□□□□□ -1.86
NSMCE2-211ENST00000523549 ZSCAN5CA6NGD5 496 aaPredicted RBP3.43□□□□□ -1.86
NSMCE2-211ENST00000523549 PTGESO14684 152 aa3.43□□□□□ -1.86
NSMCE2-211ENST00000523549 SYNGR3O43761 229 aa3.43□□□□□ -1.86
NSMCE2-211ENST00000523549 B3GAT3O94766 335 aa3.43□□□□□ -1.86
NSMCE2-211ENST00000523549 FGF19O95750 216 aa3.43□□□□□ -1.86
NSMCE2-211ENST00000523549 SEMA4FO95754 770 aa3.43□□□□□ -1.86
NSMCE2-211ENST00000523549 IGLV3-19P01714 112 aa3.43□□□□□ -1.86
NSMCE2-211ENST00000523549 IGHV4-34P06331 123 aa3.43□□□□□ -1.86
NSMCE2-211ENST00000523549 KRT19P08727 400 aa3.43□□□□□ -1.86
NSMCE2-211ENST00000523549 HOXB5P09067 269 aa3.43□□□□□ -1.86
NSMCE2-211ENST00000523549 FAM106CPP0CH98 169 aa3.43□□□□□ -1.86
NSMCE2-211ENST00000523549 GIMD1P0DJR0 217 aa3.43□□□□□ -1.86
NSMCE2-211ENST00000523549 UFM1P61960 85 aa3.43□□□□□ -1.86
NSMCE2-211ENST00000523549 CSNK2A1P68400 391 aaPredicted RBP3.43□□□□□ -1.86
NSMCE2-211ENST00000523549 RPL24P83731 157 aaKnown RBP3.43□□□□□ -1.86
NSMCE2-211ENST00000523549 FOLH1Q04609 750 aa3.43□□□□□ -1.86
NSMCE2-211ENST00000523549 FOXM1Q08050 763 aa3.43□□□□□ -1.86
NSMCE2-211ENST00000523549 ITGB3BPQ13352 177 aaPredicted RBP3.43□□□□□ -1.86
NSMCE2-211ENST00000523549 ZNF177Q13360 481 aaPredicted RBP3.43□□□□□ -1.86
NSMCE2-211ENST00000523549 WDR43Q15061 677 aaKnown RBP eCLIP3.43□□□□□ -1.86
NSMCE2-211ENST00000523549 NAB2Q15742 525 aa3.43□□□□□ -1.86
NSMCE2-211ENST00000523549 TTI2Q6NXR4 508 aa3.43□□□□□ -1.86
NSMCE2-211ENST00000523549 NCCRP1Q6ZVX7 275 aaPredicted RBP3.43□□□□□ -1.86
NSMCE2-211ENST00000523549 RRM2BQ7LG56 351 aa3.43□□□□□ -1.86
NSMCE2-211ENST00000523549 APLFQ8IW19 511 aaPredicted RBP3.43□□□□□ -1.86
NSMCE2-211ENST00000523549 BEST3Q8N1M1 668 aa3.43□□□□□ -1.86
NSMCE2-211ENST00000523549 CNNM3Q8NE01 707 aa3.43□□□□□ -1.86
NSMCE2-211ENST00000523549 STKLD1Q8NE28 680 aa3.43□□□□□ -1.86
NSMCE2-211ENST00000523549 CSNK2A3Q8NEV1 391 aa3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms