RNA–Protein interactions for RNA: ENST00000523441.1

SDCBP-211, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 543 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-211ENST00000523441 MEF2AQ02078 507 aaPredicted RBP10.86□□□□□ -0.67
SDCBP-211ENST00000523441 CUL1Q13616 776 aa10.86□□□□□ -0.67
SDCBP-211ENST00000523441 POU4F3Q15319 338 aa10.86□□□□□ -0.67
SDCBP-211ENST00000523441 DEFB113Q30KQ7 82 aa10.86□□□□□ -0.67
SDCBP-211ENST00000523441 C11orf63Q6NUN7 778 aa10.86□□□□□ -0.67
SDCBP-211ENST00000523441 TMEM214Q6NUQ4 689 aaKnown RBP10.86□□□□□ -0.67
SDCBP-211ENST00000523441 PAMR1Q6UXH9 720 aa10.86□□□□□ -0.67
SDCBP-211ENST00000523441 B3GNT6Q6ZMB0 384 aa10.86□□□□□ -0.67
SDCBP-211ENST00000523441 EBNA1BP2Q99848 306 aaKnown RBP10.86□□□□□ -0.67
SDCBP-211ENST00000523441 CNPPD1Q9BV87 410 aa10.86□□□□□ -0.67
SDCBP-211ENST00000523441 FAM114A2Q9NRY5 505 aa10.86□□□□□ -0.67
SDCBP-211ENST00000523441 LANCL2Q9NS86 450 aa10.86□□□□□ -0.67
SDCBP-211ENST00000523441 DEPPQ9NTK1 212 aa10.86□□□□□ -0.67
SDCBP-211ENST00000523441 ACAD8Q9UKU7 415 aa10.86□□□□□ -0.67
SDCBP-211ENST00000523441 INTUQ9ULD6 942 aa10.86□□□□□ -0.67
SDCBP-211ENST00000523441 DRG1Q9Y295 367 aaKnown RBP10.86□□□□□ -0.67
SDCBP-211ENST00000523441 PCDHA3Q9Y5H8 950 aa10.86□□□□□ -0.67
SDCBP-211ENST00000523441 MPDZO75970 2070 aa10.85□□□□□ -0.67
SDCBP-211ENST00000523441 GOLGA6L9A6NEM1 432 aa10.85□□□□□ -0.67
SDCBP-211ENST00000523441 FIGNL2A6NMB9 653 aa10.85□□□□□ -0.67
SDCBP-211ENST00000523441 A6NNC1 897 aa10.85□□□□□ -0.67
SDCBP-211ENST00000523441 ZNF839A8K0R7 811 aa10.85□□□□□ -0.67
SDCBP-211ENST00000523441 E7ENX8 843 aa10.85□□□□□ -0.67
SDCBP-211ENST00000523441 ACOT7O00154 380 aa10.85□□□□□ -0.67
SDCBP-211ENST00000523441 MYO1CO00159 1063 aa10.85□□□□□ -0.67
SDCBP-211ENST00000523441 CHST10O43529 356 aa10.85□□□□□ -0.67
SDCBP-211ENST00000523441 LCMT2O60294 686 aaKnown RBP10.85□□□□□ -0.67
SDCBP-211ENST00000523441 MFAP3LO75121 409 aa10.85□□□□□ -0.67
SDCBP-211ENST00000523441 ITGA10O75578 1167 aa10.85□□□□□ -0.67
SDCBP-211ENST00000523441 ERGP11308 486 aa10.85□□□□□ -0.67
SDCBP-211ENST00000523441 ETS1P14921 441 aa10.85□□□□□ -0.67
SDCBP-211ENST00000523441 NMBRP28336 390 aa10.85□□□□□ -0.67
SDCBP-211ENST00000523441 HNF4AP41235 474 aa10.85□□□□□ -0.67
SDCBP-211ENST00000523441 TERF1P54274 439 aa10.85□□□□□ -0.67
SDCBP-211ENST00000523441 RWDD2BP57060 319 aa10.85□□□□□ -0.67
SDCBP-211ENST00000523441 RPS15AP62244 130 aaKnown RBP10.85□□□□□ -0.67
SDCBP-211ENST00000523441 TAP2Q03519 686 aa10.85□□□□□ -0.67
SDCBP-211ENST00000523441 TCEAL1Q15170 157 aa10.85□□□□□ -0.67
SDCBP-211ENST00000523441 DEFB134Q4QY38 66 aa10.85□□□□□ -0.67
SDCBP-211ENST00000523441 RTL6Q6ICC9 239 aa10.85□□□□□ -0.67
SDCBP-211ENST00000523441 IL20RBQ6UXL0 311 aa10.85□□□□□ -0.67
SDCBP-211ENST00000523441 ASPGQ86U10 573 aa10.85□□□□□ -0.67
SDCBP-211ENST00000523441 LGI4Q8N135 537 aa10.85□□□□□ -0.67
SDCBP-211ENST00000523441 CAMKVQ8NCB2 501 aa10.85□□□□□ -0.67
SDCBP-211ENST00000523441 PLPP5Q8NEB5 264 aa10.85□□□□□ -0.67
SDCBP-211ENST00000523441 C16orf52Q8NHV5 167 aa10.85□□□□□ -0.67
SDCBP-211ENST00000523441 SLC13A3Q8WWT9 602 aa10.85□□□□□ -0.67
SDCBP-211ENST00000523441 ATG4AQ8WYN0 398 aa10.85□□□□□ -0.67
SDCBP-211ENST00000523441 ALG3Q92685 438 aa10.85□□□□□ -0.67
SDCBP-211ENST00000523441 TBC1D20Q96BZ9 403 aa10.85□□□□□ -0.67
SDCBP-211ENST00000523441 LDAHQ9H6V9 325 aa10.85□□□□□ -0.67
SDCBP-211ENST00000523441 TIMMDC1Q9NPL8 285 aa10.85□□□□□ -0.67
SDCBP-211ENST00000523441 PNO1Q9NRX1 252 aaKnown RBP10.85□□□□□ -0.67
SDCBP-211ENST00000523441 CBLCQ9ULV8 474 aa10.85□□□□□ -0.67
SDCBP-211ENST00000523441 FAM215AQ9Y5M1 114 aa10.85□□□□□ -0.67
SDCBP-211ENST00000523441 ATP6AP2A0A1C7CYW4 349 aa10.84□□□□□ -0.67
SDCBP-211ENST00000523441 TCRBV7S2A1N4TA0A589 114 aa10.84□□□□□ -0.67
SDCBP-211ENST00000523441 SAGE2PA6NJ88 616 aa10.84□□□□□ -0.67
SDCBP-211ENST00000523441 PSIP1O75475 530 aaKnown RBP10.84□□□□□ -0.67
SDCBP-211ENST00000523441 ATP6AP2O75787 350 aa10.84□□□□□ -0.67
SDCBP-211ENST00000523441 MYO1DO94832 1006 aa10.84□□□□□ -0.67
SDCBP-211ENST00000523441 ATE1O95260 518 aa10.84□□□□□ -0.67
SDCBP-211ENST00000523441 TUBB4AP04350 444 aa10.84□□□□□ -0.67
SDCBP-211ENST00000523441 HEXAP06865 529 aa10.84□□□□□ -0.67
SDCBP-211ENST00000523441 CYC1P08574 325 aa10.84□□□□□ -0.67
SDCBP-211ENST00000523441 PYGBP11216 843 aa10.84□□□□□ -0.67
SDCBP-211ENST00000523441 BMP5P22003 454 aa10.84□□□□□ -0.67
SDCBP-211ENST00000523441 TACR1P25103 407 aa10.84□□□□□ -0.67
SDCBP-211ENST00000523441 MAGEA5P43359 124 aa10.84□□□□□ -0.67
SDCBP-211ENST00000523441 WNT3P56703 355 aa10.84□□□□□ -0.67
SDCBP-211ENST00000523441 ABATP80404 500 aa10.84□□□□□ -0.67
SDCBP-211ENST00000523441 ACVR1Q04771 509 aa10.84□□□□□ -0.67
SDCBP-211ENST00000523441 TRIM14Q14142 442 aa10.84□□□□□ -0.67
SDCBP-211ENST00000523441 KCTD19Q17RG1 926 aaPredicted RBP10.84□□□□□ -0.67
SDCBP-211ENST00000523441 CAPN13Q6MZZ7 669 aaPredicted RBP10.84□□□□□ -0.67
SDCBP-211ENST00000523441 CAMKMTQ7Z624 323 aa10.84□□□□□ -0.67
SDCBP-211ENST00000523441 REXO1L1PQ8IX06 675 aa10.84□□□□□ -0.67
SDCBP-211ENST00000523441 ZFP62Q8NB50 900 aaPredicted RBP10.84□□□□□ -0.67
SDCBP-211ENST00000523441 OR2M7Q8NG81 312 aa10.84□□□□□ -0.67
SDCBP-211ENST00000523441 KIAA1191Q96A73 305 aa10.84□□□□□ -0.67
SDCBP-211ENST00000523441 ARSGQ96EG1 525 aa10.84□□□□□ -0.67
SDCBP-211ENST00000523441 BIRC8Q96P09 236 aa10.84□□□□□ -0.67
SDCBP-211ENST00000523441 SLC30A3Q99726 388 aa10.84□□□□□ -0.67
SDCBP-211ENST00000523441 NEUROD4Q9HD90 331 aa10.84□□□□□ -0.67
SDCBP-211ENST00000523441 CCDC177Q9NQR7 707 aaPredicted RBP10.84□□□□□ -0.67
SDCBP-211ENST00000523441 RAB6BQ9NRW1 208 aa10.84□□□□□ -0.67
SDCBP-211ENST00000523441 TMEM184CQ9NVA4 438 aa10.84□□□□□ -0.67
SDCBP-211ENST00000523441 TRMT1Q9NXH9 659 aaKnown RBP10.84□□□□□ -0.67
SDCBP-211ENST00000523441 PACSIN2Q9UNF0 486 aaPredicted RBP10.84□□□□□ -0.67
SDCBP-211ENST00000523441 PCDHA13Q9Y5I0 950 aa10.84□□□□□ -0.67
SDCBP-211ENST00000523441 NCKAP5O14513 1909 aa10.84□□□□□ -0.67
SDCBP-211ENST00000523441 MYOCOSA0A1B0GUC4 107 aa10.83□□□□□ -0.68
SDCBP-211ENST00000523441 A8MVJ9 347 aa10.83□□□□□ -0.68
SDCBP-211ENST00000523441 HAX1O00165 279 aa10.83□□□□□ -0.68
SDCBP-211ENST00000523441 NDUFS4O43181 175 aa10.83□□□□□ -0.68
SDCBP-211ENST00000523441 KIF5CO60282 957 aa10.83□□□□□ -0.68
SDCBP-211ENST00000523441 VAPBO95292 243 aa10.83□□□□□ -0.68
SDCBP-211ENST00000523441 APRTP07741 180 aa10.83□□□□□ -0.68
SDCBP-211ENST00000523441 CELA3AP09093 270 aa10.83□□□□□ -0.68
SDCBP-211ENST00000523441 SLC35G6P0C7Q6 338 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms