RNA–Protein interactions for RNA: ENST00000522240.1

CPNE3-205, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 446 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-205ENST00000522240 APIPQ96GX9 242 aa12.47□□□□□ -0.41
CPNE3-205ENST00000522240 NUDT22Q9BRQ3 303 aa12.47□□□□□ -0.41
CPNE3-205ENST00000522240 SLC6A16Q9GZN6 736 aa12.47□□□□□ -0.41
CPNE3-205ENST00000522240 TMEM45AQ9NWC5 275 aa12.47□□□□□ -0.41
CPNE3-205ENST00000522240 AHSPQ9NZD4 102 aa12.47□□□□□ -0.41
CPNE3-205ENST00000522240 PDP2Q9P2J9 529 aa12.47□□□□□ -0.41
CPNE3-205ENST00000522240 EIF3LQ9Y262 564 aaKnown RBP12.47□□□□□ -0.41
CPNE3-205ENST00000522240 RUVBL1Q9Y265 456 aaKnown RBP12.47□□□□□ -0.41
CPNE3-205ENST00000522240 COPG1Q9Y678 874 aaKnown RBP12.47□□□□□ -0.41
CPNE3-205ENST00000522240 CAPN7Q9Y6W3 813 aa12.47□□□□□ -0.41
CPNE3-205ENST00000522240 CNOT1A5YKK6 2376 aaKnown RBP12.46□□□□□ -0.41
CPNE3-205ENST00000522240 IGHV5-51A0A0C4DH38 117 aa12.46□□□□□ -0.41
CPNE3-205ENST00000522240 A0A0J9YVX5 310 aa12.46□□□□□ -0.41
CPNE3-205ENST00000522240 A0A1W2PQM1 296 aa12.46□□□□□ -0.41
CPNE3-205ENST00000522240 SLC9B1P1A6NJY1 282 aa12.46□□□□□ -0.41
CPNE3-205ENST00000522240 CCT8L1PA6NM43 557 aa12.46□□□□□ -0.41
CPNE3-205ENST00000522240 NTN3O00634 580 aaPredicted RBP12.46□□□□□ -0.41
CPNE3-205ENST00000522240 CBFA2T3O75081 653 aa12.46□□□□□ -0.41
CPNE3-205ENST00000522240 RASSF9O75901 435 aa12.46□□□□□ -0.41
CPNE3-205ENST00000522240 MSL3P1P0C860 447 aa12.46□□□□□ -0.41
CPNE3-205ENST00000522240 PRPS2P11908 318 aa12.46□□□□□ -0.41
CPNE3-205ENST00000522240 TIA1P31483 386 aaKnown RBP eCLIP12.46□□□□□ -0.41
CPNE3-205ENST00000522240 TSFMP43897 325 aaKnown RBP12.46□□□□□ -0.41
CPNE3-205ENST00000522240 CCL7P80098 99 aa12.46□□□□□ -0.41
CPNE3-205ENST00000522240 RFTN2Q52LD8 501 aaPredicted RBP12.46□□□□□ -0.41
CPNE3-205ENST00000522240 CACHD1Q5VU97 1274 aa12.46□□□□□ -0.41
CPNE3-205ENST00000522240 FBXO42Q6P3S6 717 aa12.46□□□□□ -0.41
CPNE3-205ENST00000522240 PAGE2Q7Z2X7 111 aa12.46□□□□□ -0.41
CPNE3-205ENST00000522240 DNAJC22Q8N4W6 341 aa12.46□□□□□ -0.41
CPNE3-205ENST00000522240 CAMKVQ8NCB2 501 aa12.46□□□□□ -0.41
CPNE3-205ENST00000522240 SRFBP1Q8NEF9 429 aaKnown RBP12.46□□□□□ -0.41
CPNE3-205ENST00000522240 KLHL6Q8WZ60 621 aa12.46□□□□□ -0.41
CPNE3-205ENST00000522240 GAL3ST3Q96A11 431 aa12.46□□□□□ -0.41
CPNE3-205ENST00000522240 RERGQ96A58 199 aaPredicted RBP12.46□□□□□ -0.41
CPNE3-205ENST00000522240 SLC41A2Q96JW4 573 aa12.46□□□□□ -0.41
CPNE3-205ENST00000522240 MARK4Q96L34 752 aa12.46□□□□□ -0.41
CPNE3-205ENST00000522240 CDC6Q99741 560 aa12.46□□□□□ -0.41
CPNE3-205ENST00000522240 C1orf50Q9BV19 199 aa12.46□□□□□ -0.41
CPNE3-205ENST00000522240 CCDC106Q9BWC9 280 aa12.46□□□□□ -0.41
CPNE3-205ENST00000522240 MRPL1Q9BYD6 325 aaKnown RBP12.46□□□□□ -0.41
CPNE3-205ENST00000522240 KLHL25Q9H0H3 589 aa12.46□□□□□ -0.41
CPNE3-205ENST00000522240 OR51B5Q9H339 312 aa12.46□□□□□ -0.41
CPNE3-205ENST00000522240 ZNF768Q9H5H4 540 aaKnown RBP12.46□□□□□ -0.41
CPNE3-205ENST00000522240 SYNPO2LQ9H987 977 aa12.46□□□□□ -0.41
CPNE3-205ENST00000522240 PDE7BQ9NP56 450 aa12.46□□□□□ -0.41
CPNE3-205ENST00000522240 SDR39U1Q9NRG7 319 aaPredicted RBP12.46□□□□□ -0.41
CPNE3-205ENST00000522240 RXFP3Q9NSD7 469 aa12.46□□□□□ -0.41
CPNE3-205ENST00000522240 SOHLH2Q9NX45 425 aa12.46□□□□□ -0.41
CPNE3-205ENST00000522240 ZIM2Q9NZV7 527 aa12.46□□□□□ -0.41
CPNE3-205ENST00000522240 ADAM29Q9UKF5 820 aa12.46□□□□□ -0.41
CPNE3-205ENST00000522240 POLR3HQ9Y535 204 aaPredicted RBP12.46□□□□□ -0.41
CPNE3-205ENST00000522240 GPR45Q9Y5Y3 372 aa12.46□□□□□ -0.41
CPNE3-205ENST00000522240 MDC1Q14676 2089 aaKnown RBP12.46□□□□□ -0.42
CPNE3-205ENST00000522240 LRIT2A6NDA9 550 aa12.45□□□□□ -0.42
CPNE3-205ENST00000522240 URADA6NGE7 173 aa12.45□□□□□ -0.42
CPNE3-205ENST00000522240 D6RAR5 112 aa12.45□□□□□ -0.42
CPNE3-205ENST00000522240 H0YGG7 62 aa12.45□□□□□ -0.42
CPNE3-205ENST00000522240 PLPP1O14494 284 aa12.45□□□□□ -0.42
CPNE3-205ENST00000522240 TXNDC9O14530 226 aa12.45□□□□□ -0.42
CPNE3-205ENST00000522240 ZSCAN9O15535 394 aaPredicted RBP12.45□□□□□ -0.42
CPNE3-205ENST00000522240 KIF1CO43896 1103 aaKnown RBP12.45□□□□□ -0.42
CPNE3-205ENST00000522240 SRPX2O60687 465 aaPredicted RBP12.45□□□□□ -0.42
CPNE3-205ENST00000522240 MYO1DO94832 1006 aa12.45□□□□□ -0.42
CPNE3-205ENST00000522240 THRAP10827 490 aa12.45□□□□□ -0.42
CPNE3-205ENST00000522240 SDC1P18827 310 aa12.45□□□□□ -0.42
CPNE3-205ENST00000522240 PRDX6P30041 224 aa12.45□□□□□ -0.42
CPNE3-205ENST00000522240 HNRNPH1P31943 449 aaKnown RBP12.45□□□□□ -0.42
CPNE3-205ENST00000522240 GSTM5P46439 218 aa12.45□□□□□ -0.42
CPNE3-205ENST00000522240 GABRA4P48169 554 aa12.45□□□□□ -0.42
CPNE3-205ENST00000522240 ACADVLP49748 655 aa12.45□□□□□ -0.42
CPNE3-205ENST00000522240 RAP1GDS1P52306 607 aa12.45□□□□□ -0.42
CPNE3-205ENST00000522240 DIO3P55073 304 aa12.45□□□□□ -0.42
CPNE3-205ENST00000522240 ARF3P61204 181 aaPredicted RBP12.45□□□□□ -0.42
CPNE3-205ENST00000522240 HSD11B2P80365 405 aa12.45□□□□□ -0.42
CPNE3-205ENST00000522240 TGM3Q08188 693 aa12.45□□□□□ -0.42
CPNE3-205ENST00000522240 HYAL2Q12891 473 aa12.45□□□□□ -0.42
CPNE3-205ENST00000522240 KLF10Q13118 480 aa12.45□□□□□ -0.42
CPNE3-205ENST00000522240 ILKQ13418 452 aa12.45□□□□□ -0.42
CPNE3-205ENST00000522240 UBAP2LQ14157 1087 aaKnown RBP12.45□□□□□ -0.42
CPNE3-205ENST00000522240 KRT72Q14CN4 511 aa12.45□□□□□ -0.42
CPNE3-205ENST00000522240 HERC3Q15034 1050 aa12.45□□□□□ -0.42
CPNE3-205ENST00000522240 IL23RQ5VWK5 629 aa12.45□□□□□ -0.42
CPNE3-205ENST00000522240 FRMPD2BQ6IN97 320 aa12.45□□□□□ -0.42
CPNE3-205ENST00000522240 NOXRED1Q6NXP6 359 aa12.45□□□□□ -0.42
CPNE3-205ENST00000522240 COMMD6Q7Z4G1 85 aa12.45□□□□□ -0.42
CPNE3-205ENST00000522240 MIER2Q8N344 545 aa12.45□□□□□ -0.42
CPNE3-205ENST00000522240 C1orf52Q8N6N3 182 aaKnown RBP12.45□□□□□ -0.42
CPNE3-205ENST00000522240 OR2L5Q8NG80 312 aa12.45□□□□□ -0.42
CPNE3-205ENST00000522240 SLC13A3Q8WWT9 602 aa12.45□□□□□ -0.42
CPNE3-205ENST00000522240 RGMAQ96B86 450 aa12.45□□□□□ -0.42
CPNE3-205ENST00000522240 ZNF285Q96NJ3 590 aa12.45□□□□□ -0.42
CPNE3-205ENST00000522240 QRFPRQ96P65 431 aa12.45□□□□□ -0.42
CPNE3-205ENST00000522240 FCRL4Q96PJ5 515 aa12.45□□□□□ -0.42
CPNE3-205ENST00000522240 GFM1Q96RP9 751 aaKnown RBP12.45□□□□□ -0.42
CPNE3-205ENST00000522240 NLNQ9BYT8 704 aa12.45□□□□□ -0.42
CPNE3-205ENST00000522240 REXO4Q9GZR2 422 aaKnown RBP12.45□□□□□ -0.42
CPNE3-205ENST00000522240 FAM60AQ9NP50 221 aa12.45□□□□□ -0.42
CPNE3-205ENST00000522240 ENAMQ9NRM1 1142 aa12.45□□□□□ -0.42
CPNE3-205ENST00000522240 TMEM9Q9P0T7 183 aa12.45□□□□□ -0.42
CPNE3-205ENST00000522240 MCM8Q9UJA3 840 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms