RNA–Protein interactions for RNA: ENST00000521559.1

VPS13B-209, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 466 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-209ENST00000521559 CEP290O15078 2479 aa3.13□□□□□ -1.91
VPS13B-209ENST00000521559 CITO14578 2027 aa3.12□□□□□ -1.91
VPS13B-209ENST00000521559 ANK1P16157 1881 aa3.12□□□□□ -1.91
VPS13B-209ENST00000521559 PLXNA4Q9HCM2 1894 aa3.12□□□□□ -1.91
VPS13B-209ENST00000521559 COL4A4P53420 1690 aaPredicted RBP3.12□□□□□ -1.91
VPS13B-209ENST00000521559 IGLV3-10A0A075B6K4 115 aa3.12□□□□□ -1.91
VPS13B-209ENST00000521559 SYNJ2BP-COX16A0A087WUM0 186 aa3.12□□□□□ -1.91
VPS13B-209ENST00000521559 A0A087WYN8 130 aa3.12□□□□□ -1.91
VPS13B-209ENST00000521559 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP3.12□□□□□ -1.91
VPS13B-209ENST00000521559 CBY3A6NI87 242 aa3.12□□□□□ -1.91
VPS13B-209ENST00000521559 B4E171 279 aa3.12□□□□□ -1.91
VPS13B-209ENST00000521559 TEX22C9J3V5 150 aa3.12□□□□□ -1.91
VPS13B-209ENST00000521559 PRAC2D3DTV9 90 aa3.12□□□□□ -1.91
VPS13B-209ENST00000521559 F5H5T6 163 aa3.12□□□□□ -1.91
VPS13B-209ENST00000521559 TRDMT1O14717 391 aaKnown RBP3.12□□□□□ -1.91
VPS13B-209ENST00000521559 ZSCAN12O43309 604 aa3.12□□□□□ -1.91
VPS13B-209ENST00000521559 DCXO43602 365 aa3.12□□□□□ -1.91
VPS13B-209ENST00000521559 TIMM44O43615 452 aa3.12□□□□□ -1.91
VPS13B-209ENST00000521559 PRPSAP2O60256 369 aa3.12□□□□□ -1.91
VPS13B-209ENST00000521559 CACNG3O60359 315 aa3.12□□□□□ -1.91
VPS13B-209ENST00000521559 LRCH4O75427 683 aa3.12□□□□□ -1.91
VPS13B-209ENST00000521559 MOCS3O95396 460 aa3.12□□□□□ -1.91
VPS13B-209ENST00000521559 CLDN14O95500 239 aa3.12□□□□□ -1.91
VPS13B-209ENST00000521559 MOCS2O96007 188 aaPredicted RBP3.12□□□□□ -1.91
VPS13B-209ENST00000521559 PENKP01210 267 aaPredicted RBP3.12□□□□□ -1.91
VPS13B-209ENST00000521559 UMODP07911 640 aa3.12□□□□□ -1.91
VPS13B-209ENST00000521559 SP1P08047 785 aa3.12□□□□□ -1.91
VPS13B-209ENST00000521559 KRT7P08729 469 aa3.12□□□□□ -1.91
VPS13B-209ENST00000521559 CISD3P0C7P0 127 aa3.12□□□□□ -1.91
VPS13B-209ENST00000521559 SSTR2P30874 369 aa3.12□□□□□ -1.91
VPS13B-209ENST00000521559 TSPAN7P41732 249 aa3.12□□□□□ -1.91
VPS13B-209ENST00000521559 HCAR3P49019 387 aa3.12□□□□□ -1.91
VPS13B-209ENST00000521559 NAP1L1P55209 391 aaKnown RBP3.12□□□□□ -1.91
VPS13B-209ENST00000521559 TAS2R40P59535 323 aa3.12□□□□□ -1.91
VPS13B-209ENST00000521559 RPS24P62847 133 aaKnown RBP3.12□□□□□ -1.91
VPS13B-209ENST00000521559 EFNB1P98172 346 aa3.12□□□□□ -1.91
VPS13B-209ENST00000521559 SLC25A11Q02978 314 aaKnown RBP3.12□□□□□ -1.91
VPS13B-209ENST00000521559 GALNT2Q10471 571 aa3.12□□□□□ -1.91
VPS13B-209ENST00000521559 ILF3Q12906 894 aaKnown RBP eCLIP3.12□□□□□ -1.91
VPS13B-209ENST00000521559 ZNF177Q13360 481 aaPredicted RBP3.12□□□□□ -1.91
VPS13B-209ENST00000521559 MESDQ14696 234 aa3.12□□□□□ -1.91
VPS13B-209ENST00000521559 TAF11Q15544 211 aa3.12□□□□□ -1.91
VPS13B-209ENST00000521559 CDO1Q16878 200 aa3.12□□□□□ -1.91
VPS13B-209ENST00000521559 MPPE1Q53F39 396 aa3.12□□□□□ -1.91
VPS13B-209ENST00000521559 RAB6CQ53S08 254 aa3.12□□□□□ -1.91
VPS13B-209ENST00000521559 ESCO2Q56NI9 601 aa3.12□□□□□ -1.91
VPS13B-209ENST00000521559 FAM133BQ5BKY9 247 aaKnown RBP3.12□□□□□ -1.91
VPS13B-209ENST00000521559 ZNF766Q5HY98 468 aa3.12□□□□□ -1.91
VPS13B-209ENST00000521559 MS4A13Q5J8X5 152 aa3.12□□□□□ -1.91
VPS13B-209ENST00000521559 ERMARDQ5T6L9 678 aa3.12□□□□□ -1.91
VPS13B-209ENST00000521559 LRRC38Q5VT99 294 aa3.12□□□□□ -1.91
VPS13B-209ENST00000521559 TXNRD3NBQ6F5E7 133 aa3.12□□□□□ -1.91
VPS13B-209ENST00000521559 C11orf63Q6NUN7 778 aa3.12□□□□□ -1.91
VPS13B-209ENST00000521559 FBXL22Q6P050 247 aa3.12□□□□□ -1.91
VPS13B-209ENST00000521559 RFWD3Q6PCD5 774 aa3.12□□□□□ -1.91
VPS13B-209ENST00000521559 LRRC31Q6UY01 552 aa3.12□□□□□ -1.91
VPS13B-209ENST00000521559 TPGS1Q6ZTW0 290 aa3.12□□□□□ -1.91
VPS13B-209ENST00000521559 CYP4V2Q6ZWL3 525 aaPredicted RBP3.12□□□□□ -1.91
VPS13B-209ENST00000521559 MOB3CQ70IA8 216 aa3.12□□□□□ -1.91
VPS13B-209ENST00000521559 SLFN11Q7Z7L1 901 aa3.12□□□□□ -1.91
VPS13B-209ENST00000521559 RALGPS2Q86X27 583 aaPredicted RBP3.12□□□□□ -1.91
VPS13B-209ENST00000521559 DCUN1D3Q8IWE4 304 aa3.12□□□□□ -1.91
VPS13B-209ENST00000521559 ZNF683Q8IZ20 524 aa3.12□□□□□ -1.91
VPS13B-209ENST00000521559 LGI2Q8N0V4 545 aa3.12□□□□□ -1.91
VPS13B-209ENST00000521559 RNF10Q8N5U6 811 aaKnown RBP3.12□□□□□ -1.91
VPS13B-209ENST00000521559 CCDC185Q8N715 623 aa3.12□□□□□ -1.91
VPS13B-209ENST00000521559 HJURPQ8NCD3 748 aaPredicted RBP3.12□□□□□ -1.91
VPS13B-209ENST00000521559 FIBINQ8TAL6 211 aa3.12□□□□□ -1.91
VPS13B-209ENST00000521559 KIAA1524Q8TCG1 905 aa3.12□□□□□ -1.91
VPS13B-209ENST00000521559 DDI1Q8WTU0 396 aa3.12□□□□□ -1.91
VPS13B-209ENST00000521559 TEKT4Q8WW24 435 aa3.12□□□□□ -1.91
VPS13B-209ENST00000521559 SORCS1Q8WY21 1168 aa3.12□□□□□ -1.91
VPS13B-209ENST00000521559 TANKQ92844 425 aa3.12□□□□□ -1.91
VPS13B-209ENST00000521559 IGSF8Q969P0 613 aa3.12□□□□□ -1.91
VPS13B-209ENST00000521559 EXOC4Q96A65 974 aa3.12□□□□□ -1.91
VPS13B-209ENST00000521559 MSANTD3Q96H12 275 aa3.12□□□□□ -1.91
VPS13B-209ENST00000521559 C3orf30Q96M34 536 aa3.12□□□□□ -1.91
VPS13B-209ENST00000521559 UHRF2Q96PU4 802 aa3.12□□□□□ -1.91
VPS13B-209ENST00000521559 PEBP4Q96S96 227 aa3.12□□□□□ -1.91
VPS13B-209ENST00000521559 FUZQ9BT04 418 aa3.12□□□□□ -1.91
VPS13B-209ENST00000521559 BBS2Q9BXC9 721 aa3.12□□□□□ -1.91
VPS13B-209ENST00000521559 SLC2A11Q9BYW1 496 aa3.12□□□□□ -1.91
VPS13B-209ENST00000521559 RAB6CQ9H0N0 254 aa3.12□□□□□ -1.91
VPS13B-209ENST00000521559 EBF2Q9HAK2 575 aa3.12□□□□□ -1.91
VPS13B-209ENST00000521559 GPATCH2LQ9NWQ4 482 aa3.12□□□□□ -1.91
VPS13B-209ENST00000521559 GTSE1Q9NYZ3 720 aa3.12□□□□□ -1.91
VPS13B-209ENST00000521559 MPP6Q9NZW5 540 aa3.12□□□□□ -1.91
VPS13B-209ENST00000521559 COX16Q9P0S2 106 aa3.12□□□□□ -1.91
VPS13B-209ENST00000521559 TRIM10Q9UDY6 481 aa3.12□□□□□ -1.91
VPS13B-209ENST00000521559 OR12D3Q9UGF7 316 aa3.12□□□□□ -1.91
VPS13B-209ENST00000521559 PCSK1NQ9UHG2 260 aa3.12□□□□□ -1.91
VPS13B-209ENST00000521559 MUTYHQ9UIF7 546 aa3.12□□□□□ -1.91
VPS13B-209ENST00000521559 CDC14AQ9UNH5 594 aa3.12□□□□□ -1.91
VPS13B-209ENST00000521559 TFR2Q9UP52 801 aa3.12□□□□□ -1.91
VPS13B-209ENST00000521559 HYOU1Q9Y4L1 999 aa3.12□□□□□ -1.91
VPS13B-209ENST00000521559 SNX10Q9Y5X0 201 aa3.12□□□□□ -1.91
VPS13B-209ENST00000521559 ALG6Q9Y672 507 aa3.12□□□□□ -1.91
VPS13B-209ENST00000521559 A3GALT2U3KPV4 340 aa3.12□□□□□ -1.91
VPS13B-209ENST00000521559 TDRD15B5MCY1 1934 aaKnown RBP3.12□□□□□ -1.91
VPS13B-209ENST00000521559 PRRC2BQ5JSZ5 2229 aaKnown RBP3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms