RNA–Protein interactions for RNA: ENST00000521253.1

TRIM35-203, Transcript of tripartite motif containing 35, humanhuman

TSL 1 (best) BASIC

Gene TRIM35, Length 1,215 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-203ENST00000521253 OPTCQ9UBM4 332 aa19.53■□□□□ 0.72
TRIM35-203ENST00000521253 MKL2Q9ULH7 1088 aa19.53■□□□□ 0.72
TRIM35-203ENST00000521253 G3BP2Q9UN86 482 aaKnown RBP19.53■□□□□ 0.72
TRIM35-203ENST00000521253 K7EPI3 171 aa19.52■□□□□ 0.72
TRIM35-203ENST00000521253 KLK8O60259 260 aa19.52■□□□□ 0.72
TRIM35-203ENST00000521253 ZNF500O60304 480 aaPredicted RBP19.52■□□□□ 0.72
TRIM35-203ENST00000521253 SOX8P57073 446 aa19.52■□□□□ 0.72
TRIM35-203ENST00000521253 RAB8AP61006 207 aa19.52■□□□□ 0.72
TRIM35-203ENST00000521253 IRF8Q02556 426 aa19.52■□□□□ 0.72
TRIM35-203ENST00000521253 KLRB1Q12918 225 aa19.52■□□□□ 0.72
TRIM35-203ENST00000521253 AIMP2Q13155 320 aaKnown RBP19.52■□□□□ 0.72
TRIM35-203ENST00000521253 CHIT1Q13231 466 aa19.52■□□□□ 0.72
TRIM35-203ENST00000521253 SETDB1Q15047 1291 aa19.52■□□□□ 0.72
TRIM35-203ENST00000521253 TOR1AIP1Q5JTV8 583 aa19.52■□□□□ 0.72
TRIM35-203ENST00000521253 COLEC12Q5KU26 742 aa19.52■□□□□ 0.72
TRIM35-203ENST00000521253 FAAH2Q6GMR7 532 aa19.52■□□□□ 0.72
TRIM35-203ENST00000521253 ADGRD1Q6QNK2 874 aa19.52■□□□□ 0.72
TRIM35-203ENST00000521253 TTLQ8NG68 377 aa19.52■□□□□ 0.72
TRIM35-203ENST00000521253 EFCAB11Q9BUY7 163 aa19.52■□□□□ 0.72
TRIM35-203ENST00000521253 VN1R1Q9GZP7 353 aa19.52■□□□□ 0.72
TRIM35-203ENST00000521253 ZNF490Q9ULM2 529 aaPredicted RBP19.52■□□□□ 0.72
TRIM35-203ENST00000521253 PCDHGB7Q9Y5F8 929 aa19.52■□□□□ 0.72
TRIM35-203ENST00000521253 URADA6NGE7 173 aa19.51■□□□□ 0.71
TRIM35-203ENST00000521253 C4orf51C9J302 202 aa19.51■□□□□ 0.71
TRIM35-203ENST00000521253 DNAJB6O75190 326 aa19.51■□□□□ 0.71
TRIM35-203ENST00000521253 SMIM10L1P0DMW3 83 aa19.51■□□□□ 0.71
TRIM35-203ENST00000521253 COL6A2P12110 1019 aa19.51■□□□□ 0.71
TRIM35-203ENST00000521253 GSTM2P28161 218 aa19.51■□□□□ 0.71
TRIM35-203ENST00000521253 TNFRSF8P28908 595 aa19.51■□□□□ 0.71
TRIM35-203ENST00000521253 CASP2P42575 452 aa19.51■□□□□ 0.71
TRIM35-203ENST00000521253 ALDH18A1P54886 795 aaKnown RBP19.51■□□□□ 0.71
TRIM35-203ENST00000521253 SKP1P63208 163 aa19.51■□□□□ 0.71
TRIM35-203ENST00000521253 OLR1P78380 273 aa19.51■□□□□ 0.71
TRIM35-203ENST00000521253 E2F2Q14209 437 aa19.51■□□□□ 0.71
TRIM35-203ENST00000521253 MYBPC3Q14896 1274 aa19.51■□□□□ 0.71
TRIM35-203ENST00000521253 TBCCQ15814 346 aa19.51■□□□□ 0.71
TRIM35-203ENST00000521253 MINDY4Q4G0A6 757 aa19.51■□□□□ 0.71
TRIM35-203ENST00000521253 LGSNQ5TDP6 509 aa19.51■□□□□ 0.71
TRIM35-203ENST00000521253 ADNP2Q6IQ32 1131 aa19.51■□□□□ 0.71
TRIM35-203ENST00000521253 NIPAL1Q6NVV3 410 aa19.51■□□□□ 0.71
TRIM35-203ENST00000521253 ATG14Q6ZNE5 492 aa19.51■□□□□ 0.71
TRIM35-203ENST00000521253 VN1R5Q7Z5H4 357 aa19.51■□□□□ 0.71
TRIM35-203ENST00000521253 TEX19Q8NA77 164 aa19.51■□□□□ 0.71
TRIM35-203ENST00000521253 CCT6BQ92526 530 aa19.51■□□□□ 0.71
TRIM35-203ENST00000521253 SMIM10Q96HG1 83 aa19.51■□□□□ 0.71
TRIM35-203ENST00000521253 SEC16BQ96JE7 1060 aa19.51■□□□□ 0.71
TRIM35-203ENST00000521253 SMAD5Q99717 465 aaKnown RBP19.51■□□□□ 0.71
TRIM35-203ENST00000521253 ANKZF1Q9H8Y5 726 aa19.51■□□□□ 0.71
TRIM35-203ENST00000521253 CPSF2Q9P2I0 782 aaKnown RBP19.51■□□□□ 0.71
TRIM35-203ENST00000521253 ANAPC2Q9UJX6 822 aa19.51■□□□□ 0.71
TRIM35-203ENST00000521253 ZNF451Q9Y4E5 1061 aa19.51■□□□□ 0.71
TRIM35-203ENST00000521253 SPENQ96T58 3664 aaKnown RBP19.51■□□□□ 0.71
TRIM35-203ENST00000521253 OR2W5A6NFC9 320 aa19.5■□□□□ 0.71
TRIM35-203ENST00000521253 LRRC14BA6NHZ5 514 aa19.5■□□□□ 0.71
TRIM35-203ENST00000521253 CLEC3AO75596 197 aa19.5■□□□□ 0.71
TRIM35-203ENST00000521253 WFS1O76024 890 aa19.5■□□□□ 0.71
TRIM35-203ENST00000521253 HPP00738 406 aa19.5■□□□□ 0.71
TRIM35-203ENST00000521253 RBP1P09455 135 aa19.5■□□□□ 0.71
TRIM35-203ENST00000521253 COX6A1P12074 109 aa19.5■□□□□ 0.71
TRIM35-203ENST00000521253 EPB42P16452 691 aa19.5■□□□□ 0.71
TRIM35-203ENST00000521253 ITGA3P26006 1051 aa19.5■□□□□ 0.71
TRIM35-203ENST00000521253 HNRNPH1P31943 449 aaKnown RBP19.5■□□□□ 0.71
TRIM35-203ENST00000521253 EEF1A2Q05639 463 aaKnown RBP19.5■□□□□ 0.71
TRIM35-203ENST00000521253 NAA30Q147X3 362 aaPredicted RBP19.5■□□□□ 0.71
TRIM35-203ENST00000521253 TSNAXIP1Q2TAA8 658 aa19.5■□□□□ 0.71
TRIM35-203ENST00000521253 PAGE2BQ5JRK9 111 aa19.5■□□□□ 0.71
TRIM35-203ENST00000521253 MFSD4BQ5TF39 518 aa19.5■□□□□ 0.71
TRIM35-203ENST00000521253 VWA5B1Q5TIE3 1220 aa19.5■□□□□ 0.71
TRIM35-203ENST00000521253 TMEM205Q6UW68 189 aa19.5■□□□□ 0.71
TRIM35-203ENST00000521253 PARP9Q8IXQ6 854 aa19.5■□□□□ 0.71
TRIM35-203ENST00000521253 TEX9Q8N6V9 391 aa19.5■□□□□ 0.71
TRIM35-203ENST00000521253 PEX11GQ96HA9 241 aa19.5■□□□□ 0.71
TRIM35-203ENST00000521253 RBCK1Q9BYM8 510 aa19.5■□□□□ 0.71
TRIM35-203ENST00000521253 ZNF552Q9H707 407 aaPredicted RBP19.5■□□□□ 0.71
TRIM35-203ENST00000521253 ZNF160Q9HCG1 818 aa19.5■□□□□ 0.71
TRIM35-203ENST00000521253 XPR1Q9UBH6 696 aa19.5■□□□□ 0.71
TRIM35-203ENST00000521253 SCN3AQ9NY46 2000 aa19.49■□□□□ 0.71
TRIM35-203ENST00000521253 LOC102723996A0A087X1L8 192 aa19.49■□□□□ 0.71
TRIM35-203ENST00000521253 A0A1W2PQ72 361 aa19.49■□□□□ 0.71
TRIM35-203ENST00000521253 LRIT2A6NDA9 550 aa19.49■□□□□ 0.71
TRIM35-203ENST00000521253 ANKDD1BA6NHY2 528 aa19.49■□□□□ 0.71
TRIM35-203ENST00000521253 PCDH17O14917 1159 aa19.49■□□□□ 0.71
TRIM35-203ENST00000521253 CHST10O43529 356 aa19.49■□□□□ 0.71
TRIM35-203ENST00000521253 TBX6O95947 436 aaPredicted RBP19.49■□□□□ 0.71
TRIM35-203ENST00000521253 C8orf89P0DMQ9 161 aa19.49■□□□□ 0.71
TRIM35-203ENST00000521253 STXBP1P61764 594 aaKnown RBP19.49■□□□□ 0.71
TRIM35-203ENST00000521253 PCDH1Q08174 1060 aa19.49■□□□□ 0.71
TRIM35-203ENST00000521253 Q0VFX4 171 aa19.49■□□□□ 0.71
TRIM35-203ENST00000521253 LAPTM5Q13571 262 aa19.49■□□□□ 0.71
TRIM35-203ENST00000521253 TIFABQ6ZNK6 161 aa19.49■□□□□ 0.71
TRIM35-203ENST00000521253 NDUFAF7Q7L592 441 aa19.49■□□□□ 0.71
TRIM35-203ENST00000521253 GAL3ST3Q96A11 431 aa19.49■□□□□ 0.71
TRIM35-203ENST00000521253 MTBPQ96DY7 904 aa19.49■□□□□ 0.71
TRIM35-203ENST00000521253 SCYL1Q96KG9 808 aa19.49■□□□□ 0.71
TRIM35-203ENST00000521253 OR1F2PQ96R84 312 aa19.49■□□□□ 0.71
TRIM35-203ENST00000521253 EPN3Q9H201 632 aa19.49■□□□□ 0.71
TRIM35-203ENST00000521253 RHBGQ9H310 441 aa19.49■□□□□ 0.71
TRIM35-203ENST00000521253 LANCL2Q9NS86 450 aa19.49■□□□□ 0.71
TRIM35-203ENST00000521253 FETUBQ9UGM5 382 aa19.49■□□□□ 0.71
TRIM35-203ENST00000521253 IGHV1-45A0A0A0MS14 117 aa19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms