RNA–Protein interactions for RNA: ENST00000520228.1

SDCBP-208, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-208ENST00000520228 J3KR12 359 aa6.78□□□□□ -1.32
SDCBP-208ENST00000520228 DFFAO00273 331 aa6.78□□□□□ -1.32
SDCBP-208ENST00000520228 KPNA3O00505 521 aaPredicted RBP6.78□□□□□ -1.32
SDCBP-208ENST00000520228 EBAG9O00559 213 aa6.78□□□□□ -1.32
SDCBP-208ENST00000520228 PRAMEF11O60813 436 aa6.78□□□□□ -1.32
SDCBP-208ENST00000520228 ZNF821O75541 412 aaPredicted RBP6.78□□□□□ -1.32
SDCBP-208ENST00000520228 POP4O95707 220 aaKnown RBP6.78□□□□□ -1.32
SDCBP-208ENST00000520228 TOMM40O96008 361 aa6.78□□□□□ -1.32
SDCBP-208ENST00000520228 GSRP00390 522 aa6.78□□□□□ -1.32
SDCBP-208ENST00000520228 CTSLP07711 333 aa6.78□□□□□ -1.32
SDCBP-208ENST00000520228 ENO3P13929 434 aaPredicted RBP6.78□□□□□ -1.32
SDCBP-208ENST00000520228 GNSP15586 552 aa6.78□□□□□ -1.32
SDCBP-208ENST00000520228 CTPS1P17812 591 aa6.78□□□□□ -1.32
SDCBP-208ENST00000520228 IL4RP24394 825 aa6.78□□□□□ -1.32
SDCBP-208ENST00000520228 RYKP34925 604 aa6.78□□□□□ -1.32
SDCBP-208ENST00000520228 SLC1A1P43005 524 aa6.78□□□□□ -1.32
SDCBP-208ENST00000520228 CCNHP51946 323 aaPredicted RBP6.78□□□□□ -1.32
SDCBP-208ENST00000520228 METAP1P53582 386 aa6.78□□□□□ -1.32
SDCBP-208ENST00000520228 CDH6P55285 790 aa6.78□□□□□ -1.32
SDCBP-208ENST00000520228 TMPRSS3P57727 454 aa6.78□□□□□ -1.32
SDCBP-208ENST00000520228 TAS2R40P59535 323 aa6.78□□□□□ -1.32
SDCBP-208ENST00000520228 UFM1P61960 85 aa6.78□□□□□ -1.32
SDCBP-208ENST00000520228 SNRPD1P62314 119 aaKnown RBP6.78□□□□□ -1.32
SDCBP-208ENST00000520228 CNTN1Q12860 1018 aa6.78□□□□□ -1.32
SDCBP-208ENST00000520228 PTGR1Q14914 329 aa6.78□□□□□ -1.32
SDCBP-208ENST00000520228 PDK2Q15119 407 aa6.78□□□□□ -1.32
SDCBP-208ENST00000520228 DUOXA1Q1HG43 343 aa6.78□□□□□ -1.32
SDCBP-208ENST00000520228 MYLK3Q32MK0 819 aa6.78□□□□□ -1.32
SDCBP-208ENST00000520228 WASHC2DQ5SRD0 308 aa6.78□□□□□ -1.32
SDCBP-208ENST00000520228 TCEAL6Q6IPX3 200 aa6.78□□□□□ -1.32
SDCBP-208ENST00000520228 HEPHL1Q6MZM0 1159 aa6.78□□□□□ -1.32
SDCBP-208ENST00000520228 INO80CQ6PI98 192 aaPredicted RBP6.78□□□□□ -1.32
SDCBP-208ENST00000520228 NCEH1Q6PIU2 408 aa6.78□□□□□ -1.32
SDCBP-208ENST00000520228 TMCO3Q6UWJ1 677 aa6.78□□□□□ -1.32
SDCBP-208ENST00000520228 COLCA1Q6ZS62 124 aa6.78□□□□□ -1.32
SDCBP-208ENST00000520228 MOB3CQ70IA8 216 aa6.78□□□□□ -1.32
SDCBP-208ENST00000520228 RBFAQ8N0V3 343 aa6.78□□□□□ -1.32
SDCBP-208ENST00000520228 CADM3Q8N126 398 aa6.78□□□□□ -1.32
SDCBP-208ENST00000520228 NPWQ8N729 165 aa6.78□□□□□ -1.32
SDCBP-208ENST00000520228 PAF1Q8N7H5 531 aa6.78□□□□□ -1.32
SDCBP-208ENST00000520228 OR2AP1Q8NGE2 309 aa6.78□□□□□ -1.32
SDCBP-208ENST00000520228 OR2T34Q8NGX1 318 aa6.78□□□□□ -1.32
SDCBP-208ENST00000520228 GABPB2Q8TAK5 448 aaPredicted RBP6.78□□□□□ -1.32
SDCBP-208ENST00000520228 DNASE2BQ8WZ79 361 aa6.78□□□□□ -1.32
SDCBP-208ENST00000520228 TCEAL3Q969E4 200 aa6.78□□□□□ -1.32
SDCBP-208ENST00000520228 CALN1Q9BXU9 219 aa6.78□□□□□ -1.32
SDCBP-208ENST00000520228 TM6SF2Q9BZW4 377 aa6.78□□□□□ -1.32
SDCBP-208ENST00000520228 C6orf106Q9H6K1 298 aaPredicted RBP6.78□□□□□ -1.32
SDCBP-208ENST00000520228 MVB12BQ9H7P6 319 aa6.78□□□□□ -1.32
SDCBP-208ENST00000520228 DYRK4Q9NR20 520 aa6.78□□□□□ -1.32
SDCBP-208ENST00000520228 RCOR3Q9P2K3 495 aaPredicted RBP6.78□□□□□ -1.32
SDCBP-208ENST00000520228 UBA2Q9UBT2 640 aaPredicted RBP6.78□□□□□ -1.32
SDCBP-208ENST00000520228 HSPB7Q9UBY9 170 aa6.78□□□□□ -1.32
SDCBP-208ENST00000520228 IL36AQ9UHA7 158 aa6.78□□□□□ -1.32
SDCBP-208ENST00000520228 PCDHGB5Q9Y5G0 923 aa6.78□□□□□ -1.32
SDCBP-208ENST00000520228 DYNC1LI1Q9Y6G9 523 aaKnown RBP6.78□□□□□ -1.32
SDCBP-208ENST00000520228 MYOFQ9NZM1 2061 aa6.77□□□□□ -1.33
SDCBP-208ENST00000520228 PLK4O00444 970 aa6.77□□□□□ -1.33
SDCBP-208ENST00000520228 TSPAN4O14817 238 aa6.77□□□□□ -1.33
SDCBP-208ENST00000520228 SLC7A4O43246 635 aa6.77□□□□□ -1.33
SDCBP-208ENST00000520228 TNFSF14O43557 240 aa6.77□□□□□ -1.33
SDCBP-208ENST00000520228 SPOPO43791 374 aa6.77□□□□□ -1.33
SDCBP-208ENST00000520228 PALMO75781 387 aa6.77□□□□□ -1.33
SDCBP-208ENST00000520228 SERPINF2P08697 491 aa6.77□□□□□ -1.33
SDCBP-208ENST00000520228 CD48P09326 243 aa6.77□□□□□ -1.33
SDCBP-208ENST00000520228 CD27P26842 260 aa6.77□□□□□ -1.33
SDCBP-208ENST00000520228 SERPINB6P35237 376 aa6.77□□□□□ -1.33
SDCBP-208ENST00000520228 DRD3P35462 400 aa6.77□□□□□ -1.33
SDCBP-208ENST00000520228 ARSEP51690 589 aa6.77□□□□□ -1.33
SDCBP-208ENST00000520228 CASP6P55212 293 aa6.77□□□□□ -1.33
SDCBP-208ENST00000520228 RHOAP61586 193 aa6.77□□□□□ -1.33
SDCBP-208ENST00000520228 IRX4P78413 519 aa6.77□□□□□ -1.33
SDCBP-208ENST00000520228 RAD51Q06609 339 aa6.77□□□□□ -1.33
SDCBP-208ENST00000520228 IL10RBQ08334 325 aa6.77□□□□□ -1.33
SDCBP-208ENST00000520228 DPYSL3Q14195 570 aa6.77□□□□□ -1.33
SDCBP-208ENST00000520228 CYTH1Q15438 398 aa6.77□□□□□ -1.33
SDCBP-208ENST00000520228 PRTGQ2VWP7 1150 aa6.77□□□□□ -1.33
SDCBP-208ENST00000520228 ODF2Q5BJF6 829 aa6.77□□□□□ -1.33
SDCBP-208ENST00000520228 FAM69AQ5T7M9 428 aa6.77□□□□□ -1.33
SDCBP-208ENST00000520228 LRRC38Q5VT99 294 aa6.77□□□□□ -1.33
SDCBP-208ENST00000520228 TMEM81Q6P7N7 255 aa6.77□□□□□ -1.33
SDCBP-208ENST00000520228 RAD9BQ6WBX8 426 aa6.77□□□□□ -1.33
SDCBP-208ENST00000520228 PIM3Q86V86 326 aa6.77□□□□□ -1.33
SDCBP-208ENST00000520228 ARMC8Q8IUR7 673 aa6.77□□□□□ -1.33
SDCBP-208ENST00000520228 ARHGAP12Q8IWW6 846 aa6.77□□□□□ -1.33
SDCBP-208ENST00000520228 TEX45Q8NA69 505 aa6.77□□□□□ -1.33
SDCBP-208ENST00000520228 OR6K2Q8NGY2 324 aa6.77□□□□□ -1.33
SDCBP-208ENST00000520228 NFKBIDQ8NI38 313 aa6.77□□□□□ -1.33
SDCBP-208ENST00000520228 BIRC7Q96CA5 298 aa6.77□□□□□ -1.33
SDCBP-208ENST00000520228 URB1-AS1Q96HZ7 61 aa6.77□□□□□ -1.33
SDCBP-208ENST00000520228 PPP1R16AQ96I34 528 aa6.77□□□□□ -1.33
SDCBP-208ENST00000520228 MPP4Q96JB8 637 aa6.77□□□□□ -1.33
SDCBP-208ENST00000520228 GDAP1L1Q96MZ0 367 aa6.77□□□□□ -1.33
SDCBP-208ENST00000520228 ZNF670Q9BS34 389 aa6.77□□□□□ -1.33
SDCBP-208ENST00000520228 NUSAP1Q9BXS6 441 aaKnown RBP6.77□□□□□ -1.33
SDCBP-208ENST00000520228 ZDHHC6Q9H6R6 413 aa6.77□□□□□ -1.33
SDCBP-208ENST00000520228 PDFQ9HBH1 243 aa6.77□□□□□ -1.33
SDCBP-208ENST00000520228 ETNK2Q9NVF9 386 aa6.77□□□□□ -1.33
SDCBP-208ENST00000520228 KIAA1456Q9P272 454 aa6.77□□□□□ -1.33
SDCBP-208ENST00000520228 TFR2Q9UP52 801 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms