RNA–Protein interactions for RNA: ENST00000519481.5

PVT1-208, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 542 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-208ENST00000519481 AIF1LQ9BQI0 150 aa10.23□□□□□ -0.77
PVT1-208ENST00000519481 ZFP69BQ9UJL9 534 aa10.23□□□□□ -0.77
PVT1-208ENST00000519481 CPAMD8Q8IZJ3 1885 aa10.23□□□□□ -0.77
PVT1-208ENST00000519481 CHST10O43529 356 aa10.22□□□□□ -0.77
PVT1-208ENST00000519481 PRMT3O60678 531 aa10.22□□□□□ -0.77
PVT1-208ENST00000519481 B4GALT2O60909 372 aa10.22□□□□□ -0.77
PVT1-208ENST00000519481 BANF1O75531 89 aa10.22□□□□□ -0.77
PVT1-208ENST00000519481 ZNF888P0CJ79 500 aaPredicted RBP10.22□□□□□ -0.77
PVT1-208ENST00000519481 RNH1P13489 461 aaKnown RBP10.22□□□□□ -0.77
PVT1-208ENST00000519481 TCP1P17987 556 aaKnown RBP10.22□□□□□ -0.77
PVT1-208ENST00000519481 GABRB3P28472 473 aa10.22□□□□□ -0.77
PVT1-208ENST00000519481 AHRP35869 848 aa10.22□□□□□ -0.77
PVT1-208ENST00000519481 CD96P40200 585 aa10.22□□□□□ -0.77
PVT1-208ENST00000519481 SCTRP47872 440 aa10.22□□□□□ -0.77
PVT1-208ENST00000519481 SLC26A5P58743 744 aa10.22□□□□□ -0.77
PVT1-208ENST00000519481 MORF4L2Q15014 288 aa10.22□□□□□ -0.77
PVT1-208ENST00000519481 TEDDM1Q5T9Z0 273 aa10.22□□□□□ -0.77
PVT1-208ENST00000519481 SLC25A25Q6KCM7 469 aa10.22□□□□□ -0.77
PVT1-208ENST00000519481 BNC2Q6ZN30 1099 aaPredicted RBP10.22□□□□□ -0.77
PVT1-208ENST00000519481 SYDE1Q6ZW31 735 aaPredicted RBP10.22□□□□□ -0.77
PVT1-208ENST00000519481 RPS19BP1Q86WX3 136 aaKnown RBP10.22□□□□□ -0.77
PVT1-208ENST00000519481 MCEMP1Q8IX19 187 aa10.22□□□□□ -0.77
PVT1-208ENST00000519481 AFAP1L2Q8N4X5 818 aa10.22□□□□□ -0.77
PVT1-208ENST00000519481 MDS2Q8NDY4 140 aa10.22□□□□□ -0.77
PVT1-208ENST00000519481 OR5T3Q8NGG3 340 aa10.22□□□□□ -0.77
PVT1-208ENST00000519481 NT5CQ8TCD5 201 aa10.22□□□□□ -0.77
PVT1-208ENST00000519481 THAP3Q8WTV1 239 aaPredicted RBP10.22□□□□□ -0.77
PVT1-208ENST00000519481 TSLPQ969D9 159 aa10.22□□□□□ -0.77
PVT1-208ENST00000519481 TMEM125Q96AQ2 219 aa10.22□□□□□ -0.77
PVT1-208ENST00000519481 LRRC39Q96DD0 335 aa10.22□□□□□ -0.77
PVT1-208ENST00000519481 PDLIM5Q96HC4 596 aaKnown RBP10.22□□□□□ -0.77
PVT1-208ENST00000519481 RUNDC3BQ96NL0 473 aa10.22□□□□□ -0.77
PVT1-208ENST00000519481 PTCHD1Q96NR3 888 aa10.22□□□□□ -0.77
PVT1-208ENST00000519481 SIGLEC12Q96PQ1 595 aa10.22□□□□□ -0.77
PVT1-208ENST00000519481 DDX47Q9H0S4 455 aaKnown RBP10.22□□□□□ -0.77
PVT1-208ENST00000519481 CDCP1Q9H5V8 836 aa10.22□□□□□ -0.77
PVT1-208ENST00000519481 PELI2Q9HAT8 420 aa10.22□□□□□ -0.77
PVT1-208ENST00000519481 LANCL2Q9NS86 450 aa10.22□□□□□ -0.77
PVT1-208ENST00000519481 ANKRD10Q9NXR5 420 aa10.22□□□□□ -0.77
PVT1-208ENST00000519481 LRFN1Q9P244 771 aa10.22□□□□□ -0.77
PVT1-208ENST00000519481 SNX12Q9UMY4 172 aa10.22□□□□□ -0.77
PVT1-208ENST00000519481 KCNE2Q9Y6J6 123 aa10.22□□□□□ -0.77
PVT1-208ENST00000519481 ABCA12Q86UK0 2595 aa10.22□□□□□ -0.77
PVT1-208ENST00000519481 NPIPA5E9PKD4 350 aa10.21□□□□□ -0.77
PVT1-208ENST00000519481 FCHO1O14526 889 aa10.21□□□□□ -0.77
PVT1-208ENST00000519481 H2AFYO75367 372 aaKnown RBP10.21□□□□□ -0.77
PVT1-208ENST00000519481 TSPAN12O95859 305 aa10.21□□□□□ -0.77
PVT1-208ENST00000519481 SP1P08047 785 aa10.21□□□□□ -0.77
PVT1-208ENST00000519481 COX6B1P14854 86 aa10.21□□□□□ -0.77
PVT1-208ENST00000519481 SAT1P21673 171 aa10.21□□□□□ -0.77
PVT1-208ENST00000519481 HTR1EP28566 365 aa10.21□□□□□ -0.77
PVT1-208ENST00000519481 PTGER4P35408 488 aa10.21□□□□□ -0.77
PVT1-208ENST00000519481 ELK3P41970 407 aa10.21□□□□□ -0.77
PVT1-208ENST00000519481 ARL4CP56559 192 aa10.21□□□□□ -0.77
PVT1-208ENST00000519481 SRSF11Q05519 484 aaKnown RBP10.21□□□□□ -0.77
PVT1-208ENST00000519481 RBBP5Q15291 538 aaKnown RBP10.21□□□□□ -0.77
PVT1-208ENST00000519481 MAPKAPK3Q16644 382 aa10.21□□□□□ -0.77
PVT1-208ENST00000519481 MSS51Q4VC12 460 aa10.21□□□□□ -0.77
PVT1-208ENST00000519481 CATSPEREQ5SY80 951 aa10.21□□□□□ -0.77
PVT1-208ENST00000519481 SPINK14Q6IE38 97 aa10.21□□□□□ -0.77
PVT1-208ENST00000519481 QSOX2Q6ZRP7 698 aa10.21□□□□□ -0.77
PVT1-208ENST00000519481 GDF7Q7Z4P5 450 aa10.21□□□□□ -0.77
PVT1-208ENST00000519481 GALNTL5Q7Z4T8 443 aa10.21□□□□□ -0.77
PVT1-208ENST00000519481 TMPRSS11BQ86T26 416 aa10.21□□□□□ -0.77
PVT1-208ENST00000519481 EID3Q8N140 333 aa10.21□□□□□ -0.77
PVT1-208ENST00000519481 NKAPQ8N5F7 415 aaKnown RBP10.21□□□□□ -0.77
PVT1-208ENST00000519481 AMER2Q8N7J2 671 aa10.21□□□□□ -0.77
PVT1-208ENST00000519481 SLCO2A1Q92959 643 aa10.21□□□□□ -0.77
PVT1-208ENST00000519481 NEIL2Q969S2 332 aa10.21□□□□□ -0.77
PVT1-208ENST00000519481 SCMH1Q96GD3 660 aa10.21□□□□□ -0.77
PVT1-208ENST00000519481 VPS39Q96JC1 886 aa10.21□□□□□ -0.77
PVT1-208ENST00000519481 GPR137Q96N19 417 aa10.21□□□□□ -0.77
PVT1-208ENST00000519481 TSNARE1Q96NA8 513 aa10.21□□□□□ -0.77
PVT1-208ENST00000519481 OR4K3Q96R72 315 aa10.21□□□□□ -0.77
PVT1-208ENST00000519481 EGFL8Q99944 293 aa10.21□□□□□ -0.77
PVT1-208ENST00000519481 UNKQ9C0B0 810 aaKnown RBP10.21□□□□□ -0.77
PVT1-208ENST00000519481 GPAMQ9HCL2 828 aa10.21□□□□□ -0.77
PVT1-208ENST00000519481 ZFATQ9P243 1243 aa10.21□□□□□ -0.77
PVT1-208ENST00000519481 NPIPA1Q9UND3 350 aa10.21□□□□□ -0.77
PVT1-208ENST00000519481 CHMP2BQ9UQN3 213 aa10.21□□□□□ -0.77
PVT1-208ENST00000519481 LRBAP50851 2863 aa10.2□□□□□ -0.78
PVT1-208ENST00000519481 ASPDHA6ND91 283 aa10.2□□□□□ -0.78
PVT1-208ENST00000519481 SAGE2PA6NJ88 616 aa10.2□□□□□ -0.78
PVT1-208ENST00000519481 ABOP16442 354 aa10.2□□□□□ -0.78
PVT1-208ENST00000519481 AGAP20933 346 aa10.2□□□□□ -0.78
PVT1-208ENST00000519481 HPDP32754 393 aaPredicted RBP10.2□□□□□ -0.78
PVT1-208ENST00000519481 HNF4AP41235 474 aa10.2□□□□□ -0.78
PVT1-208ENST00000519481 CYB561P49447 251 aa10.2□□□□□ -0.78
PVT1-208ENST00000519481 HNMTP50135 292 aa10.2□□□□□ -0.78
PVT1-208ENST00000519481 RAB8AP61006 207 aa10.2□□□□□ -0.78
PVT1-208ENST00000519481 STXBP1P61764 594 aaKnown RBP10.2□□□□□ -0.78
PVT1-208ENST00000519481 OLR1P78380 273 aa10.2□□□□□ -0.78
PVT1-208ENST00000519481 REEP5Q00765 189 aa10.2□□□□□ -0.78
PVT1-208ENST00000519481 MGAT5Q09328 741 aa10.2□□□□□ -0.78
PVT1-208ENST00000519481 ILF2Q12905 390 aaKnown RBP10.2□□□□□ -0.78
PVT1-208ENST00000519481 C3AR1Q16581 482 aa10.2□□□□□ -0.78
PVT1-208ENST00000519481 ZNF630Q2M218 657 aaPredicted RBP10.2□□□□□ -0.78
PVT1-208ENST00000519481 HP1BP3Q5SSJ5 553 aaPredicted RBP10.2□□□□□ -0.78
PVT1-208ENST00000519481 NXPE4Q6UWF7 544 aa10.2□□□□□ -0.78
PVT1-208ENST00000519481 FRA10AC1Q70Z53 315 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms