RNA–Protein interactions for RNA: ENST00000516956.1

SCARNA16.4-201, small Cajal body-specific RNA 16, humanhuman

BASIC

Gene SCARNA16, Length 187 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA16.4-201ENST00000516956 MAD2L1Q13257 205 aaPredicted RBP5.19□□□□□ -1.58
SCARNA16.4-201ENST00000516956 CUL3Q13618 768 aa5.19□□□□□ -1.58
SCARNA16.4-201ENST00000516956 MPP2Q14168 576 aa5.19□□□□□ -1.58
SCARNA16.4-201ENST00000516956 SLC9A5Q14940 896 aa5.19□□□□□ -1.58
SCARNA16.4-201ENST00000516956 RTP5Q14D33 572 aa5.19□□□□□ -1.58
SCARNA16.4-201ENST00000516956 RPS6KA2Q15349 733 aa5.19□□□□□ -1.58
SCARNA16.4-201ENST00000516956 NR6A1Q15406 480 aa5.19□□□□□ -1.58
SCARNA16.4-201ENST00000516956 ZXDCQ2QGD7 858 aaPredicted RBP5.19□□□□□ -1.58
SCARNA16.4-201ENST00000516956 HKDC1Q2TB90 917 aa5.19□□□□□ -1.58
SCARNA16.4-201ENST00000516956 TUBB8Q3ZCM7 444 aa5.19□□□□□ -1.58
SCARNA16.4-201ENST00000516956 NKAIN1Q4KMZ8 207 aa5.19□□□□□ -1.58
SCARNA16.4-201ENST00000516956 DEFB134Q4QY38 66 aa5.19□□□□□ -1.58
SCARNA16.4-201ENST00000516956 SPIN4Q56A73 249 aa5.19□□□□□ -1.58
SCARNA16.4-201ENST00000516956 CCNYL2Q5T2Q4 361 aa5.19□□□□□ -1.58
SCARNA16.4-201ENST00000516956 DEPDC1Q5TB30 811 aa5.19□□□□□ -1.58
SCARNA16.4-201ENST00000516956 KHDRBS2Q5VWX1 349 aaKnown RBP5.19□□□□□ -1.58
SCARNA16.4-201ENST00000516956 ACSM2BQ68CK6 577 aa5.19□□□□□ -1.58
SCARNA16.4-201ENST00000516956 NXNQ6DKJ4 435 aa5.19□□□□□ -1.58
SCARNA16.4-201ENST00000516956 LETMD1Q6P1Q0 360 aa5.19□□□□□ -1.58
SCARNA16.4-201ENST00000516956 ACAD11Q709F0 780 aa5.19□□□□□ -1.58
SCARNA16.4-201ENST00000516956 NUDT13Q86X67 352 aa5.19□□□□□ -1.58
SCARNA16.4-201ENST00000516956 ZFAND4Q86XD8 727 aa5.19□□□□□ -1.58
SCARNA16.4-201ENST00000516956 LAS2Q8IYD9 372 aa5.19□□□□□ -1.58
SCARNA16.4-201ENST00000516956 CACNA2D3Q8IZS8 1091 aa5.19□□□□□ -1.58
SCARNA16.4-201ENST00000516956 DSELQ8IZU8 1212 aa5.19□□□□□ -1.58
SCARNA16.4-201ENST00000516956 METTL27Q8N6F8 245 aaPredicted RBP5.19□□□□□ -1.58
SCARNA16.4-201ENST00000516956 BMPERQ8N8U9 685 aa5.19□□□□□ -1.58
SCARNA16.4-201ENST00000516956 GALNT6Q8NCL4 622 aa5.19□□□□□ -1.58
SCARNA16.4-201ENST00000516956 ZNF248Q8NDW4 579 aa5.19□□□□□ -1.58
SCARNA16.4-201ENST00000516956 C7orf57Q8NEG2 295 aa5.19□□□□□ -1.58
SCARNA16.4-201ENST00000516956 OR2L5Q8NG80 312 aa5.19□□□□□ -1.58
SCARNA16.4-201ENST00000516956 HUS1BQ8NHY5 278 aa5.19□□□□□ -1.58
SCARNA16.4-201ENST00000516956 ADAMTS18Q8TE60 1221 aa5.19□□□□□ -1.58
SCARNA16.4-201ENST00000516956 AGAP11Q8TF27 550 aa5.19□□□□□ -1.58
SCARNA16.4-201ENST00000516956 ZNF473Q8WTR7 871 aaKnown RBP5.19□□□□□ -1.58
SCARNA16.4-201ENST00000516956 KCNE4Q8WWG9 221 aa5.19□□□□□ -1.58
SCARNA16.4-201ENST00000516956 METTL21AQ8WXB1 218 aa5.19□□□□□ -1.58
SCARNA16.4-201ENST00000516956 FGF11Q92914 225 aa5.19□□□□□ -1.58
SCARNA16.4-201ENST00000516956 MVB12AQ96EY5 273 aa5.19□□□□□ -1.58
SCARNA16.4-201ENST00000516956 PPP3R2Q96LZ3 170 aa5.19□□□□□ -1.58
SCARNA16.4-201ENST00000516956 MAGEB18Q96M61 343 aa5.19□□□□□ -1.58
SCARNA16.4-201ENST00000516956 F2RL3Q96RI0 385 aa5.19□□□□□ -1.58
SCARNA16.4-201ENST00000516956 MACROD1Q9BQ69 325 aa5.19□□□□□ -1.58
SCARNA16.4-201ENST00000516956 SARGQ9BW04 601 aa5.19□□□□□ -1.58
SCARNA16.4-201ENST00000516956 NSRP1Q9H0G5 558 aaKnown RBP5.19□□□□□ -1.58
SCARNA16.4-201ENST00000516956 OR51B5Q9H339 312 aa5.19□□□□□ -1.58
SCARNA16.4-201ENST00000516956 GPN2Q9H9Y4 310 aaPredicted RBP5.19□□□□□ -1.58
SCARNA16.4-201ENST00000516956 BRF2Q9HAW0 419 aa5.19□□□□□ -1.58
SCARNA16.4-201ENST00000516956 CLK4Q9HAZ1 481 aaKnown RBP5.19□□□□□ -1.58
SCARNA16.4-201ENST00000516956 ZBTB26Q9HCK0 441 aa5.19□□□□□ -1.58
SCARNA16.4-201ENST00000516956 DMRT3Q9NQL9 472 aa5.19□□□□□ -1.58
SCARNA16.4-201ENST00000516956 PSD3Q9NYI0 1048 aa5.19□□□□□ -1.58
SCARNA16.4-201ENST00000516956 DHCR7Q9UBM7 475 aaKnown RBP5.19□□□□□ -1.58
SCARNA16.4-201ENST00000516956 TRPC4Q9UBN4 977 aa5.19□□□□□ -1.58
SCARNA16.4-201ENST00000516956 VPS29Q9UBQ0 182 aa5.19□□□□□ -1.58
SCARNA16.4-201ENST00000516956 PHF11Q9UIL8 331 aa5.19□□□□□ -1.58
SCARNA16.4-201ENST00000516956 KCND3Q9UK17 655 aa5.19□□□□□ -1.58
SCARNA16.4-201ENST00000516956 PILRAQ9UKJ1 303 aa5.19□□□□□ -1.58
SCARNA16.4-201ENST00000516956 TIMM22Q9Y584 194 aa5.19□□□□□ -1.58
SCARNA16.4-201ENST00000516956 SLC22A7Q9Y694 548 aa5.19□□□□□ -1.58
SCARNA16.4-201ENST00000516956 GOLGA4Q13439 2230 aaKnown RBP5.18□□□□□ -1.58
SCARNA16.4-201ENST00000516956 A0A0A6YYC8 382 aaPredicted RBP5.18□□□□□ -1.58
SCARNA16.4-201ENST00000516956 FITM1A5D6W6 292 aa5.18□□□□□ -1.58
SCARNA16.4-201ENST00000516956 LRIT2A6NDA9 550 aa5.18□□□□□ -1.58
SCARNA16.4-201ENST00000516956 MAGEB17A8MXT2 336 aa5.18□□□□□ -1.58
SCARNA16.4-201ENST00000516956 TCP11X1B4DZS4 312 aa5.18□□□□□ -1.58
SCARNA16.4-201ENST00000516956 C9orf172C9J069 976 aa5.18□□□□□ -1.58
SCARNA16.4-201ENST00000516956 H0YIG0 161 aa5.18□□□□□ -1.58
SCARNA16.4-201ENST00000516956 I3L1I5 382 aaPredicted RBP5.18□□□□□ -1.58
SCARNA16.4-201ENST00000516956 PPP6CO00743 305 aa5.18□□□□□ -1.58
SCARNA16.4-201ENST00000516956 KLF11O14901 512 aa5.18□□□□□ -1.58
SCARNA16.4-201ENST00000516956 POLR3GO15318 223 aaPredicted RBP5.18□□□□□ -1.58
SCARNA16.4-201ENST00000516956 KLK10O43240 276 aa5.18□□□□□ -1.58
SCARNA16.4-201ENST00000516956 DYRK3O43781 588 aa5.18□□□□□ -1.58
SCARNA16.4-201ENST00000516956 SKAP2O75563 359 aaPredicted RBP5.18□□□□□ -1.58
SCARNA16.4-201ENST00000516956 LYPLA1O75608 230 aaPredicted RBP5.18□□□□□ -1.58
SCARNA16.4-201ENST00000516956 DXOO77932 396 aaKnown RBP5.18□□□□□ -1.58
SCARNA16.4-201ENST00000516956 KLHL18O94889 574 aa5.18□□□□□ -1.58
SCARNA16.4-201ENST00000516956 SEMA3DO95025 777 aa5.18□□□□□ -1.58
SCARNA16.4-201ENST00000516956 NSA2O95478 260 aaKnown RBP5.18□□□□□ -1.58
SCARNA16.4-201ENST00000516956 IGHEP01854 428 aa5.18□□□□□ -1.58
SCARNA16.4-201ENST00000516956 HEXBP07686 556 aa5.18□□□□□ -1.58
SCARNA16.4-201ENST00000516956 FGF4P08620 206 aa5.18□□□□□ -1.58
SCARNA16.4-201ENST00000516956 LINC00032P0C843 101 aa5.18□□□□□ -1.58
SCARNA16.4-201ENST00000516956 DHRS4L1P0CG22 281 aa5.18□□□□□ -1.58
SCARNA16.4-201ENST00000516956 LIPCP11150 499 aa5.18□□□□□ -1.58
SCARNA16.4-201ENST00000516956 RNH1P13489 461 aaKnown RBP5.18□□□□□ -1.58
SCARNA16.4-201ENST00000516956 IL1RNP18510 177 aa5.18□□□□□ -1.58
SCARNA16.4-201ENST00000516956 EPORP19235 508 aa5.18□□□□□ -1.58
SCARNA16.4-201ENST00000516956 IL10P22301 178 aa5.18□□□□□ -1.58
SCARNA16.4-201ENST00000516956 CPN2P22792 545 aa5.18□□□□□ -1.58
SCARNA16.4-201ENST00000516956 SERPINB3P29508 390 aa5.18□□□□□ -1.58
SCARNA16.4-201ENST00000516956 BUD31P41223 144 aaPredicted RBP5.18□□□□□ -1.58
SCARNA16.4-201ENST00000516956 FOLR3P41439 243 aa5.18□□□□□ -1.58
SCARNA16.4-201ENST00000516956 TSFMP43897 325 aaKnown RBP5.18□□□□□ -1.58
SCARNA16.4-201ENST00000516956 CCR10P46092 362 aa5.18□□□□□ -1.58
SCARNA16.4-201ENST00000516956 OR1D4P47884 311 aa5.18□□□□□ -1.58
SCARNA16.4-201ENST00000516956 ARFIP1P53367 373 aa5.18□□□□□ -1.58
SCARNA16.4-201ENST00000516956 MAPK12P53778 367 aa5.18□□□□□ -1.58
SCARNA16.4-201ENST00000516956 MC1RQ01726 317 aa5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms