RNA–Protein interactions for RNA: ENST00000514536.5

USP46-209, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2

Gene USP46, Length 1,589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-209ENST00000514536 TMEM109Q9BVC6 243 aa13.23□□□□□ -0.29
USP46-209ENST00000514536 AICDAQ9GZX7 198 aa13.23□□□□□ -0.29
USP46-209ENST00000514536 C12orf65Q9H3J6 166 aaKnown RBP13.23□□□□□ -0.29
USP46-209ENST00000514536 ACSS2Q9NR19 701 aa13.23□□□□□ -0.29
USP46-209ENST00000514536 LGALS13Q9UHV8 139 aa13.23□□□□□ -0.29
USP46-209ENST00000514536 NXT1Q9UKK6 140 aaKnown RBP13.23□□□□□ -0.29
USP46-209ENST00000514536 EMCNQ9ULC0 261 aa13.23□□□□□ -0.29
USP46-209ENST00000514536 GRID1Q9ULK0 1009 aa13.23□□□□□ -0.29
USP46-209ENST00000514536 MAP4K5Q9Y4K4 846 aa13.23□□□□□ -0.29
USP46-209ENST00000514536 FER1L5A0AVI2 2057 aa13.22□□□□□ -0.29
USP46-209ENST00000514536 URADA6NGE7 173 aa13.22□□□□□ -0.29
USP46-209ENST00000514536 ZNF860A6NHJ4 632 aa13.22□□□□□ -0.29
USP46-209ENST00000514536 ERVH48-1M5A8F1 160 aa13.22□□□□□ -0.29
USP46-209ENST00000514536 OR7A17O14581 309 aa13.22□□□□□ -0.29
USP46-209ENST00000514536 DNAJB6O75190 326 aa13.22□□□□□ -0.29
USP46-209ENST00000514536 CLEC3AO75596 197 aa13.22□□□□□ -0.29
USP46-209ENST00000514536 PCNAP12004 261 aa13.22□□□□□ -0.29
USP46-209ENST00000514536 ATP5F1P24539 256 aaPredicted RBP13.22□□□□□ -0.29
USP46-209ENST00000514536 GSTM2P28161 218 aa13.22□□□□□ -0.29
USP46-209ENST00000514536 ARL1P40616 181 aaPredicted RBP13.22□□□□□ -0.29
USP46-209ENST00000514536 CDH13P55290 713 aa13.22□□□□□ -0.29
USP46-209ENST00000514536 KLC1Q07866 573 aa13.22□□□□□ -0.29
USP46-209ENST00000514536 LIPJQ5W064 366 aa13.22□□□□□ -0.29
USP46-209ENST00000514536 GRHL2Q6ISB3 625 aa13.22□□□□□ -0.29
USP46-209ENST00000514536 ABHD13Q7L211 337 aa13.22□□□□□ -0.29
USP46-209ENST00000514536 TRABD2AQ86V40 505 aa13.22□□□□□ -0.29
USP46-209ENST00000514536 LAPTM4BQ86VI4 370 aa13.22□□□□□ -0.29
USP46-209ENST00000514536 RAB43Q86YS6 212 aa13.22□□□□□ -0.29
USP46-209ENST00000514536 OR51Q1Q8NH59 317 aa13.22□□□□□ -0.29
USP46-209ENST00000514536 SEC16BQ96JE7 1060 aa13.22□□□□□ -0.29
USP46-209ENST00000514536 CDK15Q96Q40 435 aa13.22□□□□□ -0.29
USP46-209ENST00000514536 UBL7Q96S82 380 aaPredicted RBP13.22□□□□□ -0.29
USP46-209ENST00000514536 RHBGQ9H310 441 aa13.22□□□□□ -0.29
USP46-209ENST00000514536 ZBTB26Q9HCK0 441 aa13.22□□□□□ -0.29
USP46-209ENST00000514536 MKKSQ9NPJ1 570 aaPredicted RBP13.22□□□□□ -0.29
USP46-209ENST00000514536 SEMA4BQ9NPR2 832 aaPredicted RBP13.22□□□□□ -0.29
USP46-209ENST00000514536 HCN3Q9P1Z3 774 aa13.22□□□□□ -0.29
USP46-209ENST00000514536 MAN2B2Q9Y2E5 1009 aa13.22□□□□□ -0.29
USP46-209ENST00000514536 RNF11Q9Y3C5 154 aa13.22□□□□□ -0.29
USP46-209ENST00000514536 IGLV3-12A0A075B6K2 115 aa13.21□□□□□ -0.29
USP46-209ENST00000514536 LRIT2A6NDA9 550 aa13.21□□□□□ -0.29
USP46-209ENST00000514536 UGDHO60701 494 aa13.21□□□□□ -0.29
USP46-209ENST00000514536 GALR3O60755 368 aaPredicted RBP13.21□□□□□ -0.29
USP46-209ENST00000514536 RDH16O75452 317 aa13.21□□□□□ -0.29
USP46-209ENST00000514536 ERLIN1O75477 346 aa13.21□□□□□ -0.29
USP46-209ENST00000514536 PROCP04070 461 aa13.21□□□□□ -0.29
USP46-209ENST00000514536 RPS17P08708 135 aaKnown RBP13.21□□□□□ -0.29
USP46-209ENST00000514536 SMIM10L1P0DMW3 83 aa13.21□□□□□ -0.29
USP46-209ENST00000514536 HNRNPH1P31943 449 aaKnown RBP13.21□□□□□ -0.29
USP46-209ENST00000514536 CCR10P46092 362 aa13.21□□□□□ -0.29
USP46-209ENST00000514536 CCNG1P51959 295 aa13.21□□□□□ -0.29
USP46-209ENST00000514536 STXBP1P61764 594 aaKnown RBP13.21□□□□□ -0.29
USP46-209ENST00000514536 HERVK_113P63132 956 aa13.21□□□□□ -0.29
USP46-209ENST00000514536 ZNF844Q08AG5 666 aa13.21□□□□□ -0.29
USP46-209ENST00000514536 CPSF6Q16630 551 aaKnown RBP eCLIP13.21□□□□□ -0.29
USP46-209ENST00000514536 KRT71Q3SY84 523 aa13.21□□□□□ -0.29
USP46-209ENST00000514536 UNC50Q53HI1 259 aa13.21□□□□□ -0.29
USP46-209ENST00000514536 SRRM1Q8IYB3 904 aaKnown RBP13.21□□□□□ -0.29
USP46-209ENST00000514536 LAS2Q8IYD9 372 aa13.21□□□□□ -0.29
USP46-209ENST00000514536 IQCKQ8N0W5 287 aa13.21□□□□□ -0.29
USP46-209ENST00000514536 OR7G3Q8NG95 312 aa13.21□□□□□ -0.29
USP46-209ENST00000514536 OR52B6Q8NGF0 335 aa13.21□□□□□ -0.29
USP46-209ENST00000514536 OR5T3Q8NGG3 340 aa13.21□□□□□ -0.29
USP46-209ENST00000514536 PPP4R1Q8TF05 950 aa13.21□□□□□ -0.29
USP46-209ENST00000514536 ZNF483Q8TF39 744 aaPredicted RBP13.21□□□□□ -0.29
USP46-209ENST00000514536 ZNF473Q8WTR7 871 aaKnown RBP13.21□□□□□ -0.29
USP46-209ENST00000514536 APOBEC4Q8WW27 367 aaKnown RBP13.21□□□□□ -0.29
USP46-209ENST00000514536 ZBTB9Q96C00 473 aa13.21□□□□□ -0.29
USP46-209ENST00000514536 MS4A6EQ96DS6 147 aa13.21□□□□□ -0.29
USP46-209ENST00000514536 SMIM10Q96HG1 83 aa13.21□□□□□ -0.29
USP46-209ENST00000514536 ERVK-6Q9BXR3 956 aa13.21□□□□□ -0.29
USP46-209ENST00000514536 KCNMB2Q9Y691 235 aa13.21□□□□□ -0.29
USP46-209ENST00000514536 A0A0G2JN53 185 aa13.2□□□□□ -0.3
USP46-209ENST00000514536 C4orf51C9J302 202 aa13.2□□□□□ -0.3
USP46-209ENST00000514536 G3V2L1 256 aa13.2□□□□□ -0.3
USP46-209ENST00000514536 PPP6CO00743 305 aa13.2□□□□□ -0.3
USP46-209ENST00000514536 ERI3O43414 337 aaKnown RBP13.2□□□□□ -0.3
USP46-209ENST00000514536 PLIN3O60664 434 aa13.2□□□□□ -0.3
USP46-209ENST00000514536 SH3BGRLO75368 114 aa13.2□□□□□ -0.3
USP46-209ENST00000514536 JRKO75564 520 aa13.2□□□□□ -0.3
USP46-209ENST00000514536 SUPT7LO94864 414 aa13.2□□□□□ -0.3
USP46-209ENST00000514536 CLDN9O95484 217 aa13.2□□□□□ -0.3
USP46-209ENST00000514536 TBX6O95947 436 aaPredicted RBP13.2□□□□□ -0.3
USP46-209ENST00000514536 MYL2P10916 166 aa13.2□□□□□ -0.3
USP46-209ENST00000514536 TSPAN8P19075 237 aa13.2□□□□□ -0.3
USP46-209ENST00000514536 IMPDH1P20839 514 aa13.2□□□□□ -0.3
USP46-209ENST00000514536 PLA2G16P53816 162 aa13.2□□□□□ -0.3
USP46-209ENST00000514536 PRKAA2P54646 552 aa13.2□□□□□ -0.3
USP46-209ENST00000514536 EMP2P54851 167 aa13.2□□□□□ -0.3
USP46-209ENST00000514536 OLR1P78380 273 aa13.2□□□□□ -0.3
USP46-209ENST00000514536 BTN3A2P78410 334 aa13.2□□□□□ -0.3
USP46-209ENST00000514536 ATP1A4Q13733 1029 aa13.2□□□□□ -0.3
USP46-209ENST00000514536 DDX39BQ13838 428 aaKnown RBP13.2□□□□□ -0.3
USP46-209ENST00000514536 RBBP7Q16576 425 aa13.2□□□□□ -0.3
USP46-209ENST00000514536 CCDC153Q494R4 210 aa13.2□□□□□ -0.3
USP46-209ENST00000514536 ZNF678Q5SXM1 525 aa13.2□□□□□ -0.3
USP46-209ENST00000514536 PCSK4Q6UW60 755 aa13.2□□□□□ -0.3
USP46-209ENST00000514536 PPP1R32Q7Z5V6 425 aa13.2□□□□□ -0.3
USP46-209ENST00000514536 MILR1Q7Z6M3 343 aa13.2□□□□□ -0.3
USP46-209ENST00000514536 SLC22A9Q8IVM8 553 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms