RNA–Protein interactions for RNA: ENST00000514267.1

CALCOCO2-223, Transcript of calcium binding and coiled-coil domain 2, human

TSL 2

Gene CALCOCO2, Length 336 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CALCOCO2-223	ENST00000514267	KCTD8	Q6ZWB6	473 aa		3.11	□□□□□ -1.91
CALCOCO2-223	ENST00000514267	ASPG	Q86U10	573 aa		3.11	□□□□□ -1.91
CALCOCO2-223	ENST00000514267	LAX1	Q8IWV1	398 aa		3.11	□□□□□ -1.91
CALCOCO2-223	ENST00000514267	RCOR2	Q8IZ40	523 aa		3.11	□□□□□ -1.91
CALCOCO2-223	ENST00000514267	ELMOD2	Q8IZ81	293 aa		3.11	□□□□□ -1.91
CALCOCO2-223	ENST00000514267	ZNF444	Q8N0Y2	327 aa	Predicted RBP	3.11	□□□□□ -1.91
CALCOCO2-223	ENST00000514267	MAPKAPK5-AS1	Q8N8E1	139 aa		3.11	□□□□□ -1.91
CALCOCO2-223	ENST00000514267	SIDT2	Q8NBJ9	832 aa	Known RBP	3.11	□□□□□ -1.91
CALCOCO2-223	ENST00000514267	SECTM1	Q8WVN6	248 aa		3.11	□□□□□ -1.91
CALCOCO2-223	ENST00000514267	DTD2	Q96FN9	168 aa		3.11	□□□□□ -1.91
CALCOCO2-223	ENST00000514267	NSL1	Q96IY1	281 aa		3.11	□□□□□ -1.91
CALCOCO2-223	ENST00000514267	C16orf45	Q96MC5	204 aa	Predicted RBP	3.11	□□□□□ -1.91
CALCOCO2-223	ENST00000514267	UHRF2	Q96PU4	802 aa		3.11	□□□□□ -1.91
CALCOCO2-223	ENST00000514267	NDN	Q99608	321 aa		3.11	□□□□□ -1.91
CALCOCO2-223	ENST00000514267	CDCA3	Q99618	268 aa	Predicted RBP	3.11	□□□□□ -1.91
CALCOCO2-223	ENST00000514267	DDX50	Q9BQ39	737 aa	Known RBP	3.11	□□□□□ -1.91
CALCOCO2-223	ENST00000514267	PITPNM3	Q9BZ71	974 aa		3.11	□□□□□ -1.91
CALCOCO2-223	ENST00000514267	ACPT	Q9BZG2	426 aa		3.11	□□□□□ -1.91
CALCOCO2-223	ENST00000514267	RIMS4	Q9H426	269 aa	Predicted RBP	3.11	□□□□□ -1.91
CALCOCO2-223	ENST00000514267	PPAN	Q9NQ55	473 aa	Known RBP	3.11	□□□□□ -1.91
CALCOCO2-223	ENST00000514267	POLE3	Q9NRF9	147 aa		3.11	□□□□□ -1.91
CALCOCO2-223	ENST00000514267	PHPT1	Q9NRX4	125 aa	Predicted RBP	3.11	□□□□□ -1.91
CALCOCO2-223	ENST00000514267	FAM207A	Q9NSI2	230 aa	Predicted RBP	3.11	□□□□□ -1.91
CALCOCO2-223	ENST00000514267	ZCCHC3	Q9NUD5	404 aa	Known RBP	3.11	□□□□□ -1.91
CALCOCO2-223	ENST00000514267	EXOC1	Q9NV70	894 aa		3.11	□□□□□ -1.91
CALCOCO2-223	ENST00000514267	MALT1	Q9UDY8	824 aa		3.11	□□□□□ -1.91
CALCOCO2-223	ENST00000514267	IL36A	Q9UHA7	158 aa		3.11	□□□□□ -1.91
CALCOCO2-223	ENST00000514267	SLC12A6	Q9UHW9	1150 aa		3.11	□□□□□ -1.91
CALCOCO2-223	ENST00000514267	TMCC3	Q9ULS5	477 aa		3.11	□□□□□ -1.91
CALCOCO2-223	ENST00000514267	ABCA8	O94911	1581 aa		3.11	□□□□□ -1.91
CALCOCO2-223	ENST00000514267	TAF1	P21675	1872 aa		3.11	□□□□□ -1.91
CALCOCO2-223	ENST00000514267	CCDC7	Q96M83	1385 aa		3.11	□□□□□ -1.91
CALCOCO2-223	ENST00000514267	KIF15	Q9NS87	1388 aa		3.11	□□□□□ -1.91
CALCOCO2-223	ENST00000514267	CNTLN	Q9NXG0	1405 aa		3.1	□□□□□ -1.91
CALCOCO2-223	ENST00000514267	CHD1	O14646	1710 aa		3.1	□□□□□ -1.91
CALCOCO2-223	ENST00000514267	FAM172BP	A6NC97	362 aa		3.1	□□□□□ -1.91
CALCOCO2-223	ENST00000514267	CFAP73	A6NFT4	308 aa		3.1	□□□□□ -1.91
CALCOCO2-223	ENST00000514267	ARHGAP42	A6NI28	874 aa		3.1	□□□□□ -1.91
CALCOCO2-223	ENST00000514267	ATP6V0E1	O15342	81 aa		3.1	□□□□□ -1.91
CALCOCO2-223	ENST00000514267	MAGEB2	O15479	319 aa		3.1	□□□□□ -1.91
CALCOCO2-223	ENST00000514267	PRKN	O60260	465 aa	Predicted RBP	3.1	□□□□□ -1.91
CALCOCO2-223	ENST00000514267	CLN5	O75503	358 aa		3.1	□□□□□ -1.91
CALCOCO2-223	ENST00000514267	CXCL14	O95715	111 aa		3.1	□□□□□ -1.91
CALCOCO2-223	ENST00000514267	BAG3	O95817	575 aa		3.1	□□□□□ -1.91
CALCOCO2-223	ENST00000514267	GAS8	O95995	478 aa		3.1	□□□□□ -1.91
CALCOCO2-223	ENST00000514267	MT-ATP6	P00846	226 aa		3.1	□□□□□ -1.91
CALCOCO2-223	ENST00000514267	CXCL10	P02778	98 aa		3.1	□□□□□ -1.91
CALCOCO2-223	ENST00000514267	DLAT	P10515	647 aa	Known RBP	3.1	□□□□□ -1.91
CALCOCO2-223	ENST00000514267	F3	P13726	295 aa		3.1	□□□□□ -1.91
CALCOCO2-223	ENST00000514267	CPA3	P15088	417 aa		3.1	□□□□□ -1.91
CALCOCO2-223	ENST00000514267	CYP3A5	P20815	502 aa		3.1	□□□□□ -1.91
CALCOCO2-223	ENST00000514267	ALDH4A1	P30038	563 aa		3.1	□□□□□ -1.91
CALCOCO2-223	ENST00000514267	CCND2	P30279	289 aa		3.1	□□□□□ -1.91
CALCOCO2-223	ENST00000514267	SFN	P31947	248 aa		3.1	□□□□□ -1.91
CALCOCO2-223	ENST00000514267	NKX2-1	P43699	371 aa	Predicted RBP	3.1	□□□□□ -1.91
CALCOCO2-223	ENST00000514267	RABIF	P47224	123 aa		3.1	□□□□□ -1.91
CALCOCO2-223	ENST00000514267	SMS	P52788	366 aa		3.1	□□□□□ -1.91
CALCOCO2-223	ENST00000514267	CLDN17	P56750	224 aa		3.1	□□□□□ -1.91
CALCOCO2-223	ENST00000514267	B3GALT5-AS1	P59052	145 aa		3.1	□□□□□ -1.91
CALCOCO2-223	ENST00000514267	GMFB	P60983	142 aa		3.1	□□□□□ -1.91
CALCOCO2-223	ENST00000514267	PPP1R8	Q12972	351 aa	Known RBP	3.1	□□□□□ -1.91
CALCOCO2-223	ENST00000514267	ABR	Q12979	859 aa		3.1	□□□□□ -1.91
CALCOCO2-223	ENST00000514267	CCDC40	Q4G0X9	1142 aa		3.1	□□□□□ -1.91
CALCOCO2-223	ENST00000514267	STXBP5	Q5T5C0	1151 aa		3.1	□□□□□ -1.91
CALCOCO2-223	ENST00000514267	DLEU7	Q6UYE1	221 aa		3.1	□□□□□ -1.91
CALCOCO2-223	ENST00000514267	ZNF852	Q6ZMS4	543 aa		3.1	□□□□□ -1.91
CALCOCO2-223	ENST00000514267	MARK2	Q7KZI7	788 aa	Known RBP	3.1	□□□□□ -1.91
CALCOCO2-223	ENST00000514267	G2E3	Q7L622	706 aa		3.1	□□□□□ -1.91
CALCOCO2-223	ENST00000514267	SLC16A9	Q7RTY1	509 aa		3.1	□□□□□ -1.91
CALCOCO2-223	ENST00000514267	RTN4RL2	Q86UN3	420 aa		3.1	□□□□□ -1.91
CALCOCO2-223	ENST00000514267	DCUN1D3	Q8IWE4	304 aa		3.1	□□□□□ -1.91
CALCOCO2-223	ENST00000514267	EID3	Q8N140	333 aa		3.1	□□□□□ -1.91
CALCOCO2-223	ENST00000514267	POC1A	Q8NBT0	407 aa		3.1	□□□□□ -1.91
CALCOCO2-223	ENST00000514267	NEK11	Q8NG66	645 aa		3.1	□□□□□ -1.91
CALCOCO2-223	ENST00000514267	OR52E1	Q8NGJ3	308 aa		3.1	□□□□□ -1.91
CALCOCO2-223	ENST00000514267	U2AF1L4	Q8WU68	220 aa	Known RBP	3.1	□□□□□ -1.91
CALCOCO2-223	ENST00000514267	SORCS1	Q8WY21	1168 aa		3.1	□□□□□ -1.91
CALCOCO2-223	ENST00000514267	GGH	Q92820	318 aa		3.1	□□□□□ -1.91
CALCOCO2-223	ENST00000514267	WBP2	Q969T9	261 aa		3.1	□□□□□ -1.91
CALCOCO2-223	ENST00000514267	ULK4	Q96C45	1275 aa		3.1	□□□□□ -1.91
CALCOCO2-223	ENST00000514267	ALG14	Q96F25	216 aa		3.1	□□□□□ -1.91
CALCOCO2-223	ENST00000514267	PKNOX2	Q96KN3	472 aa		3.1	□□□□□ -1.91
CALCOCO2-223	ENST00000514267	NSMCE2	Q96MF7	247 aa		3.1	□□□□□ -1.91
CALCOCO2-223	ENST00000514267	BTBD9	Q96Q07	612 aa		3.1	□□□□□ -1.91
CALCOCO2-223	ENST00000514267	ALKBH7	Q9BT30	221 aa	Predicted RBP	3.1	□□□□□ -1.91
CALCOCO2-223	ENST00000514267	SLC39A8	Q9C0K1	460 aa		3.1	□□□□□ -1.91
CALCOCO2-223	ENST00000514267	OR2B2	Q9GZK3	357 aa		3.1	□□□□□ -1.91
CALCOCO2-223	ENST00000514267	WWTR1	Q9GZV5	400 aa		3.1	□□□□□ -1.91
CALCOCO2-223	ENST00000514267	DDX47	Q9H0S4	455 aa	Known RBP	3.1	□□□□□ -1.91
CALCOCO2-223	ENST00000514267	ATG10	Q9H0Y0	220 aa		3.1	□□□□□ -1.91
CALCOCO2-223	ENST00000514267	ABCG4	Q9H172	646 aa		3.1	□□□□□ -1.91
CALCOCO2-223	ENST00000514267	EVA1A	Q9H8M9	152 aa		3.1	□□□□□ -1.91
CALCOCO2-223	ENST00000514267	RNF121	Q9H920	327 aa		3.1	□□□□□ -1.91
CALCOCO2-223	ENST00000514267	PELI2	Q9HAT8	420 aa		3.1	□□□□□ -1.91
CALCOCO2-223	ENST00000514267	RAVER2	Q9HCJ3	691 aa	Known RBP	3.1	□□□□□ -1.91
CALCOCO2-223	ENST00000514267	KCNMB3	Q9NPA1	279 aa		3.1	□□□□□ -1.91
CALCOCO2-223	ENST00000514267	ECHDC1	Q9NTX5	307 aa		3.1	□□□□□ -1.91
CALCOCO2-223	ENST00000514267	BLOC1S6	Q9UL45	172 aa		3.1	□□□□□ -1.91
CALCOCO2-223	ENST00000514267	DNPEP	Q9ULA0	475 aa		3.1	□□□□□ -1.91
CALCOCO2-223	ENST00000514267	KIF7	Q2M1P5	1343 aa		3.1	□□□□□ -1.91

Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms