RNA–Protein interactions for RNA: ENST00000514093.5

SQSTM1-215, Transcript of sequestosome 1, humanhuman

TSL 5

Gene SQSTM1, Length 842 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-215ENST00000514093 PNPLA3Q9NST1 481 aa18.99■□□□□ 0.63
SQSTM1-215ENST00000514093 ZNF148Q9UQR1 794 aa18.99■□□□□ 0.63
SQSTM1-215ENST00000514093 FCHO1O14526 889 aa18.98■□□□□ 0.63
SQSTM1-215ENST00000514093 PROM1O43490 865 aa18.98■□□□□ 0.63
SQSTM1-215ENST00000514093 LIASO43766 372 aa18.98■□□□□ 0.63
SQSTM1-215ENST00000514093 IL10P22301 178 aa18.98■□□□□ 0.63
SQSTM1-215ENST00000514093 CLCN7P51798 805 aa18.98■□□□□ 0.63
SQSTM1-215ENST00000514093 BTG2P78543 158 aa18.98■□□□□ 0.63
SQSTM1-215ENST00000514093 LTBQ06643 244 aa18.98■□□□□ 0.63
SQSTM1-215ENST00000514093 SNX1Q13596 522 aa18.98■□□□□ 0.63
SQSTM1-215ENST00000514093 RNF187Q5TA31 235 aaPredicted RBP18.98■□□□□ 0.63
SQSTM1-215ENST00000514093 CAPN13Q6MZZ7 669 aaPredicted RBP18.98■□□□□ 0.63
SQSTM1-215ENST00000514093 LIX1LQ8IVB5 337 aa18.98■□□□□ 0.63
SQSTM1-215ENST00000514093 CYP4Z2PQ8N1L4 340 aa18.98■□□□□ 0.63
SQSTM1-215ENST00000514093 PRELID2Q8N945 189 aa18.98■□□□□ 0.63
SQSTM1-215ENST00000514093 FBXO15Q8NCQ5 510 aaPredicted RBP18.98■□□□□ 0.63
SQSTM1-215ENST00000514093 GIMAP7Q8NHV1 300 aa18.98■□□□□ 0.63
SQSTM1-215ENST00000514093 C1orf54Q8WWF1 131 aa18.98■□□□□ 0.63
SQSTM1-215ENST00000514093 THAP11Q96EK4 314 aa18.98■□□□□ 0.63
SQSTM1-215ENST00000514093 SLC24A3Q9HC58 644 aa18.98■□□□□ 0.63
SQSTM1-215ENST00000514093 CCDC177Q9NQR7 707 aaPredicted RBP18.98■□□□□ 0.63
SQSTM1-215ENST00000514093 SLC16A5O15375 505 aa18.97■□□□□ 0.63
SQSTM1-215ENST00000514093 CHST10O43529 356 aa18.97■□□□□ 0.63
SQSTM1-215ENST00000514093 FTCDO95954 541 aa18.97■□□□□ 0.63
SQSTM1-215ENST00000514093 DNASE1P24855 282 aa18.97■□□□□ 0.63
SQSTM1-215ENST00000514093 HRH2P25021 359 aa18.97■□□□□ 0.63
SQSTM1-215ENST00000514093 MGAT1P26572 445 aa18.97■□□□□ 0.63
SQSTM1-215ENST00000514093 TBPL1P62380 186 aa18.97■□□□□ 0.63
SQSTM1-215ENST00000514093 ADAM8P78325 824 aa18.97■□□□□ 0.63
SQSTM1-215ENST00000514093 HYAL2Q12891 473 aa18.97■□□□□ 0.63
SQSTM1-215ENST00000514093 ZNF585AQ6P3V2 769 aa18.97■□□□□ 0.63
SQSTM1-215ENST00000514093 CENPUQ71F23 418 aa18.97■□□□□ 0.63
SQSTM1-215ENST00000514093 TMEM156Q8N614 296 aa18.97■□□□□ 0.63
SQSTM1-215ENST00000514093 NFAM1Q8NET5 270 aaPredicted RBP18.97■□□□□ 0.63
SQSTM1-215ENST00000514093 ALKBH8Q96BT7 664 aaKnown RBP18.97■□□□□ 0.63
SQSTM1-215ENST00000514093 IL22Q9GZX6 179 aa18.97■□□□□ 0.63
SQSTM1-215ENST00000514093 CLEC4MQ9H2X3 399 aaPredicted RBP18.97■□□□□ 0.63
SQSTM1-215ENST00000514093 SYBUQ9NX95 663 aa18.97■□□□□ 0.63
SQSTM1-215ENST00000514093 REXO2Q9Y3B8 237 aaKnown RBP18.97■□□□□ 0.63
SQSTM1-215ENST00000514093 SLC22A7Q9Y694 548 aa18.97■□□□□ 0.63
SQSTM1-215ENST00000514093 EPN1Q9Y6I3 576 aaPredicted RBP18.97■□□□□ 0.63
SQSTM1-215ENST00000514093 FLNAP21333 2647 aaKnown RBP18.97■□□□□ 0.63
SQSTM1-215ENST00000514093 PHF3Q92576 2039 aaKnown RBP18.96■□□□□ 0.63
SQSTM1-215ENST00000514093 PINLYPA6NC86 204 aa18.96■□□□□ 0.63
SQSTM1-215ENST00000514093 SAGE2PA6NJ88 616 aa18.96■□□□□ 0.63
SQSTM1-215ENST00000514093 FAM166BA8MTA8 275 aa18.96■□□□□ 0.63
SQSTM1-215ENST00000514093 GFYI3L273 518 aa18.96■□□□□ 0.63
SQSTM1-215ENST00000514093 ZBTB14O43829 449 aa18.96■□□□□ 0.63
SQSTM1-215ENST00000514093 FOSL1P15407 271 aa18.96■□□□□ 0.63
SQSTM1-215ENST00000514093 MAOAP21397 527 aa18.96■□□□□ 0.63
SQSTM1-215ENST00000514093 SKIV2L2P42285 1042 aaKnown RBP18.96■□□□□ 0.63
SQSTM1-215ENST00000514093 ADARP55265 1226 aaKnown RBP18.96■□□□□ 0.63
SQSTM1-215ENST00000514093 RPS6KA1Q15418 735 aa18.96■□□□□ 0.63
SQSTM1-215ENST00000514093 DEFB134Q4QY38 66 aa18.96■□□□□ 0.63
SQSTM1-215ENST00000514093 ARSKQ6UWY0 536 aa18.96■□□□□ 0.63
SQSTM1-215ENST00000514093 CYHR1Q6ZMK1 362 aa18.96■□□□□ 0.63
SQSTM1-215ENST00000514093 ZNF740Q8NDX6 193 aa18.96■□□□□ 0.63
SQSTM1-215ENST00000514093 TCF12Q99081 682 aa18.96■□□□□ 0.63
SQSTM1-215ENST00000514093 SLC6A16Q9GZN6 736 aa18.96■□□□□ 0.63
SQSTM1-215ENST00000514093 DEPPQ9NTK1 212 aa18.96■□□□□ 0.63
SQSTM1-215ENST00000514093 BFARQ9NZS9 450 aa18.96■□□□□ 0.63
SQSTM1-215ENST00000514093 KCMF1Q9P0J7 381 aa18.96■□□□□ 0.63
SQSTM1-215ENST00000514093 ZNF407Q9C0G0 2248 aa18.96■□□□□ 0.63
SQSTM1-215ENST00000514093 A0A0G2JNJ9 132 aa18.95■□□□□ 0.62
SQSTM1-215ENST00000514093 PFDN6O15212 129 aa18.95■□□□□ 0.62
SQSTM1-215ENST00000514093 GALR3O60755 368 aaPredicted RBP18.95■□□□□ 0.62
SQSTM1-215ENST00000514093 SLC35G6P0C7Q6 338 aa18.95■□□□□ 0.62
SQSTM1-215ENST00000514093 RPL22P35268 128 aaKnown RBP18.95■□□□□ 0.62
SQSTM1-215ENST00000514093 NPY2RP49146 381 aa18.95■□□□□ 0.62
SQSTM1-215ENST00000514093 DGKQP52824 942 aa18.95■□□□□ 0.62
SQSTM1-215ENST00000514093 PPIAP62937 165 aaKnown RBP18.95■□□□□ 0.62
SQSTM1-215ENST00000514093 HERC3Q15034 1050 aa18.95■□□□□ 0.62
SQSTM1-215ENST00000514093 KCTD19Q17RG1 926 aaPredicted RBP18.95■□□□□ 0.62
SQSTM1-215ENST00000514093 TTLL9Q3SXZ7 439 aa18.95■□□□□ 0.62
SQSTM1-215ENST00000514093 UBE2R2Q712K3 238 aaPredicted RBP18.95■□□□□ 0.62
SQSTM1-215ENST00000514093 AFAP1L2Q8N4X5 818 aa18.95■□□□□ 0.62
SQSTM1-215ENST00000514093 CCDC89Q8N998 374 aa18.95■□□□□ 0.62
SQSTM1-215ENST00000514093 MFSD9Q8NBP5 474 aa18.95■□□□□ 0.62
SQSTM1-215ENST00000514093 RMND5BQ96G75 393 aaPredicted RBP18.95■□□□□ 0.62
SQSTM1-215ENST00000514093 PANX2Q96RD6 677 aa18.95■□□□□ 0.62
SQSTM1-215ENST00000514093 TTYH2Q9BSA4 534 aa18.95■□□□□ 0.62
SQSTM1-215ENST00000514093 KIFC1Q9BW19 673 aa18.95■□□□□ 0.62
SQSTM1-215ENST00000514093 ATG10Q9H0Y0 220 aa18.95■□□□□ 0.62
SQSTM1-215ENST00000514093 PAK5Q9P286 719 aa18.95■□□□□ 0.62
SQSTM1-215ENST00000514093 Q9UFV3 132 aa18.95■□□□□ 0.62
SQSTM1-215ENST00000514093 FBXW2Q9UKT8 454 aa18.95■□□□□ 0.62
SQSTM1-215ENST00000514093 TRBV11-1A0A0K0K1C0 115 aa18.94■□□□□ 0.62
SQSTM1-215ENST00000514093 BTNL10A8MVZ5 291 aa18.94■□□□□ 0.62
SQSTM1-215ENST00000514093 ITGA10O75578 1167 aa18.94■□□□□ 0.62
SQSTM1-215ENST00000514093 SERPIND1P05546 499 aa18.94■□□□□ 0.62
SQSTM1-215ENST00000514093 MPC1LP0DKB6 136 aa18.94■□□□□ 0.62
SQSTM1-215ENST00000514093 GLI4P10075 376 aa18.94■□□□□ 0.62
SQSTM1-215ENST00000514093 CDH1P12830 882 aa18.94■□□□□ 0.62
SQSTM1-215ENST00000514093 JAK1P23458 1154 aa18.94■□□□□ 0.62
SQSTM1-215ENST00000514093 ACVR2AP27037 513 aa18.94■□□□□ 0.62
SQSTM1-215ENST00000514093 ZFP36L2P47974 494 aaKnown RBP18.94■□□□□ 0.62
SQSTM1-215ENST00000514093 MEF2AQ02078 507 aaPredicted RBP18.94■□□□□ 0.62
SQSTM1-215ENST00000514093 PLGLB1Q02325 96 aa18.94■□□□□ 0.62
SQSTM1-215ENST00000514093 PAOXQ6QHF9 649 aa18.94■□□□□ 0.62
SQSTM1-215ENST00000514093 MBOAT1Q6ZNC8 495 aa18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms